RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, human

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-233	ENST00000504203	TRBV23-1	A0A0A0MS06	115 aa		10.53	□□□□□ -0.72
MATR3-233	ENST00000504203	MRGPRG-AS1	Q2M3A8	158 aa		10.53	□□□□□ -0.72
MATR3-233	ENST00000504203	HLA-DRB5	Q30154	266 aa		10.53	□□□□□ -0.72
MATR3-233	ENST00000504203	KCNIP4	Q6PIL6	250 aa		10.53	□□□□□ -0.72
MATR3-233	ENST00000504203	TMEM133	Q9H2Q1	129 aa		10.53	□□□□□ -0.72
MATR3-233	ENST00000504203	MIOX	Q9UGB7	285 aa		10.53	□□□□□ -0.72
MATR3-233	ENST00000504203	NAV3	Q8IVL0	2385 aa		10.53	□□□□□ -0.72
MATR3-233	ENST00000504203	PSMB11	A5LHX3	300 aa		10.53	□□□□□ -0.72
MATR3-233	ENST00000504203	MC5R	P33032	325 aa		10.53	□□□□□ -0.72
MATR3-233	ENST00000504203	FOXL1	Q12952	345 aa		10.53	□□□□□ -0.72
MATR3-233	ENST00000504203	PDZD11	Q5EBL8	140 aa		10.53	□□□□□ -0.72
MATR3-233	ENST00000504203	COA6	Q5JTJ3	125 aa	Known RBP	10.53	□□□□□ -0.72
MATR3-233	ENST00000504203	ACTL10	Q5JWF8	245 aa		10.53	□□□□□ -0.72
MATR3-233	ENST00000504203	C10orf55	Q5SWW7	151 aa		10.53	□□□□□ -0.72
MATR3-233	ENST00000504203	OR10D4P	Q8NGN7	298 aa		10.53	□□□□□ -0.72
MATR3-233	ENST00000504203	LINC01560	Q8TB33	94 aa		10.53	□□□□□ -0.72
MATR3-233	ENST00000504203	RITA1	Q96K30	269 aa		10.53	□□□□□ -0.72
MATR3-233	ENST00000504203	TMEM167B	Q9NRX6	74 aa		10.53	□□□□□ -0.72
MATR3-233	ENST00000504203	TECR	Q9NZ01	308 aa	Known RBP	10.53	□□□□□ -0.72
MATR3-233	ENST00000504203		C9JCJ5	164 aa		10.52	□□□□□ -0.73
MATR3-233	ENST00000504203	SIAH2	O43255	324 aa		10.52	□□□□□ -0.73
MATR3-233	ENST00000504203	IL3RA	P26951	378 aa		10.52	□□□□□ -0.73
MATR3-233	ENST00000504203	CA7	P43166	264 aa		10.52	□□□□□ -0.73
MATR3-233	ENST00000504203	PSG5	Q15238	335 aa		10.52	□□□□□ -0.73
MATR3-233	ENST00000504203	ZNF841	Q6ZN19	808 aa		10.52	□□□□□ -0.73
MATR3-233	ENST00000504203	PQLC2	Q6ZP29	291 aa		10.52	□□□□□ -0.73
MATR3-233	ENST00000504203	OR2T6	Q8NHC8	308 aa		10.52	□□□□□ -0.73
MATR3-233	ENST00000504203	RNASEH2C	Q8TDP1	164 aa	Known RBP	10.52	□□□□□ -0.73
MATR3-233	ENST00000504203	TMEM37	Q8WXS4	190 aa		10.52	□□□□□ -0.73
MATR3-233	ENST00000504203	UHRF2	Q96PU4	802 aa		10.52	□□□□□ -0.73
MATR3-233	ENST00000504203	FNDC4	Q9H6D8	234 aa	Predicted RBP	10.52	□□□□□ -0.73
MATR3-233	ENST00000504203	SPTA1	P02549	2419 aa		10.52	□□□□□ -0.73
MATR3-233	ENST00000504203	FSTL3	O95633	263 aa		10.52	□□□□□ -0.73
MATR3-233	ENST00000504203	PPOX	P50336	477 aa		10.52	□□□□□ -0.73
MATR3-233	ENST00000504203	TEX38	Q6PEX7	206 aa		10.52	□□□□□ -0.73
MATR3-233	ENST00000504203	TMEM183A	Q8IXX5	376 aa		10.52	□□□□□ -0.73
MATR3-233	ENST00000504203	TNFRSF14	Q92956	283 aa		10.52	□□□□□ -0.73
MATR3-233	ENST00000504203	SLC25A33	Q9BSK2	321 aa		10.52	□□□□□ -0.73
MATR3-233	ENST00000504203	TPSG1	Q9NRR2	321 aa		10.52	□□□□□ -0.73
MATR3-233	ENST00000504203	RALY	Q9UKM9	306 aa	Known RBP	10.52	□□□□□ -0.73
MATR3-233	ENST00000504203	LY96	Q9Y6Y9	160 aa		10.52	□□□□□ -0.73
MATR3-233	ENST00000504203	ANKHD1	Q8IWZ3	2542 aa	Known RBP	10.52	□□□□□ -0.73
MATR3-233	ENST00000504203	MALRD1	Q5VYJ5	2156 aa		10.51	□□□□□ -0.73
MATR3-233	ENST00000504203	MDFIC2	A0A1B0GVS7	189 aa		10.51	□□□□□ -0.73
MATR3-233	ENST00000504203	LINC00587	B1AMM8	73 aa		10.51	□□□□□ -0.73
MATR3-233	ENST00000504203	LYNX1	G3V0Z9	82 aa		10.51	□□□□□ -0.73
MATR3-233	ENST00000504203		K7EN84	100 aa		10.51	□□□□□ -0.73
MATR3-233	ENST00000504203	SLC25A17	O43808	307 aa		10.51	□□□□□ -0.73
MATR3-233	ENST00000504203	IGLV1-47	P01700	117 aa		10.51	□□□□□ -0.73
MATR3-233	ENST00000504203	LYNX1	P0DP58	116 aa		10.51	□□□□□ -0.73
MATR3-233	ENST00000504203	GRN	P28799	593 aa	Known RBP	10.51	□□□□□ -0.73
MATR3-233	ENST00000504203	LGALS7	P47929	136 aa		10.51	□□□□□ -0.73
MATR3-233	ENST00000504203	VMA21	Q3ZAQ7	101 aa		10.51	□□□□□ -0.73
MATR3-233	ENST00000504203	MUC15	Q8N387	334 aa		10.51	□□□□□ -0.73
MATR3-233	ENST00000504203	PLXNB1	O43157	2135 aa		10.5	□□□□□ -0.73
MATR3-233	ENST00000504203	IGHV2-70	P01814	119 aa		10.5	□□□□□ -0.73
MATR3-233	ENST00000504203	FABP4	P15090	132 aa		10.5	□□□□□ -0.73
MATR3-233	ENST00000504203	CASP6	P55212	293 aa		10.5	□□□□□ -0.73
MATR3-233	ENST00000504203	TAS2R45	P59539	299 aa		10.5	□□□□□ -0.73
MATR3-233	ENST00000504203	RPL15	P61313	204 aa	Known RBP	10.5	□□□□□ -0.73
MATR3-233	ENST00000504203	SGMS2	Q8NHU3	365 aa		10.5	□□□□□ -0.73
MATR3-233	ENST00000504203	BTF3L4	Q96K17	158 aa		10.5	□□□□□ -0.73
MATR3-233	ENST00000504203	HIST1H2BL	Q99880	126 aa		10.5	□□□□□ -0.73
MATR3-233	ENST00000504203	IGHV2-26	A0A0B4J1V2	119 aa		10.5	□□□□□ -0.73
MATR3-233	ENST00000504203		A0A1W2PPI3	338 aa		10.5	□□□□□ -0.73
MATR3-233	ENST00000504203	FAM90A27P	A6NNH2	459 aa		10.5	□□□□□ -0.73
MATR3-233	ENST00000504203	C8orf88	P0DMB2	117 aa		10.5	□□□□□ -0.73
MATR3-233	ENST00000504203	PDLIM4	P50479	330 aa		10.5	□□□□□ -0.73
MATR3-233	ENST00000504203	SSBP2	P81877	361 aa	Predicted RBP	10.5	□□□□□ -0.73
MATR3-233	ENST00000504203	OR10G8	Q8NGN5	311 aa		10.5	□□□□□ -0.73
MATR3-233	ENST00000504203	OR1P1	Q8NH06	330 aa		10.5	□□□□□ -0.73
MATR3-233	ENST00000504203	ACY3	Q96HD9	319 aa		10.5	□□□□□ -0.73
MATR3-233	ENST00000504203	FAM167A-AS1	Q96KT0	104 aa		10.5	□□□□□ -0.73
MATR3-233	ENST00000504203	MRPL32	Q9BYC8	188 aa	Known RBP	10.5	□□□□□ -0.73
MATR3-233	ENST00000504203	IGKV1D-37	A0A075B6S9	117 aa		10.49	□□□□□ -0.73
MATR3-233	ENST00000504203	OR7C2	O60412	319 aa		10.49	□□□□□ -0.73
MATR3-233	ENST00000504203	SUB1	P53999	127 aa	Known RBP eCLIP	10.49	□□□□□ -0.73	1e-15	■■□□□ 12.2
MATR3-233	ENST00000504203	PVRIG	Q6DKI7	326 aa		10.49	□□□□□ -0.73
MATR3-233	ENST00000504203	CDPF1	Q6NVV7	123 aa		10.49	□□□□□ -0.73
MATR3-233	ENST00000504203	TEX45	Q8NA69	505 aa		10.49	□□□□□ -0.73
MATR3-233	ENST00000504203	EAF1	Q96JC9	268 aa	Predicted RBP	10.49	□□□□□ -0.73
MATR3-233	ENST00000504203	IGF2R	P11717	2491 aa		10.49	□□□□□ -0.73
MATR3-233	ENST00000504203	IGHV3-72	A0A0B4J1Y9	119 aa		10.49	□□□□□ -0.73
MATR3-233	ENST00000504203		A0A0U1RQK1	487 aa		10.49	□□□□□ -0.73
MATR3-233	ENST00000504203	ZNF320	A2RRD8	509 aa		10.49	□□□□□ -0.73
MATR3-233	ENST00000504203	GGTLC3	B5MD39	225 aa		10.49	□□□□□ -0.73
MATR3-233	ENST00000504203	CRYGB	P07316	175 aa		10.49	□□□□□ -0.73
MATR3-233	ENST00000504203	HNF1A	P20823	631 aa		10.49	□□□□□ -0.73
MATR3-233	ENST00000504203	DLX1	P56177	255 aa		10.49	□□□□□ -0.73
MATR3-233	ENST00000504203	ZNF672	Q499Z4	452 aa	Predicted RBP	10.49	□□□□□ -0.73
MATR3-233	ENST00000504203	MORN5	Q5VZ52	161 aa		10.49	□□□□□ -0.73
MATR3-233	ENST00000504203	THAP8	Q8NA92	274 aa		10.49	□□□□□ -0.73
MATR3-233	ENST00000504203	RNF2	Q99496	336 aa		10.49	□□□□□ -0.73
MATR3-233	ENST00000504203	COL25A1	Q9BXS0	654 aa	Predicted RBP	10.49	□□□□□ -0.73
MATR3-233	ENST00000504203	DNAJC4	Q9NNZ3	241 aa		10.49	□□□□□ -0.73
MATR3-233	ENST00000504203	MRPL36	Q9P0J6	103 aa	Known RBP	10.49	□□□□□ -0.73
MATR3-233	ENST00000504203		A0A1W2PRE2	83 aa		10.48	□□□□□ -0.73
MATR3-233	ENST00000504203	IGLC7	A0M8Q6	106 aa		10.48	□□□□□ -0.73
MATR3-233	ENST00000504203	XKRY2	A2RUG3	117 aa		10.48	□□□□□ -0.73
MATR3-233	ENST00000504203	CRYBB3	P26998	211 aa		10.48	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms