RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 ZNF672Q499Z4 452 aaPredicted RBP6.65□□□□□ -1.34
HLA-DMB-262ENST00000498020 PNKDQ8N490 385 aa6.65□□□□□ -1.34
HLA-DMB-262ENST00000498020 MARCH11A6NNE9 402 aa6.65□□□□□ -1.34
HLA-DMB-262ENST00000498020 MPDU1O75352 247 aa6.65□□□□□ -1.34
HLA-DMB-262ENST00000498020 IGLV1-44P01699 117 aa6.65□□□□□ -1.34
HLA-DMB-262ENST00000498020 SNRPEP62304 92 aaKnown RBP6.65□□□□□ -1.34
HLA-DMB-262ENST00000498020 SCGB1D4Q6XE38 83 aa6.65□□□□□ -1.34
HLA-DMB-262ENST00000498020 LRP11Q86VZ4 500 aa6.65□□□□□ -1.34
HLA-DMB-262ENST00000498020 FAM216AQ8WUB2 273 aa6.65□□□□□ -1.34
HLA-DMB-262ENST00000498020 OR51B2Q9Y5P1 312 aa6.65□□□□□ -1.34
HLA-DMB-262ENST00000498020 C17orf98A8MV24 154 aa6.65□□□□□ -1.35
HLA-DMB-262ENST00000498020 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.65□□□□□ -1.35
HLA-DMB-262ENST00000498020 NDUFS7O75251 213 aa6.65□□□□□ -1.35
HLA-DMB-262ENST00000498020 CEACAM4O75871 244 aa6.65□□□□□ -1.35
HLA-DMB-262ENST00000498020 TNFSF13O75888 250 aa6.65□□□□□ -1.35
HLA-DMB-262ENST00000498020 FAM106CPP0CH98 169 aa6.65□□□□□ -1.35
HLA-DMB-262ENST00000498020 LOXL3P58215 753 aa6.65□□□□□ -1.35
HLA-DMB-262ENST00000498020 Q6ZN92 141 aa6.65□□□□□ -1.35
HLA-DMB-262ENST00000498020 ZNRF1Q8ND25 227 aa6.65□□□□□ -1.35
HLA-DMB-262ENST00000498020 LOC105371267A0A1B0GV96 52 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 C17orf100A8MU93 164 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 J3KRW8 73 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 M0R2Z0 102 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 ISLRO14498 428 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 CD1BP29016 333 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 SMAGPQ0VAQ4 97 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 HLA-DRB5Q30154 266 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 DEFB113Q30KQ7 82 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 STPG3Q8N7X2 389 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 OR4A5Q8NH83 315 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 P2RX4Q99571 388 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 NPFFR1Q9GZQ6 430 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 HIGD1AQ9Y241 93 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 CFAP46Q8IYW2 2715 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 YPEL1O60688 119 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 SLC25A16P16260 332 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 RPL29P47914 159 aaKnown RBP6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 MRPL54Q6P161 138 aaKnown RBP6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 OR4C5Q8NGB2 326 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 YPEL2Q96QA6 119 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 VCANP13611 3396 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 H3BQ15 152 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 TCF21O43680 179 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 COMPP49747 757 aaPredicted RBP6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 SPANXN1Q5VSR9 72 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 ZNF474Q6S9Z5 364 aaPredicted RBP6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 COQ2Q96H96 371 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 TXNDC17Q9BRA2 123 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 RPRMQ9NS64 109 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 TRAV34A0A0B4J273 112 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 A0A1W2PS18 150 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 ZNF729A6NN14 1252 aaPredicted RBP6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 AP4M1O00189 453 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 IGKV1-5P01602 117 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 BCL2P10415 239 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 DLX1P56177 255 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 RBM14Q96PK6 669 aaKnown RBP6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 TMEM204Q9BSN7 226 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 PAXXQ9BUH6 204 aa6.64□□□□□ -1.35
HLA-DMB-262ENST00000498020 AREGP15514 252 aa6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 RPL8P62917 257 aaKnown RBP6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 MRPL37Q9BZE1 423 aaKnown RBP6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 DCAF16Q9NXF7 216 aa6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 BET1LQ9NYM9 111 aa6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 IDI2-AS1Q9NZ38 188 aa6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 ELOA3CA0A087WX78 387 aaPredicted RBP6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 A0A0G2JRQ6 117 aa6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 A8MWL6 223 aa6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 C3orf36Q3SXR2 165 aa6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 ZNF506Q5JVG8 444 aa6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 Q6ZR03 302 aa6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 BBC3Q96PG8 261 aaPredicted RBP6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 BEX4Q9NWD9 120 aaPredicted RBP6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 MGPP08493 103 aa6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 DLK1P80370 383 aa6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 ZNF585BQ52M93 769 aa6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 TMEM78Q5T7P6 136 aa6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 EBLN2Q6P2I7 272 aa6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 C16orf82Q7Z2V1 217 aa6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 CYB561D1Q8N8Q1 229 aa6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 OR2D3Q8NGH3 330 aa6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 ISOC2Q96AB3 205 aa6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 RARRES2Q99969 163 aa6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 MAP1LC3CQ9BXW4 147 aa6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 DKK4Q9UBT3 224 aa6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 HSPB7Q9UBY9 170 aa6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 KIAA2026Q5HYC2 2103 aa6.63□□□□□ -1.35
HLA-DMB-262ENST00000498020 IGHV3OR16-12A0A075B7B8 117 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 SNURFLB1AK76 121 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 RBFOX2O43251 390 aaKnown RBP eCLIP6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 WNT2P09544 360 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 OR10J1P30954 320 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 MORN2Q502X0 79 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 PQLC2Q6ZP29 291 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 CD177Q8N6Q3 437 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 MRAPQ8TCY5 172 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 ITLN2Q8WWU7 325 aaPredicted RBP6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 RAB24Q969Q5 203 aa6.62□□□□□ -1.35
HLA-DMB-262ENST00000498020 TFF1P04155 84 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms