RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 HCFC1R1Q9NWW0 138 aa3.74□□□□□ -1.81
PDLIM5-211ENST00000508531 MED29Q9NX70 200 aa3.74□□□□□ -1.81
PDLIM5-211ENST00000508531 HSPB8Q9UJY1 196 aa3.74□□□□□ -1.81
PDLIM5-211ENST00000508531 BOKQ9UMX3 212 aaPredicted RBP3.74□□□□□ -1.81
PDLIM5-211ENST00000508531 ZNF257Q9Y2Q1 563 aa3.74□□□□□ -1.81
PDLIM5-211ENST00000508531 YTHDF2Q9Y5A9 579 aaKnown RBP3.74□□□□□ -1.81
PDLIM5-211ENST00000508531 SOX21Q9Y651 276 aaPredicted RBP3.74□□□□□ -1.81
PDLIM5-211ENST00000508531 KCNE3Q9Y6H6 103 aa3.74□□□□□ -1.81
PDLIM5-211ENST00000508531 ANAPC1Q9H1A4 1944 aa3.74□□□□□ -1.81
PDLIM5-211ENST00000508531 CFAP46Q8IYW2 2715 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 SCN3AQ9NY46 2000 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 UBR5O95071 2799 aaPredicted RBP3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 TRAV36DV7A0A075B6V5 113 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 A0A0G2JLM5 398 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 TRBV7-9A0A0J9YWB2 115 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 A0A0J9YY10 115 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 KIR2DS1A0A191URI9 304 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 A0A1B0GX78 115 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 A0A1W2PPV4 95 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 A0A1W2PS18 150 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 IGLON5A6NGN9 336 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 GLOD5A6NK44 160 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 FAM90A7PA6NKC0 464 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 FOXI3A8MTJ6 420 aaPredicted RBP3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 FAM90A22PA8MWA6 464 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 FAM90A12PA8MX19 464 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 FAM90A23PA8MXZ1 464 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 PRR32B1ATL7 298 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 TMEM262E9PQX1 116 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 H0Y980 276 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 IFNL4K9M1U5 179 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 M0R2Z0 102 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 ISLRO14498 428 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 SLC16A7O60669 478 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 IGHG4P01861 327 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 TTRP02766 147 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 HNRNPA1P09651 372 aaKnown RBP eCLIP3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 CCL1P22362 96 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 KIR2DS4P43632 304 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 DUSP3P51452 185 aaPredicted RBP3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 TMEM50BP56557 158 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 GRB2P62993 217 aaKnown RBP3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 CX3CL1P78423 397 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 RPL18Q07020 188 aaKnown RBP3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 AESQ08117 197 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 KLF5Q13887 457 aaPredicted RBP3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 LY6DQ14210 128 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 ELAVL3Q14576 367 aaKnown RBP3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 KIR2DS1Q14954 304 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 GABRA6Q16445 453 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 LYRM7Q5U5X0 104 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 CARD17Q5XLA6 110 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 ASPHD2Q6ICH7 369 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 TMEM211Q6ICI0 200 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 ATP5L2Q7Z4Y8 100 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 HMGN2P46Q86SG4 172 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 S100A7AQ86SG5 101 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 DOLPP1Q86YN1 238 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 LINC01555Q8NAE3 123 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 OR13A1Q8NGR1 328 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 OR51E1Q8TCB6 317 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 NT5CQ8TCD5 201 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 LMX1AQ8TE12 382 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 GALMQ96C23 342 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 HARBI1Q96MB7 349 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 FAM103A1Q9BTL3 118 aaKnown RBP3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 APOOQ9BUR5 198 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 TMEM147Q9BVK8 224 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 MAP1LC3CQ9BXW4 147 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 KCNK15Q9H427 330 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 PRORYQ9H606 182 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 GNB4Q9HAV0 340 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 ZNF160Q9HCG1 818 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 ZNF331Q9NQX6 463 aaPredicted RBP3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 OSTCQ9NRP0 149 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 STARD5Q9NSY2 213 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 ZNF391Q9UJN7 358 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 PILRBQ9UKJ0 227 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 ERG28Q9UKR5 140 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 HEBP2Q9Y5Z4 205 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 SPCS1Q9Y6A9 102 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 HEATR5AQ86XA9 2040 aa3.73□□□□□ -1.81
PDLIM5-211ENST00000508531 ITPR3Q14573 2671 aa3.72□□□□□ -1.81
PDLIM5-211ENST00000508531 DENND4CQ5VZ89 1909 aa3.72□□□□□ -1.81
PDLIM5-211ENST00000508531 RELNP78509 3460 aa3.72□□□□□ -1.81
PDLIM5-211ENST00000508531 IGLV1-36A0A0B4J1U3 117 aa3.72□□□□□ -1.81
PDLIM5-211ENST00000508531 MUC21A0A0G2JKD1 596 aa3.72□□□□□ -1.81
PDLIM5-211ENST00000508531 MUC21A0A140T8X8 626 aa3.72□□□□□ -1.81
PDLIM5-211ENST00000508531 A0A1W2PPM0 123 aa3.72□□□□□ -1.81
PDLIM5-211ENST00000508531 ODAMA1E959 279 aa3.72□□□□□ -1.81
PDLIM5-211ENST00000508531 TMEM213A2RRL7 107 aa3.72□□□□□ -1.81
PDLIM5-211ENST00000508531 GRIFINA4D1Z8 144 aa3.72□□□□□ -1.81
PDLIM5-211ENST00000508531 ZNF840PA6NDX5 716 aa3.72□□□□□ -1.81
PDLIM5-211ENST00000508531 OR4C46A6NHA9 309 aa3.72□□□□□ -1.81
PDLIM5-211ENST00000508531 LRRC30A6NM36 301 aa3.72□□□□□ -1.81
PDLIM5-211ENST00000508531 F5H5K5 113 aa3.72□□□□□ -1.81
PDLIM5-211ENST00000508531 WNT9BO14905 357 aa3.72□□□□□ -1.81
PDLIM5-211ENST00000508531 SOCS1O15524 211 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms