RNA–Protein interactions for RNA: ENST00000510884.5

NUP54-210, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-210ENST00000510884 ATP4BP51164 291 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 CRISP3P54108 245 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 RBM11P57052 281 aaKnown RBP4.06□□□□□ -1.76
NUP54-210ENST00000510884 KRTAP10-8P60410 259 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 PPP1CBP62140 327 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 PMAIP1Q13794 54 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 C1DQ13901 141 aaKnown RBP4.06□□□□□ -1.76
NUP54-210ENST00000510884 VGLL4Q14135 290 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 SPATA45Q537H7 98 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 UBE2NLQ5JXB2 153 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 Q6AWC8 147 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 TMEM207Q6UWW9 146 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 GAPTQ8N292 157 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 TOMM5Q8N4H5 51 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 POM121L12Q8N7R1 296 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 ZNF709Q8N972 641 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 NUP35Q8NFH5 326 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 OR2T33Q8NG76 320 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 VSTM2AQ8TAG5 236 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 ZNF502Q8TBZ5 544 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 PIFOQ8TCI5 191 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 GATAD1Q8WUU5 269 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 SSMEM1Q8WWF3 244 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 COPS9Q8WXC6 57 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 SEC22AQ96IW7 307 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 LINC00477Q96M19 166 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 SCGB3A2Q96PL1 93 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 YPEL2Q96QA6 119 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 SLC25A21Q9BQT8 299 aaPredicted RBP4.06□□□□□ -1.76
NUP54-210ENST00000510884 HES7Q9BYE0 225 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 ISG20L2Q9H9L3 353 aaKnown RBP4.06□□□□□ -1.76
NUP54-210ENST00000510884 TAS2R5Q9NYW4 299 aa4.06□□□□□ -1.76
NUP54-210ENST00000510884 KLF13Q9Y2Y9 288 aaPredicted RBP4.06□□□□□ -1.76
NUP54-210ENST00000510884 FER1L6Q2WGJ9 1857 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 TANC1Q9C0D5 1861 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 A0A1B0GTH9 108 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 A0A1W2PPK0 400 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 ODAMA1E959 279 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 ARRDC5A6NEK1 342 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 LYRM9A8MSI8 78 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 ISLRO14498 428 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 NPIPB7O75200 414 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 DEDDO75618 318 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 C1orf105O95561 183 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 HRASP01112 189 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 KRASP01116 189 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 IGHG2P01859 326 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 BCL2P10415 239 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 FAUP35544 74 aaKnown RBP4.05□□□□□ -1.76
NUP54-210ENST00000510884 RBMXP38159 391 aaKnown RBP4.05□□□□□ -1.76
NUP54-210ENST00000510884 ZNF83P51522 516 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 YPEL3P61236 119 aaPredicted RBP4.05□□□□□ -1.76
NUP54-210ENST00000510884 RPL18AQ02543 176 aaKnown RBP4.05□□□□□ -1.76
NUP54-210ENST00000510884 IHHQ14623 411 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 ZNF146Q15072 292 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 TDRG1Q3Y452 100 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 PHLDA2Q53GA4 152 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 FAM182AQ5T1J6 154 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 IBA57Q5T440 356 aaKnown RBP4.05□□□□□ -1.76
NUP54-210ENST00000510884 DCAF12Q5T6F0 453 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 LYRM7Q5U5X0 104 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 TMEM64Q6YI46 380 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 OR10P1Q8NGE3 313 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 OR5D14Q8NGL3 314 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 OR4C16Q8NGL9 310 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 OR51H1Q8NH63 302 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 SCGB1C1Q8TD33 95 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 C2orf15Q8WU43 125 aaKnown RBP4.05□□□□□ -1.76
NUP54-210ENST00000510884 CT55Q8WUE5 264 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 MAL2Q969L2 176 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 PGLYRP3Q96LB9 341 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 MRPL20Q9BYC9 149 aaKnown RBP4.05□□□□□ -1.76
NUP54-210ENST00000510884 TMEM222Q9H0R3 208 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 GABARAPL1Q9H0R8 117 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 COQ4Q9Y3A0 265 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 R4GN57 208 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 CASP8AP2Q9UKL3 1982 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 FRMPD3Q5JV73 1810 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 SBF2Q86WG5 1849 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 KIF13BQ9NQT8 1826 aa4.05□□□□□ -1.76
NUP54-210ENST00000510884 TLCD2A6NGC4 264 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 OR2T8A6NH00 312 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 M0R1B8 84 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 OVOL1O14753 267 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 UQCRQO14949 82 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 ARPC2O15144 300 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 PITX3O75364 302 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 CDK2AP2O75956 126 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 HSPB1P04792 205 aaKnown RBP4.04□□□□□ -1.76
NUP54-210ENST00000510884 OR9G9P0C7N8 305 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 LINC00694P0DN24 101 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 PIPP12273 146 aaPredicted RBP4.04□□□□□ -1.76
NUP54-210ENST00000510884 SFTPDP35247 375 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 REG1BP48304 166 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 FBXW4P57775 412 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 RPS24P62847 133 aaKnown RBP4.04□□□□□ -1.76
NUP54-210ENST00000510884 PLGLB1Q02325 96 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 OR1C1Q15619 314 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 OR7A5Q15622 319 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 CD226Q15762 336 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms