RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 F8W735 103 aaPredicted RBP11.74□□□□□ -0.53
MED28-204ENST00000506409 INS-IGF2F8WCM5 200 aa11.74□□□□□ -0.53
MED28-204ENST00000506409 I3L2K1 104 aa11.74□□□□□ -0.53
MED28-204ENST00000506409 ETV6P41212 452 aa11.74□□□□□ -0.53
MED28-204ENST00000506409 Q6ZRM9 215 aa11.74□□□□□ -0.53
MED28-204ENST00000506409 UXS1Q8NBZ7 420 aa11.74□□□□□ -0.53
MED28-204ENST00000506409 TMEM190Q8WZ59 177 aa11.74□□□□□ -0.53
MED28-204ENST00000506409 MARC2Q969Z3 335 aa11.74□□□□□ -0.53
MED28-204ENST00000506409 PINX1Q96BK5 328 aaKnown RBP11.74□□□□□ -0.53
MED28-204ENST00000506409 CHRDL1Q9BU40 450 aa11.74□□□□□ -0.53
MED28-204ENST00000506409 ZNF436Q9C0F3 470 aaPredicted RBP11.74□□□□□ -0.53
MED28-204ENST00000506409 ENY2Q9NPA8 101 aa11.74□□□□□ -0.53
MED28-204ENST00000506409 GAR1Q9NY12 217 aaKnown RBP11.74□□□□□ -0.53
MED28-204ENST00000506409 A8MZ25 164 aa11.73□□□□□ -0.53
MED28-204ENST00000506409 MT-CO2P00403 227 aa11.73□□□□□ -0.53
MED28-204ENST00000506409 AKR1C4P17516 323 aa11.73□□□□□ -0.53
MED28-204ENST00000506409 MFAP4P55083 255 aa11.73□□□□□ -0.53
MED28-204ENST00000506409 ELLP55199 621 aaPredicted RBP11.73□□□□□ -0.53
MED28-204ENST00000506409 GUCA2BQ16661 112 aa11.73□□□□□ -0.53
MED28-204ENST00000506409 ZNF57Q68EA5 555 aaPredicted RBP11.73□□□□□ -0.53
MED28-204ENST00000506409 GALNT14Q96FL9 552 aa11.73□□□□□ -0.53
MED28-204ENST00000506409 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.73□□□□□ -0.53
MED28-204ENST00000506409 MLXQ9UH92 298 aa11.73□□□□□ -0.53
MED28-204ENST00000506409 SELENOKQ9Y6D0 94 aa11.73□□□□□ -0.53
MED28-204ENST00000506409 TMEM56-RWDD3S4R434 201 aa11.73□□□□□ -0.53
MED28-204ENST00000506409 ZNF785A8K8V0 405 aa11.72□□□□□ -0.53
MED28-204ENST00000506409 NDUFA4O00483 81 aa11.72□□□□□ -0.53
MED28-204ENST00000506409 NUPL2O15504 423 aaKnown RBP11.72□□□□□ -0.53
MED28-204ENST00000506409 IGHV3-48P01763 117 aa11.72□□□□□ -0.53
MED28-204ENST00000506409 CTSGP08311 255 aa11.72□□□□□ -0.53
MED28-204ENST00000506409 ADMP35318 185 aa11.72□□□□□ -0.53
MED28-204ENST00000506409 SUB1P53999 127 aaKnown RBP eCLIP11.72□□□□□ -0.53
MED28-204ENST00000506409 CD81P60033 236 aa11.72□□□□□ -0.53
MED28-204ENST00000506409 SPCS3P61009 180 aa11.72□□□□□ -0.53
MED28-204ENST00000506409 TMEM187Q14656 261 aa11.72□□□□□ -0.53
MED28-204ENST00000506409 BTNL8Q6UX41 500 aa11.72□□□□□ -0.53
MED28-204ENST00000506409 TMEM61Q8N0U2 210 aa11.72□□□□□ -0.53
MED28-204ENST00000506409 DEDD2Q8WXF8 326 aa11.72□□□□□ -0.53
MED28-204ENST00000506409 IL22RA2Q969J5 263 aa11.72□□□□□ -0.53
MED28-204ENST00000506409 GPR146Q96CH1 333 aa11.72□□□□□ -0.53
MED28-204ENST00000506409 WDR89Q96FK6 387 aaPredicted RBP11.72□□□□□ -0.53
MED28-204ENST00000506409 TXN2Q99757 166 aa11.72□□□□□ -0.53
MED28-204ENST00000506409 DAZ1Q9NQZ3 744 aaKnown RBP11.72□□□□□ -0.53
MED28-204ENST00000506409 C19orf73Q9NVV2 129 aa11.72□□□□□ -0.53
MED28-204ENST00000506409 PRR13Q9NZ81 148 aa11.72□□□□□ -0.53
MED28-204ENST00000506409 MRPL27Q9P0M9 148 aaKnown RBP11.72□□□□□ -0.53
MED28-204ENST00000506409 CACNG5Q9UF02 275 aa11.72□□□□□ -0.53
MED28-204ENST00000506409 C8orf88P0DMB2 117 aa11.71□□□□□ -0.53
MED28-204ENST00000506409 ANXA3P12429 323 aa11.71□□□□□ -0.53
MED28-204ENST00000506409 FCGR2BP31994 310 aaPredicted RBP11.71□□□□□ -0.53
MED28-204ENST00000506409 RELQ04864 619 aaPredicted RBP11.71□□□□□ -0.53
MED28-204ENST00000506409 AARDQ4LEZ3 155 aa11.71□□□□□ -0.53
MED28-204ENST00000506409 TMED4Q7Z7H5 227 aa11.71□□□□□ -0.53
MED28-204ENST00000506409 OR52E5Q8NH55 327 aa11.71□□□□□ -0.53
MED28-204ENST00000506409 WWC2-AS2Q96NR7 200 aa11.71□□□□□ -0.53
MED28-204ENST00000506409 NEURL2Q9BR09 285 aa11.71□□□□□ -0.53
MED28-204ENST00000506409 C20orf24Q9BUV8 137 aa11.71□□□□□ -0.53
MED28-204ENST00000506409 SRRQ9GZT4 340 aa11.71□□□□□ -0.53
MED28-204ENST00000506409 TUBA4BQ9H853 241 aa11.71□□□□□ -0.53
MED28-204ENST00000506409 IGHV3OR16-8A0A075B7F1 116 aa11.7□□□□□ -0.54
MED28-204ENST00000506409 CORTO00230 105 aa11.7□□□□□ -0.54
MED28-204ENST00000506409 GNG7O60262 68 aa11.7□□□□□ -0.54
MED28-204ENST00000506409 CD7P09564 240 aa11.7□□□□□ -0.54
MED28-204ENST00000506409 RNASE2P10153 161 aaKnown RBP11.7□□□□□ -0.54
MED28-204ENST00000506409 SUPT4H1P63272 117 aaKnown RBP11.7□□□□□ -0.54
MED28-204ENST00000506409 NDUFA13Q9P0J0 144 aa11.7□□□□□ -0.54
MED28-204ENST00000506409 A0A0B4J2A0 478 aa11.69□□□□□ -0.54
MED28-204ENST00000506409 SCAF4O95104 1147 aaKnown RBP11.69□□□□□ -0.54
MED28-204ENST00000506409 SULT1A3P0DMM9 295 aa11.69□□□□□ -0.54
MED28-204ENST00000506409 SULT1A4P0DMN0 295 aa11.69□□□□□ -0.54
MED28-204ENST00000506409 NPBWR1P48145 328 aa11.69□□□□□ -0.54
MED28-204ENST00000506409 INPP1P49441 399 aa11.69□□□□□ -0.54
MED28-204ENST00000506409 SRPXP78539 464 aa11.69□□□□□ -0.54
MED28-204ENST00000506409 PVRIGQ6DKI7 326 aa11.69□□□□□ -0.54
MED28-204ENST00000506409 RBPMS2Q6ZRY4 209 aaKnown RBP11.69□□□□□ -0.54
MED28-204ENST00000506409 SLC16A13Q7RTY0 426 aa11.69□□□□□ -0.54
MED28-204ENST00000506409 LGI3Q8N145 548 aa11.69□□□□□ -0.54
MED28-204ENST00000506409 DUSP18Q8NEJ0 188 aa11.69□□□□□ -0.54
MED28-204ENST00000506409 SLC25A21Q9BQT8 299 aaPredicted RBP11.69□□□□□ -0.54
MED28-204ENST00000506409 ZMAT4Q9H898 229 aa11.69□□□□□ -0.54
MED28-204ENST00000506409 CACFD1Q9UGQ2 172 aa11.69□□□□□ -0.54
MED28-204ENST00000506409 SHPKQ9UHJ6 478 aa11.69□□□□□ -0.54
MED28-204ENST00000506409 TRAV25A0A0B4J276 109 aa11.68□□□□□ -0.54
MED28-204ENST00000506409 C15orf62A8K5M9 175 aa11.68□□□□□ -0.54
MED28-204ENST00000506409 CEBPZOSA8MTT3 80 aa11.68□□□□□ -0.54
MED28-204ENST00000506409 K7EMT4 169 aa11.68□□□□□ -0.54
MED28-204ENST00000506409 ZNF207O43670 478 aaKnown RBP11.68□□□□□ -0.54
MED28-204ENST00000506409 YIF1AO95070 293 aa11.68□□□□□ -0.54
MED28-204ENST00000506409 NXPH3O95157 252 aa11.68□□□□□ -0.54
MED28-204ENST00000506409 OPRK1P41145 380 aa11.68□□□□□ -0.54
MED28-204ENST00000506409 BSXQ3C1V8 233 aa11.68□□□□□ -0.54
MED28-204ENST00000506409 TMEM128Q5BJH2 165 aa11.68□□□□□ -0.54
MED28-204ENST00000506409 TRIQKQ629K1 86 aa11.68□□□□□ -0.54
MED28-204ENST00000506409 LYZL2Q7Z4W2 148 aa11.68□□□□□ -0.54
MED28-204ENST00000506409 RCHY1Q96PM5 261 aa11.68□□□□□ -0.54
MED28-204ENST00000506409 HEYLQ9NQ87 328 aaPredicted RBP11.68□□□□□ -0.54
MED28-204ENST00000506409 PIGBOS1A0A0B4J2F0 54 aa11.67□□□□□ -0.54
MED28-204ENST00000506409 OR11H12B2RN74 326 aa11.67□□□□□ -0.54
MED28-204ENST00000506409 VAMP1P23763 118 aa11.67□□□□□ -0.54
MED28-204ENST00000506409 HTR2BP41595 481 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms