RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 OR10C1Q96KK4 312 aa10.92□□□□□ -0.66
RNF4-202ENST00000502316 CCDC140Q96MF4 163 aa10.92□□□□□ -0.66
RNF4-202ENST00000502316 ATP6V0BQ99437 205 aa10.92□□□□□ -0.66
RNF4-202ENST00000502316 HIPK2Q9H2X6 1198 aa10.92□□□□□ -0.66
RNF4-202ENST00000502316 HEYLQ9NQ87 328 aaPredicted RBP10.92□□□□□ -0.66
RNF4-202ENST00000502316 PEF1Q9UBV8 284 aaKnown RBP10.92□□□□□ -0.66
RNF4-202ENST00000502316 NOTCH1P46531 2555 aa10.92□□□□□ -0.66
RNF4-202ENST00000502316 NOTCH3Q9UM47 2321 aa10.91□□□□□ -0.66
RNF4-202ENST00000502316 TRBV7-1A0A0A6YYK4 115 aa10.91□□□□□ -0.66
RNF4-202ENST00000502316 I3L2K1 104 aa10.91□□□□□ -0.66
RNF4-202ENST00000502316 TRBV12-3P01733 135 aa10.91□□□□□ -0.66
RNF4-202ENST00000502316 SUB1P53999 127 aaKnown RBP eCLIP10.91□□□□□ -0.66
RNF4-202ENST00000502316 ID3Q02535 119 aa10.91□□□□□ -0.66
RNF4-202ENST00000502316 IAH1Q2TAA2 248 aaPredicted RBP10.91□□□□□ -0.66
RNF4-202ENST00000502316 C2orf83Q53S99 150 aa10.91□□□□□ -0.66
RNF4-202ENST00000502316 ZBTB8BQ8NAP8 495 aaPredicted RBP10.91□□□□□ -0.66
RNF4-202ENST00000502316 SLC24A4Q8NFF2 622 aa10.91□□□□□ -0.66
RNF4-202ENST00000502316 ZNF502Q8TBZ5 544 aa10.91□□□□□ -0.66
RNF4-202ENST00000502316 DPF1Q92782 380 aa10.91□□□□□ -0.66
RNF4-202ENST00000502316 FBN3Q75N90 2809 aa10.91□□□□□ -0.66
RNF4-202ENST00000502316 C7orf66A4D0T2 115 aa10.9□□□□□ -0.66
RNF4-202ENST00000502316 ANKRD34BA5PLL1 514 aa10.9□□□□□ -0.66
RNF4-202ENST00000502316 CORTO00230 105 aa10.9□□□□□ -0.66
RNF4-202ENST00000502316 CCSO14618 274 aa10.9□□□□□ -0.66
RNF4-202ENST00000502316 SYNGR2O43760 224 aa10.9□□□□□ -0.66
RNF4-202ENST00000502316 MED6O75586 246 aa10.9□□□□□ -0.66
RNF4-202ENST00000502316 ATP5IP56385 69 aaPredicted RBP10.9□□□□□ -0.66
RNF4-202ENST00000502316 RGS21Q2M5E4 152 aa10.9□□□□□ -0.66
RNF4-202ENST00000502316 C11orf87Q6NUJ2 197 aa10.9□□□□□ -0.66
RNF4-202ENST00000502316 UXS1Q8NBZ7 420 aa10.9□□□□□ -0.66
RNF4-202ENST00000502316 SCARB1Q8WTV0 552 aa10.9□□□□□ -0.66
RNF4-202ENST00000502316 TMEM170AQ8WVE7 144 aa10.9□□□□□ -0.66
RNF4-202ENST00000502316 U3KQ87 197 aa10.9□□□□□ -0.66
RNF4-202ENST00000502316 F8W735 103 aaPredicted RBP10.89□□□□□ -0.67
RNF4-202ENST00000502316 BMPR1BO00238 502 aa10.89□□□□□ -0.67
RNF4-202ENST00000502316 LY86O95711 162 aa10.89□□□□□ -0.67
RNF4-202ENST00000502316 CD33P20138 364 aa10.89□□□□□ -0.67
RNF4-202ENST00000502316 ZP3P21754 424 aa10.89□□□□□ -0.67
RNF4-202ENST00000502316 NPY1RP25929 384 aa10.89□□□□□ -0.67
RNF4-202ENST00000502316 HOXD3P31249 432 aaPredicted RBP10.89□□□□□ -0.67
RNF4-202ENST00000502316 FCGR2BP31994 310 aaPredicted RBP10.89□□□□□ -0.67
RNF4-202ENST00000502316 NKX2-1P43699 371 aaPredicted RBP10.89□□□□□ -0.67
RNF4-202ENST00000502316 TATDN3Q17R31 274 aa10.89□□□□□ -0.67
RNF4-202ENST00000502316 MISP3Q96FF7 219 aa10.89□□□□□ -0.67
RNF4-202ENST00000502316 CIB3Q96Q77 187 aaPredicted RBP10.89□□□□□ -0.67
RNF4-202ENST00000502316 C21orf62Q9NYP8 219 aa10.89□□□□□ -0.67
RNF4-202ENST00000502316 S4R3C0 116 aa10.89□□□□□ -0.67
RNF4-202ENST00000502316 MT-CO2P00403 227 aa10.88□□□□□ -0.67
RNF4-202ENST00000502316 IGHV3-23P01764 117 aa10.88□□□□□ -0.67
RNF4-202ENST00000502316 SLURP1P55000 103 aa10.88□□□□□ -0.67
RNF4-202ENST00000502316 CLEC19AQ6UXS0 136 aa10.88□□□□□ -0.67
RNF4-202ENST00000502316 NOXA1Q86UR1 476 aa10.88□□□□□ -0.67
RNF4-202ENST00000502316 RNASEH2CQ8TDP1 164 aaKnown RBP10.88□□□□□ -0.67
RNF4-202ENST00000502316 DLX4Q92988 240 aaPredicted RBP10.88□□□□□ -0.67
RNF4-202ENST00000502316 RCC1LQ96I51 464 aaKnown RBP10.88□□□□□ -0.67
RNF4-202ENST00000502316 MAGT1Q9H0U3 335 aa10.88□□□□□ -0.67
RNF4-202ENST00000502316 MEGF8Q7Z7M0 2845 aa10.87□□□□□ -0.67
RNF4-202ENST00000502316 IGHV3-21A0A0B4J1V1 117 aa10.87□□□□□ -0.67
RNF4-202ENST00000502316 PPP5D1E7EU14 171 aa10.87□□□□□ -0.67
RNF4-202ENST00000502316 GGCTO75223 188 aaKnown RBP10.87□□□□□ -0.67
RNF4-202ENST00000502316 IFNA10P01566 189 aa10.87□□□□□ -0.67
RNF4-202ENST00000502316 CLEC3BP05452 202 aa10.87□□□□□ -0.67
RNF4-202ENST00000502316 IAPPP10997 89 aa10.87□□□□□ -0.67
RNF4-202ENST00000502316 GPR183P32249 361 aa10.87□□□□□ -0.67
RNF4-202ENST00000502316 POLR2GP62487 172 aaKnown RBP eCLIP10.87□□□□□ -0.67
RNF4-202ENST00000502316 IL15RAQ13261 267 aa10.87□□□□□ -0.67
RNF4-202ENST00000502316 KLF5Q13887 457 aaPredicted RBP10.87□□□□□ -0.67
RNF4-202ENST00000502316 OXA1LQ15070 435 aa10.87□□□□□ -0.67
RNF4-202ENST00000502316 DCUN1D4Q92564 292 aa10.87□□□□□ -0.67
RNF4-202ENST00000502316 PINX1Q96BK5 328 aaKnown RBP10.87□□□□□ -0.67
RNF4-202ENST00000502316 BSCL2Q96G97 398 aaPredicted RBP10.87□□□□□ -0.67
RNF4-202ENST00000502316 C2orf50Q96LR7 162 aa10.87□□□□□ -0.67
RNF4-202ENST00000502316 TXN2Q99757 166 aa10.87□□□□□ -0.67
RNF4-202ENST00000502316 FNDC4Q9H6D8 234 aaPredicted RBP10.87□□□□□ -0.67
RNF4-202ENST00000502316 DNAH3Q8TD57 4116 aa10.87□□□□□ -0.67
RNF4-202ENST00000502316 C5orf51A6NDU8 294 aa10.86□□□□□ -0.67
RNF4-202ENST00000502316 C15orf62A8K5M9 175 aa10.86□□□□□ -0.67
RNF4-202ENST00000502316 FAM25EA8MYX2 175 aa10.86□□□□□ -0.67
RNF4-202ENST00000502316 WRBO00258 174 aa10.86□□□□□ -0.67
RNF4-202ENST00000502316 TGOLN2O43493 480 aa10.86□□□□□ -0.67
RNF4-202ENST00000502316 MBPP02686 304 aaPredicted RBP10.86□□□□□ -0.67
RNF4-202ENST00000502316 ARL3P36405 182 aa10.86□□□□□ -0.67
RNF4-202ENST00000502316 RPEL1Q2QD12 228 aa10.86□□□□□ -0.67
RNF4-202ENST00000502316 SPSB3Q6PJ21 355 aa10.86□□□□□ -0.67
RNF4-202ENST00000502316 GSG1LQ6UXU4 331 aa10.86□□□□□ -0.67
RNF4-202ENST00000502316 MCRIP2Q9BUT9 160 aaKnown RBP10.86□□□□□ -0.67
RNF4-202ENST00000502316 GAR1Q9NY12 217 aaKnown RBP10.86□□□□□ -0.67
RNF4-202ENST00000502316 GSKIPQ9P0R6 139 aa10.86□□□□□ -0.67
RNF4-202ENST00000502316 RCL1Q9Y2P8 373 aaKnown RBP10.86□□□□□ -0.67
RNF4-202ENST00000502316 ALG5Q9Y673 324 aa10.86□□□□□ -0.67
RNF4-202ENST00000502316 OR2T8A6NH00 312 aa10.85□□□□□ -0.67
RNF4-202ENST00000502316 OVOL1O14753 267 aa10.85□□□□□ -0.67
RNF4-202ENST00000502316 WIPF1O43516 503 aa10.85□□□□□ -0.67
RNF4-202ENST00000502316 SSSCA1O60232 199 aa10.85□□□□□ -0.67
RNF4-202ENST00000502316 TMEM50AO95807 157 aa10.85□□□□□ -0.67
RNF4-202ENST00000502316 OPRK1P41145 380 aa10.85□□□□□ -0.67
RNF4-202ENST00000502316 MFAP4P55083 255 aa10.85□□□□□ -0.67
RNF4-202ENST00000502316 SAMD5Q5TGI4 173 aa10.85□□□□□ -0.67
RNF4-202ENST00000502316 GPHB5Q86YW7 130 aa10.85□□□□□ -0.67
RNF4-202ENST00000502316 C1QL4Q86Z23 238 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms