RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 C1QBP02746 253 aa13.18□□□□□ -0.3
SNX17-209ENST00000494893 PRB2P02812 416 aaPredicted RBP13.18□□□□□ -0.3
SNX17-209ENST00000494893 RAB32Q13637 225 aa13.18□□□□□ -0.3
SNX17-209ENST00000494893 ZNF429Q86V71 674 aa13.18□□□□□ -0.3
SNX17-209ENST00000494893 DCUN1D4Q92564 292 aa13.18□□□□□ -0.3
SNX17-209ENST00000494893 COMMD5Q9GZQ3 224 aa13.18□□□□□ -0.3
SNX17-209ENST00000494893 NDUFA4L2Q9NRX3 87 aa13.18□□□□□ -0.3
SNX17-209ENST00000494893 TMEM14BQ9NUH8 114 aa13.18□□□□□ -0.3
SNX17-209ENST00000494893 CACFD1Q9UGQ2 172 aa13.18□□□□□ -0.3
SNX17-209ENST00000494893 PRNDQ9UKY0 176 aa13.18□□□□□ -0.3
SNX17-209ENST00000494893 DMRT1Q9Y5R6 373 aa13.18□□□□□ -0.3
SNX17-209ENST00000494893 PRKDCP78527 4128 aaKnown RBP13.18□□□□□ -0.3
SNX17-209ENST00000494893 C15orf61A6NNL5 157 aa13.17□□□□□ -0.3
SNX17-209ENST00000494893 LINC01619G3V211 115 aa13.17□□□□□ -0.3
SNX17-209ENST00000494893 OR2J3O76001 311 aa13.17□□□□□ -0.3
SNX17-209ENST00000494893 HSPB1P04792 205 aaKnown RBP13.17□□□□□ -0.3
SNX17-209ENST00000494893 OR8U8P0C7N1 319 aa13.17□□□□□ -0.3
SNX17-209ENST00000494893 KRTAP10-11P60412 298 aa13.17□□□□□ -0.3
SNX17-209ENST00000494893 WT1-ASQ06250 92 aa13.17□□□□□ -0.3
SNX17-209ENST00000494893 LRRC37A5PQ49AS3 106 aa13.17□□□□□ -0.3
SNX17-209ENST00000494893 ZNF343Q6P1L6 599 aa13.17□□□□□ -0.3
SNX17-209ENST00000494893 DLX4Q92988 240 aaPredicted RBP13.17□□□□□ -0.3
SNX17-209ENST00000494893 RNF126Q9BV68 326 aa13.17□□□□□ -0.3
SNX17-209ENST00000494893 QTRT1Q9BXR0 403 aaKnown RBP13.17□□□□□ -0.3
SNX17-209ENST00000494893 FKBP11Q9NYL4 201 aa13.17□□□□□ -0.3
SNX17-209ENST00000494893 HSPB7Q9UBY9 170 aa13.17□□□□□ -0.3
SNX17-209ENST00000494893 OR51B2Q9Y5P1 312 aa13.17□□□□□ -0.3
SNX17-209ENST00000494893 A0A0G2JLM5 398 aa13.16□□□□□ -0.3
SNX17-209ENST00000494893 ANKRD34BA5PLL1 514 aa13.16□□□□□ -0.3
SNX17-209ENST00000494893 K7EPK0 472 aa13.16□□□□□ -0.3
SNX17-209ENST00000494893 WIPF1O43516 503 aa13.16□□□□□ -0.3
SNX17-209ENST00000494893 HOXD3P31249 432 aaPredicted RBP13.16□□□□□ -0.3
SNX17-209ENST00000494893 S100A10P60903 97 aa13.16□□□□□ -0.3
SNX17-209ENST00000494893 TNFRSF9Q07011 255 aa13.16□□□□□ -0.3
SNX17-209ENST00000494893 ZFP69Q49AA0 526 aa13.16□□□□□ -0.3
SNX17-209ENST00000494893 C11orf87Q6NUJ2 197 aa13.16□□□□□ -0.3
SNX17-209ENST00000494893 OR1L8Q8NGR8 309 aa13.16□□□□□ -0.3
SNX17-209ENST00000494893 OR52E5Q8NH55 327 aa13.16□□□□□ -0.3
SNX17-209ENST00000494893 DPF1Q92782 380 aa13.16□□□□□ -0.3
SNX17-209ENST00000494893 USMG5Q96IX5 58 aa13.16□□□□□ -0.3
SNX17-209ENST00000494893 LSM5Q9Y4Y9 91 aaKnown RBP13.16□□□□□ -0.3
SNX17-209ENST00000494893 IGLV11-55A0A075B6I3 123 aa13.15□□□□□ -0.3
SNX17-209ENST00000494893 FAM223BA6NKX1 122 aa13.15□□□□□ -0.3
SNX17-209ENST00000494893 H0YIZ8 118 aa13.15□□□□□ -0.3
SNX17-209ENST00000494893 NXPH3O95157 252 aa13.15□□□□□ -0.3
SNX17-209ENST00000494893 NDUFB8O95169 186 aa13.15□□□□□ -0.3
SNX17-209ENST00000494893 RLN2P04090 185 aa13.15□□□□□ -0.3
SNX17-209ENST00000494893 PET100P0DJ07 73 aa13.15□□□□□ -0.3
SNX17-209ENST00000494893 SLC25A4P12235 298 aa13.15□□□□□ -0.3
SNX17-209ENST00000494893 HSPE1P61604 102 aaKnown RBP13.15□□□□□ -0.3
SNX17-209ENST00000494893 POLR2GP62487 172 aaKnown RBP eCLIP13.15□□□□□ -0.3
SNX17-209ENST00000494893 EGFEM1PQ0D2K5 195 aa13.15□□□□□ -0.3
SNX17-209ENST00000494893 EXOSC2Q13868 293 aaKnown RBP13.15□□□□□ -0.3
SNX17-209ENST00000494893 PDLIM3Q53GG5 364 aaPredicted RBP13.15□□□□□ -0.3
SNX17-209ENST00000494893 PRSS54Q6PEW0 395 aa13.15□□□□□ -0.3
SNX17-209ENST00000494893 FAM223AQ8IWN6 122 aa13.15□□□□□ -0.3
SNX17-209ENST00000494893 NECAP1Q8NC96 275 aa13.15□□□□□ -0.3
SNX17-209ENST00000494893 THAP6Q8TBB0 222 aa13.15□□□□□ -0.3
SNX17-209ENST00000494893 SRSF8Q9BRL6 282 aaKnown RBP13.15□□□□□ -0.3
SNX17-209ENST00000494893 MAGT1Q9H0U3 335 aa13.15□□□□□ -0.3
SNX17-209ENST00000494893 RCL1Q9Y2P8 373 aaKnown RBP13.15□□□□□ -0.3
SNX17-209ENST00000494893 WRBO00258 174 aa13.14□□□□□ -0.31
SNX17-209ENST00000494893 SYNGR2O43760 224 aa13.14□□□□□ -0.31
SNX17-209ENST00000494893 MED6O75586 246 aa13.14□□□□□ -0.31
SNX17-209ENST00000494893 DEDDO75618 318 aa13.14□□□□□ -0.31
SNX17-209ENST00000494893 IFNA17P01571 189 aa13.14□□□□□ -0.31
SNX17-209ENST00000494893 HNRNPCP07910 306 aaKnown RBP eCLIP13.14□□□□□ -0.31
SNX17-209ENST00000494893 LYL1P12980 280 aa13.14□□□□□ -0.31
SNX17-209ENST00000494893 MFAP2P55001 183 aa13.14□□□□□ -0.31
SNX17-209ENST00000494893 SPCS3P61009 180 aa13.14□□□□□ -0.31
SNX17-209ENST00000494893 NOXA1Q86UR1 476 aa13.14□□□□□ -0.31
SNX17-209ENST00000494893 OR11H4Q8NGC9 324 aa13.14□□□□□ -0.31
SNX17-209ENST00000494893 OR5B3Q8NH48 314 aa13.14□□□□□ -0.31
SNX17-209ENST00000494893 HYLS1Q96M11 299 aa13.14□□□□□ -0.31
SNX17-209ENST00000494893 MCRIP2Q9BUT9 160 aaKnown RBP13.14□□□□□ -0.31
SNX17-209ENST00000494893 HINT2Q9BX68 163 aa13.14□□□□□ -0.31
SNX17-209ENST00000494893 RBKSQ9H477 322 aa13.14□□□□□ -0.31
SNX17-209ENST00000494893 C11orf1Q9H5F2 150 aa13.14□□□□□ -0.31
SNX17-209ENST00000494893 MBD2Q9UBB5 411 aa13.14□□□□□ -0.31
SNX17-209ENST00000494893 FBXL7Q9UJT9 491 aa13.14□□□□□ -0.31
SNX17-209ENST00000494893 BOLA2-SMG1P6H3BVE0 249 aa13.13□□□□□ -0.31
SNX17-209ENST00000494893 OVOL1O14753 267 aa13.13□□□□□ -0.31
SNX17-209ENST00000494893 OR13C7P0DN81 318 aa13.13□□□□□ -0.31
SNX17-209ENST00000494893 ATP5G2Q06055 141 aa13.13□□□□□ -0.31
SNX17-209ENST00000494893 C15orf32Q32M92 178 aa13.13□□□□□ -0.31
SNX17-209ENST00000494893 RAB40CQ96S21 281 aa13.13□□□□□ -0.31
SNX17-209ENST00000494893 AURKAIP1Q9NWT8 199 aaPredicted RBP13.13□□□□□ -0.31
SNX17-209ENST00000494893 OR5AC2Q9NZP5 309 aa13.13□□□□□ -0.31
SNX17-209ENST00000494893 PEF1Q9UBV8 284 aaKnown RBP13.13□□□□□ -0.31
SNX17-209ENST00000494893 S4R3C0 116 aa13.13□□□□□ -0.31
SNX17-209ENST00000494893 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.12□□□□□ -0.31
SNX17-209ENST00000494893 MFSD2BA6NFX1 497 aa13.12□□□□□ -0.31
SNX17-209ENST00000494893 SEC14L6B5MCN3 397 aa13.12□□□□□ -0.31
SNX17-209ENST00000494893 E5RGE8 158 aa13.12□□□□□ -0.31
SNX17-209ENST00000494893 BMPR1BO00238 502 aa13.12□□□□□ -0.31
SNX17-209ENST00000494893 SSSCA1O60232 199 aa13.12□□□□□ -0.31
SNX17-209ENST00000494893 PVALBP20472 110 aaPredicted RBP13.12□□□□□ -0.31
SNX17-209ENST00000494893 CCDC140Q96MF4 163 aa13.12□□□□□ -0.31
SNX17-209ENST00000494893 FXYD6-FXYD2A0A087WZ82 144 aa13.11□□□□□ -0.31
SNX17-209ENST00000494893 HMSDA8MTL9 139 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms