RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 A0A0G2JRQ6 117 aa7.28□□□□□ -1.24
CLCN3-205ENST00000506924 C15orf61A6NNL5 157 aa7.28□□□□□ -1.24
CLCN3-205ENST00000506924 NPIPB5A8MRT5 1133 aa7.28□□□□□ -1.24
CLCN3-205ENST00000506924 LINC01619G3V211 115 aa7.28□□□□□ -1.24
CLCN3-205ENST00000506924 OR13C7P0DN81 318 aa7.28□□□□□ -1.24
CLCN3-205ENST00000506924 CTRB1P17538 263 aa7.28□□□□□ -1.24
CLCN3-205ENST00000506924 UCP1P25874 307 aa7.28□□□□□ -1.24
CLCN3-205ENST00000506924 ELLP55199 621 aaPredicted RBP7.28□□□□□ -1.24
CLCN3-205ENST00000506924 RUNX1Q01196 453 aa7.28□□□□□ -1.24
CLCN3-205ENST00000506924 ATP5G2Q06055 141 aa7.28□□□□□ -1.24
CLCN3-205ENST00000506924 WT1-ASQ06250 92 aa7.28□□□□□ -1.24
CLCN3-205ENST00000506924 TMEM268Q5VZI3 342 aa7.28□□□□□ -1.24
CLCN3-205ENST00000506924 CTRB2Q6GPI1 263 aa7.28□□□□□ -1.24
CLCN3-205ENST00000506924 SLC25A42Q86VD7 318 aa7.28□□□□□ -1.24
CLCN3-205ENST00000506924 SGPP2Q8IWX5 399 aa7.28□□□□□ -1.24
CLCN3-205ENST00000506924 SELENOHQ8IZQ5 122 aaKnown RBP7.28□□□□□ -1.24
CLCN3-205ENST00000506924 OR1L8Q8NGR8 309 aa7.28□□□□□ -1.24
CLCN3-205ENST00000506924 DCUN1D4Q92564 292 aa7.28□□□□□ -1.24
CLCN3-205ENST00000506924 DLX4Q92988 240 aaPredicted RBP7.28□□□□□ -1.24
CLCN3-205ENST00000506924 SCGB3A2Q96PL1 93 aa7.28□□□□□ -1.24
CLCN3-205ENST00000506924 TMEM222Q9H0R3 208 aa7.28□□□□□ -1.24
CLCN3-205ENST00000506924 NDUFA4L2Q9NRX3 87 aa7.28□□□□□ -1.24
CLCN3-205ENST00000506924 PRNDQ9UKY0 176 aa7.28□□□□□ -1.24
CLCN3-205ENST00000506924 ZNF257Q9Y2Q1 563 aa7.28□□□□□ -1.24
CLCN3-205ENST00000506924 TRBV9A0A0B4J1U6 114 aa7.27□□□□□ -1.25
CLCN3-205ENST00000506924 IGHV3-21A0A0B4J1V1 117 aa7.27□□□□□ -1.25
CLCN3-205ENST00000506924 A0A0B4J293 547 aa7.27□□□□□ -1.25
CLCN3-205ENST00000506924 CDS2O95674 445 aa7.27□□□□□ -1.25
CLCN3-205ENST00000506924 HSPB1P04792 205 aaKnown RBP7.27□□□□□ -1.25
CLCN3-205ENST00000506924 CRYGCP07315 174 aa7.27□□□□□ -1.25
CLCN3-205ENST00000506924 OR8U8P0C7N1 319 aa7.27□□□□□ -1.25
CLCN3-205ENST00000506924 SUPT4H1P63272 117 aaKnown RBP7.27□□□□□ -1.25
CLCN3-205ENST00000506924 FHL3Q13643 280 aa7.27□□□□□ -1.25
CLCN3-205ENST00000506924 EXOSC2Q13868 293 aaKnown RBP7.27□□□□□ -1.25
CLCN3-205ENST00000506924 TMEM187Q14656 261 aa7.27□□□□□ -1.25
CLCN3-205ENST00000506924 C15orf32Q32M92 178 aa7.27□□□□□ -1.25
CLCN3-205ENST00000506924 CCDC28AQ8IWP9 274 aa7.27□□□□□ -1.25
CLCN3-205ENST00000506924 RRNAD1Q96FB5 475 aaKnown RBP7.27□□□□□ -1.25
CLCN3-205ENST00000506924 TSC22D3Q99576 134 aa7.27□□□□□ -1.25
CLCN3-205ENST00000506924 WDR12Q9GZL7 423 aaKnown RBP7.27□□□□□ -1.25
CLCN3-205ENST00000506924 ZC4H2Q9NQZ6 224 aa7.27□□□□□ -1.25
CLCN3-205ENST00000506924 TMEM14BQ9NUH8 114 aa7.27□□□□□ -1.25
CLCN3-205ENST00000506924 FLVCR2Q9UPI3 526 aa7.27□□□□□ -1.25
CLCN3-205ENST00000506924 NOTCH3Q9UM47 2321 aa7.26□□□□□ -1.25
CLCN3-205ENST00000506924 FAM223BA6NKX1 122 aa7.26□□□□□ -1.25
CLCN3-205ENST00000506924 SEC14L6B5MCN3 397 aa7.26□□□□□ -1.25
CLCN3-205ENST00000506924 PPP5D1E7EU14 171 aa7.26□□□□□ -1.25
CLCN3-205ENST00000506924 PLA2G10O15496 165 aa7.26□□□□□ -1.25
CLCN3-205ENST00000506924 ST8SIA3O43173 380 aa7.26□□□□□ -1.25
CLCN3-205ENST00000506924 ATG12O94817 140 aa7.26□□□□□ -1.25
CLCN3-205ENST00000506924 IFNA17P01571 189 aa7.26□□□□□ -1.25
CLCN3-205ENST00000506924 HLA-AP01891 365 aaKnown RBP7.26□□□□□ -1.25
CLCN3-205ENST00000506924 P0C879 139 aa7.26□□□□□ -1.25
CLCN3-205ENST00000506924 MFAP2P55001 183 aa7.26□□□□□ -1.25
CLCN3-205ENST00000506924 KRTAP10-11P60412 298 aa7.26□□□□□ -1.25
CLCN3-205ENST00000506924 DHODHQ02127 395 aa7.26□□□□□ -1.25
CLCN3-205ENST00000506924 SLC25A24Q6NUK1 477 aa7.26□□□□□ -1.25
CLCN3-205ENST00000506924 ZNF343Q6P1L6 599 aa7.26□□□□□ -1.25
CLCN3-205ENST00000506924 FAM223AQ8IWN6 122 aa7.26□□□□□ -1.25
CLCN3-205ENST00000506924 SLC35G3Q8N808 338 aa7.26□□□□□ -1.25
CLCN3-205ENST00000506924 NECAP1Q8NC96 275 aa7.26□□□□□ -1.25
CLCN3-205ENST00000506924 OR5B3Q8NH48 314 aa7.26□□□□□ -1.25
CLCN3-205ENST00000506924 RBPMSQ93062 196 aaKnown RBP7.26□□□□□ -1.25
CLCN3-205ENST00000506924 LSM10Q969L4 123 aaKnown RBP7.26□□□□□ -1.25
CLCN3-205ENST00000506924 GPR146Q96CH1 333 aa7.26□□□□□ -1.25
CLCN3-205ENST00000506924 USMG5Q96IX5 58 aa7.26□□□□□ -1.25
CLCN3-205ENST00000506924 PRR25Q96S07 402 aa7.26□□□□□ -1.25
CLCN3-205ENST00000506924 SLC25A21Q9BQT8 299 aaPredicted RBP7.26□□□□□ -1.25
CLCN3-205ENST00000506924 BATF3Q9NR55 127 aa7.26□□□□□ -1.25
CLCN3-205ENST00000506924 FKBP11Q9NYL4 201 aa7.26□□□□□ -1.25
CLCN3-205ENST00000506924 PTTG2Q9NZH5 202 aa7.26□□□□□ -1.25
CLCN3-205ENST00000506924 PEF1Q9UBV8 284 aaKnown RBP7.26□□□□□ -1.25
CLCN3-205ENST00000506924 KCNIP3Q9Y2W7 256 aa7.26□□□□□ -1.25
CLCN3-205ENST00000506924 IGLV11-55A0A075B6I3 123 aa7.25□□□□□ -1.25
CLCN3-205ENST00000506924 NAP1L6A6NFF2 107 aa7.25□□□□□ -1.25
CLCN3-205ENST00000506924 MFSD2BA6NFX1 497 aa7.25□□□□□ -1.25
CLCN3-205ENST00000506924 CENPXA8MT69 81 aa7.25□□□□□ -1.25
CLCN3-205ENST00000506924 OVOL1O14753 267 aa7.25□□□□□ -1.25
CLCN3-205ENST00000506924 B3GALNT1O75752 331 aa7.25□□□□□ -1.25
CLCN3-205ENST00000506924 JTBO76095 146 aa7.25□□□□□ -1.25
CLCN3-205ENST00000506924 BRI3O95415 125 aa7.25□□□□□ -1.25
CLCN3-205ENST00000506924 DHFRP00374 187 aa7.25□□□□□ -1.25
CLCN3-205ENST00000506924 BTCP35070 178 aa7.25□□□□□ -1.25
CLCN3-205ENST00000506924 HSPE1P61604 102 aaKnown RBP7.25□□□□□ -1.25
CLCN3-205ENST00000506924 PPP1R1AQ13522 171 aa7.25□□□□□ -1.25
CLCN3-205ENST00000506924 RBMS2Q15434 407 aaKnown RBP7.25□□□□□ -1.25
CLCN3-205ENST00000506924 ANKRD55Q3KP44 614 aa7.25□□□□□ -1.25
CLCN3-205ENST00000506924 C4orf46Q504U0 113 aa7.25□□□□□ -1.25
CLCN3-205ENST00000506924 C11orf87Q6NUJ2 197 aa7.25□□□□□ -1.25
CLCN3-205ENST00000506924 CLEC19AQ6UXS0 136 aa7.25□□□□□ -1.25
CLCN3-205ENST00000506924 LYZL2Q7Z4W2 148 aa7.25□□□□□ -1.25
CLCN3-205ENST00000506924 HAPLN4Q86UW8 402 aa7.25□□□□□ -1.25
CLCN3-205ENST00000506924 CADM3Q8N126 398 aa7.25□□□□□ -1.25
CLCN3-205ENST00000506924 CENPSQ8N2Z9 138 aa7.25□□□□□ -1.25
CLCN3-205ENST00000506924 TMEM56Q96MV1 263 aa7.25□□□□□ -1.25
CLCN3-205ENST00000506924 RANGRFQ9HD47 186 aaPredicted RBP7.25□□□□□ -1.25
CLCN3-205ENST00000506924 CACNG5Q9UF02 275 aa7.25□□□□□ -1.25
CLCN3-205ENST00000506924 TMEM56-RWDD3S4R434 201 aa7.25□□□□□ -1.25
CLCN3-205ENST00000506924 NOTCH1P46531 2555 aa7.24□□□□□ -1.25
CLCN3-205ENST00000506924 MEGF8Q7Z7M0 2845 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms