RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 G6PCP35575 357 aa0.97□□□□□ -2.25
LSM6-205ENST00000507449 CDK5R1Q15078 307 aa0.97□□□□□ -2.25
LSM6-205ENST00000507449 NDUFA5Q16718 116 aa0.97□□□□□ -2.25
LSM6-205ENST00000507449 RGS21Q2M5E4 152 aa0.97□□□□□ -2.25
LSM6-205ENST00000507449 Q6ZQT0 140 aa0.97□□□□□ -2.25
LSM6-205ENST00000507449 BPIFA4PQ86YQ2 179 aa0.97□□□□□ -2.25
LSM6-205ENST00000507449 CLVS1Q8IUQ0 354 aaPredicted RBP0.97□□□□□ -2.25
LSM6-205ENST00000507449 OR52R1Q8NGF1 315 aa0.97□□□□□ -2.25
LSM6-205ENST00000507449 C10orf105Q8TEF2 133 aa0.97□□□□□ -2.25
LSM6-205ENST00000507449 TMEM106AQ96A25 262 aa0.97□□□□□ -2.25
LSM6-205ENST00000507449 TOMM6Q96B49 74 aa0.97□□□□□ -2.25
LSM6-205ENST00000507449 YIPF3Q9GZM5 350 aa0.97□□□□□ -2.25
LSM6-205ENST00000507449 TMEM56-RWDD3S4R434 201 aa0.97□□□□□ -2.25
LSM6-205ENST00000507449 LAMB2P55268 1798 aa0.97□□□□□ -2.25
LSM6-205ENST00000507449 PRRC2BQ5JSZ5 2229 aaKnown RBP0.97□□□□□ -2.25
LSM6-205ENST00000507449 BAZ2BQ9UIF8 2168 aaKnown RBP0.96□□□□□ -2.26
LSM6-205ENST00000507449 IGKV1D-42A0A075B6H8 117 aa0.96□□□□□ -2.26
LSM6-205ENST00000507449 IGKV3D-7A0A0C4DH55 119 aa0.96□□□□□ -2.26
LSM6-205ENST00000507449 IGKV3OR2-268A0A0C4DH90 116 aa0.96□□□□□ -2.26
LSM6-205ENST00000507449 DPRXA6NFQ7 191 aa0.96□□□□□ -2.26
LSM6-205ENST00000507449 RPP14O95059 124 aaKnown RBP0.96□□□□□ -2.26
LSM6-205ENST00000507449 RNASE3P12724 160 aaKnown RBP0.96□□□□□ -2.26
LSM6-205ENST00000507449 CDKN2CP42773 168 aa0.96□□□□□ -2.26
LSM6-205ENST00000507449 OMPP47874 163 aa0.96□□□□□ -2.26
LSM6-205ENST00000507449 STX5Q13190 355 aa0.96□□□□□ -2.26
LSM6-205ENST00000507449 SPANXN3Q5MJ09 141 aa0.96□□□□□ -2.26
LSM6-205ENST00000507449 ZNF565Q8N9K5 539 aa0.96□□□□□ -2.26
LSM6-205ENST00000507449 MCFD2Q8NI22 146 aa0.96□□□□□ -2.26
LSM6-205ENST00000507449 DCUN1D1Q96GG9 259 aa0.96□□□□□ -2.26
LSM6-205ENST00000507449 SCGB3A1Q96QR1 104 aa0.96□□□□□ -2.26
LSM6-205ENST00000507449 TMEM147Q9BVK8 224 aa0.96□□□□□ -2.26
LSM6-205ENST00000507449 ULBP3Q9BZM4 244 aa0.96□□□□□ -2.26
LSM6-205ENST00000507449 COMMD5Q9GZQ3 224 aa0.96□□□□□ -2.26
LSM6-205ENST00000507449 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.96□□□□□ -2.26
LSM6-205ENST00000507449 STRCQ7RTU9 1775 aa0.96□□□□□ -2.26
LSM6-205ENST00000507449 RTTNQ86VV8 2226 aa0.95□□□□□ -2.26
LSM6-205ENST00000507449 OR2J2O76002 312 aa0.95□□□□□ -2.26
LSM6-205ENST00000507449 HTR1AP08908 422 aa0.95□□□□□ -2.26
LSM6-205ENST00000507449 FKBP2P26885 142 aaKnown RBP0.95□□□□□ -2.26
LSM6-205ENST00000507449 CDC42P60953 191 aa0.95□□□□□ -2.26
LSM6-205ENST00000507449 C10orf55Q5SWW7 151 aa0.95□□□□□ -2.26
LSM6-205ENST00000507449 SPOPLQ6IQ16 392 aa0.95□□□□□ -2.26
LSM6-205ENST00000507449 ZNF826PQ6ZT77 177 aa0.95□□□□□ -2.26
LSM6-205ENST00000507449 C12orf45Q8N5I9 185 aaPredicted RBP0.95□□□□□ -2.26
LSM6-205ENST00000507449 WFDC11Q8NEX6 87 aa0.95□□□□□ -2.26
LSM6-205ENST00000507449 DCSTAMPQ9H295 470 aa0.95□□□□□ -2.26
LSM6-205ENST00000507449 UCK1Q9HA47 277 aa0.95□□□□□ -2.26
LSM6-205ENST00000507449 MED13Q9UHV7 2174 aa0.94□□□□□ -2.26
LSM6-205ENST00000507449 TRAV9-1A0A075B6T8 112 aa0.94□□□□□ -2.26
LSM6-205ENST00000507449 CRYZL1O95825 349 aa0.94□□□□□ -2.26
LSM6-205ENST00000507449 SMIM10L2AP0DMW4 78 aa0.94□□□□□ -2.26
LSM6-205ENST00000507449 SMIM10L2BP0DMW5 78 aa0.94□□□□□ -2.26
LSM6-205ENST00000507449 SPI1P17947 270 aa0.94□□□□□ -2.26
LSM6-205ENST00000507449 CEBPGP53567 150 aa0.94□□□□□ -2.26
LSM6-205ENST00000507449 SURF2Q15527 256 aaPredicted RBP0.94□□□□□ -2.26
LSM6-205ENST00000507449 MIR17HGQ75NE6 70 aa0.94□□□□□ -2.26
LSM6-205ENST00000507449 AAED1Q7RTV5 226 aa0.94□□□□□ -2.26
LSM6-205ENST00000507449 MNS1Q8NEH6 495 aa0.94□□□□□ -2.26
LSM6-205ENST00000507449 PRAP1Q96NZ9 151 aa0.94□□□□□ -2.26
LSM6-205ENST00000507449 REG4Q9BYZ8 158 aa0.94□□□□□ -2.26
LSM6-205ENST00000507449 C20orf27Q9GZN8 174 aa0.94□□□□□ -2.26
LSM6-205ENST00000507449 RNASE7Q9H1E1 156 aaKnown RBP0.94□□□□□ -2.26
LSM6-205ENST00000507449 OR51V1Q9H2C8 321 aa0.94□□□□□ -2.26
LSM6-205ENST00000507449 C14orf105Q9NVL8 296 aa0.94□□□□□ -2.26
LSM6-205ENST00000507449 MED9Q9NWA0 146 aa0.94□□□□□ -2.26
LSM6-205ENST00000507449 CKLFQ9UBR5 152 aa0.94□□□□□ -2.26
LSM6-205ENST00000507449 PRELID3BQ9Y3B1 194 aa0.94□□□□□ -2.26
LSM6-205ENST00000507449 TOPBP1Q92547 1522 aa0.94□□□□□ -2.26
LSM6-205ENST00000507449 TENM1Q9UKZ4 2725 aa0.94□□□□□ -2.26
LSM6-205ENST00000507449 NEO1Q92859 1461 aa0.93□□□□□ -2.26
LSM6-205ENST00000507449 HCRTO43612 131 aa0.93□□□□□ -2.26
LSM6-205ENST00000507449 ARL14EPLP0DKL9 152 aa0.93□□□□□ -2.26
LSM6-205ENST00000507449 IAH1Q2TAA2 248 aaPredicted RBP0.93□□□□□ -2.26
LSM6-205ENST00000507449 C12orf74Q32Q52 190 aa0.93□□□□□ -2.26
LSM6-205ENST00000507449 RPS19BP1Q86WX3 136 aaKnown RBP0.93□□□□□ -2.26
LSM6-205ENST00000507449 OR5A1Q8NGJ0 315 aa0.93□□□□□ -2.26
LSM6-205ENST00000507449 DNAJC9Q8WXX5 260 aa0.93□□□□□ -2.26
LSM6-205ENST00000507449 PPP1R14BQ96C90 147 aa0.93□□□□□ -2.26
LSM6-205ENST00000507449 IDI2-AS1Q9NZ38 188 aa0.93□□□□□ -2.26
LSM6-205ENST00000507449 ERGIC3Q9Y282 383 aa0.93□□□□□ -2.26
LSM6-205ENST00000507449 SOX21Q9Y651 276 aaPredicted RBP0.93□□□□□ -2.26
LSM6-205ENST00000507449 MYH11P35749 1972 aa0.93□□□□□ -2.26
LSM6-205ENST00000507449 FREM1Q5H8C1 2179 aa0.93□□□□□ -2.26
LSM6-205ENST00000507449 HEATR5AQ86XA9 2040 aa0.93□□□□□ -2.26
LSM6-205ENST00000507449 CCDC144AA2RUR9 1427 aa0.92□□□□□ -2.26
LSM6-205ENST00000507449 IGKV3-7A0A075B6H7 116 aa0.92□□□□□ -2.26
LSM6-205ENST00000507449 IGKV2-40A0A087WW87 121 aaPredicted RBP0.92□□□□□ -2.26
LSM6-205ENST00000507449 hADV38S2A0JD32 116 aa0.92□□□□□ -2.26
LSM6-205ENST00000507449 ZNF682O95780 498 aa0.92□□□□□ -2.26
LSM6-205ENST00000507449 HAND1O96004 215 aa0.92□□□□□ -2.26
LSM6-205ENST00000507449 IFNA10P01566 189 aa0.92□□□□□ -2.26
LSM6-205ENST00000507449 IGKV2D-40P01614 121 aaPredicted RBP0.92□□□□□ -2.26
LSM6-205ENST00000507449 ASAH2BP0C7U1 165 aa0.92□□□□□ -2.26
LSM6-205ENST00000507449 ERVS71-1P61550 626 aa0.92□□□□□ -2.26
LSM6-205ENST00000507449 SRSF6Q13247 344 aaKnown RBP0.92□□□□□ -2.26
LSM6-205ENST00000507449 EDDM3AQ14507 147 aa0.92□□□□□ -2.26
LSM6-205ENST00000507449 CDK10Q15131 360 aa0.92□□□□□ -2.26
LSM6-205ENST00000507449 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.92□□□□□ -2.26
LSM6-205ENST00000507449 DEFB128Q7Z7B8 93 aa0.92□□□□□ -2.26
LSM6-205ENST00000507449 SIGLECL1Q8N7X8 197 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms