RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 RTL8CO15255 209 aa11.59□□□□□ -0.55
CXCL1-202ENST00000509101 ST8SIA3O43173 380 aa11.59□□□□□ -0.55
CXCL1-202ENST00000509101 SNAPC5O75971 98 aa11.59□□□□□ -0.55
CXCL1-202ENST00000509101 KRASP01116 189 aa11.59□□□□□ -0.55
CXCL1-202ENST00000509101 IGHV3-48P01763 117 aa11.59□□□□□ -0.55
CXCL1-202ENST00000509101 G6PCP35575 357 aa11.59□□□□□ -0.55
CXCL1-202ENST00000509101 MFAP4P55083 255 aa11.59□□□□□ -0.55
CXCL1-202ENST00000509101 HERV-K104P61576 105 aa11.59□□□□□ -0.55
CXCL1-202ENST00000509101 NCS1P62166 190 aa11.59□□□□□ -0.55
CXCL1-202ENST00000509101 PVRIGQ6DKI7 326 aa11.59□□□□□ -0.55
CXCL1-202ENST00000509101 OR1P1Q8NH06 330 aa11.59□□□□□ -0.55
CXCL1-202ENST00000509101 TMEM56Q96MV1 263 aa11.59□□□□□ -0.55
CXCL1-202ENST00000509101 GINS3Q9BRX5 216 aa11.59□□□□□ -0.55
CXCL1-202ENST00000509101 IGHV3-66A0A0C4DH42 116 aa11.58□□□□□ -0.56
CXCL1-202ENST00000509101 DBX1A6NMT0 343 aa11.58□□□□□ -0.56
CXCL1-202ENST00000509101 I3L2K1 104 aa11.58□□□□□ -0.56
CXCL1-202ENST00000509101 M0R2N4 97 aa11.58□□□□□ -0.56
CXCL1-202ENST00000509101 DFFBO76075 338 aa11.58□□□□□ -0.56
CXCL1-202ENST00000509101 APOHP02749 345 aaPredicted RBP11.58□□□□□ -0.56
CXCL1-202ENST00000509101 GIG44P09565 113 aaPredicted RBP11.58□□□□□ -0.56
CXCL1-202ENST00000509101 MIFP14174 115 aa11.58□□□□□ -0.56
CXCL1-202ENST00000509101 C4BPBP20851 252 aa11.58□□□□□ -0.56
CXCL1-202ENST00000509101 F2RP25116 425 aa11.58□□□□□ -0.56
CXCL1-202ENST00000509101 GNRHRP30968 328 aa11.58□□□□□ -0.56
CXCL1-202ENST00000509101 LPAR6P43657 344 aa11.58□□□□□ -0.56
CXCL1-202ENST00000509101 RPL11P62913 178 aaKnown RBP11.58□□□□□ -0.56
CXCL1-202ENST00000509101 CENPSQ8N2Z9 138 aa11.58□□□□□ -0.56
CXCL1-202ENST00000509101 LILRB2Q8N423 598 aa11.58□□□□□ -0.56
CXCL1-202ENST00000509101 FCAMRQ8WWV6 532 aa11.58□□□□□ -0.56
CXCL1-202ENST00000509101 RNF126Q9BV68 326 aa11.58□□□□□ -0.56
CXCL1-202ENST00000509101 NAA50Q9GZZ1 169 aaKnown RBP11.58□□□□□ -0.56
CXCL1-202ENST00000509101 RABAC1Q9UI14 185 aa11.58□□□□□ -0.56
CXCL1-202ENST00000509101 ELOA3CA0A087WX78 387 aaPredicted RBP11.57□□□□□ -0.56
CXCL1-202ENST00000509101 MEIS3P1A6NDR6 274 aa11.57□□□□□ -0.56
CXCL1-202ENST00000509101 GNG7O60262 68 aa11.57□□□□□ -0.56
CXCL1-202ENST00000509101 MT-CO2P00403 227 aa11.57□□□□□ -0.56
CXCL1-202ENST00000509101 AMBPP02760 352 aa11.57□□□□□ -0.56
CXCL1-202ENST00000509101 CD5P06127 495 aa11.57□□□□□ -0.56
CXCL1-202ENST00000509101 VBP1P61758 197 aa11.57□□□□□ -0.56
CXCL1-202ENST00000509101 ZNF767PQ75MW2 155 aa11.57□□□□□ -0.56
CXCL1-202ENST00000509101 PINX1Q96BK5 328 aaKnown RBP11.57□□□□□ -0.56
CXCL1-202ENST00000509101 TXN2Q99757 166 aa11.57□□□□□ -0.56
CXCL1-202ENST00000509101 VSIRQ9H7M9 311 aa11.57□□□□□ -0.56
CXCL1-202ENST00000509101 PRNDQ9UKY0 176 aa11.57□□□□□ -0.56
CXCL1-202ENST00000509101 CELA1Q9UNI1 258 aa11.57□□□□□ -0.56
CXCL1-202ENST00000509101 ZNF705EA8MWA4 302 aaPredicted RBP11.56□□□□□ -0.56
CXCL1-202ENST00000509101 TOMM20LQ6UXN7 152 aa11.56□□□□□ -0.56
CXCL1-202ENST00000509101 TRPT1Q86TN4 253 aaKnown RBP11.56□□□□□ -0.56
CXCL1-202ENST00000509101 POM121L12Q8N7R1 296 aa11.56□□□□□ -0.56
CXCL1-202ENST00000509101 OR5AP2Q8NGF4 316 aa11.56□□□□□ -0.56
CXCL1-202ENST00000509101 BORCS5Q969J3 196 aa11.56□□□□□ -0.56
CXCL1-202ENST00000509101 TMEM14BQ9NUH8 114 aa11.56□□□□□ -0.56
CXCL1-202ENST00000509101 X6R8D5 127 aa11.56□□□□□ -0.56
CXCL1-202ENST00000509101 DEFB131BA0A096LNP1 70 aa11.55□□□□□ -0.56
CXCL1-202ENST00000509101 TRAV2A0A0B4J234 112 aa11.55□□□□□ -0.56
CXCL1-202ENST00000509101 PGLYRP1O75594 196 aaPredicted RBP11.55□□□□□ -0.56
CXCL1-202ENST00000509101 P0DMU3 169 aa11.55□□□□□ -0.56
CXCL1-202ENST00000509101 FAM231AP0DMU4 169 aa11.55□□□□□ -0.56
CXCL1-202ENST00000509101 FAM231CP0DMU5 169 aa11.55□□□□□ -0.56
CXCL1-202ENST00000509101 SPP1P10451 314 aa11.55□□□□□ -0.56
CXCL1-202ENST00000509101 SCAND1P57086 179 aa11.55□□□□□ -0.56
CXCL1-202ENST00000509101 TMEM41BQ5BJD5 291 aa11.55□□□□□ -0.56
CXCL1-202ENST00000509101 DUSP18Q8NEJ0 188 aa11.55□□□□□ -0.56
CXCL1-202ENST00000509101 KRTAP4-5Q9BYR2 181 aa11.55□□□□□ -0.56
CXCL1-202ENST00000509101 AUNIPQ9H7T9 357 aa11.55□□□□□ -0.56
CXCL1-202ENST00000509101 ZFAND3Q9H8U3 227 aa11.55□□□□□ -0.56
CXCL1-202ENST00000509101 CLEC5AQ9NY25 188 aa11.55□□□□□ -0.56
CXCL1-202ENST00000509101 FKBP11Q9NYL4 201 aa11.55□□□□□ -0.56
CXCL1-202ENST00000509101 EHFQ9NZC4 300 aa11.55□□□□□ -0.56
CXCL1-202ENST00000509101 KNCNA6PVL3 124 aa11.54□□□□□ -0.56
CXCL1-202ENST00000509101 ALDH3B2P48448 385 aa11.54□□□□□ -0.56
CXCL1-202ENST00000509101 MORN3Q6PF18 240 aaPredicted RBP11.54□□□□□ -0.56
CXCL1-202ENST00000509101 STXBP6Q8NFX7 210 aa11.54□□□□□ -0.56
CXCL1-202ENST00000509101 ZNF2Q9BSG1 426 aaPredicted RBP11.54□□□□□ -0.56
CXCL1-202ENST00000509101 SCRT1Q9BWW7 348 aa11.54□□□□□ -0.56
CXCL1-202ENST00000509101 MRPS26Q9BYN8 205 aaKnown RBP11.54□□□□□ -0.56
CXCL1-202ENST00000509101 FXYD6Q9H0Q3 95 aa11.54□□□□□ -0.56
CXCL1-202ENST00000509101 IFT46Q9NQC8 304 aa11.54□□□□□ -0.56
CXCL1-202ENST00000509101 PUS1Q9Y606 427 aaKnown RBP eCLIP11.54□□□□□ -0.56
CXCL1-202ENST00000509101 HSPG2P98160 4391 aa11.53□□□□□ -0.56
CXCL1-202ENST00000509101 ZNF688P0C7X2 276 aa11.53□□□□□ -0.56
CXCL1-202ENST00000509101 CBX5P45973 191 aa11.53□□□□□ -0.56
CXCL1-202ENST00000509101 CTF1Q16619 201 aa11.53□□□□□ -0.56
CXCL1-202ENST00000509101 C12orf74Q32Q52 190 aa11.53□□□□□ -0.56
CXCL1-202ENST00000509101 GPR107Q5VW38 600 aa11.53□□□□□ -0.56
CXCL1-202ENST00000509101 ZNF600Q6ZNG1 722 aa11.53□□□□□ -0.56
CXCL1-202ENST00000509101 ZNF575Q86XF7 245 aa11.53□□□□□ -0.56
CXCL1-202ENST00000509101 CROCCP3Q8IVE0 287 aa11.53□□□□□ -0.56
CXCL1-202ENST00000509101 CADM3Q8N126 398 aa11.53□□□□□ -0.56
CXCL1-202ENST00000509101 ZNF114Q8NC26 417 aa11.53□□□□□ -0.56
CXCL1-202ENST00000509101 MOB3AQ96BX8 217 aa11.53□□□□□ -0.56
CXCL1-202ENST00000509101 TSC22D3Q99576 134 aa11.53□□□□□ -0.56
CXCL1-202ENST00000509101 TMEM231Q9H6L2 316 aa11.53□□□□□ -0.56
CXCL1-202ENST00000509101 TBC1D24Q9ULP9 559 aa11.53□□□□□ -0.56
CXCL1-202ENST00000509101 A0A0A6YYH2 397 aa11.52□□□□□ -0.57
CXCL1-202ENST00000509101 A6NJ64 397 aa11.52□□□□□ -0.57
CXCL1-202ENST00000509101 K7EQG2 157 aa11.52□□□□□ -0.57
CXCL1-202ENST00000509101 TMEM127O75204 238 aa11.52□□□□□ -0.57
CXCL1-202ENST00000509101 GABARAPO95166 117 aa11.52□□□□□ -0.57
CXCL1-202ENST00000509101 RFX2P48378 723 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms