RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 TRAPPC1Q9Y5R8 145 aa9.08□□□□□ -0.96
CHMP3-209ENST00000494623 CEP295Q9C0D2 2601 aa9.08□□□□□ -0.96
CHMP3-209ENST00000494623 IGHV3-72A0A0B4J1Y9 119 aa9.08□□□□□ -0.96
CHMP3-209ENST00000494623 SLC17A3O00476 420 aa9.08□□□□□ -0.96
CHMP3-209ENST00000494623 DLL1O00548 723 aa9.08□□□□□ -0.96
CHMP3-209ENST00000494623 USF1P22415 310 aaPredicted RBP9.08□□□□□ -0.96
CHMP3-209ENST00000494623 CRYBB3P26998 211 aa9.08□□□□□ -0.96
CHMP3-209ENST00000494623 DLX1P56177 255 aa9.08□□□□□ -0.96
CHMP3-209ENST00000494623 ATP5IP56385 69 aaPredicted RBP9.08□□□□□ -0.96
CHMP3-209ENST00000494623 LCN2P80188 198 aa9.08□□□□□ -0.96
CHMP3-209ENST00000494623 FOXL1Q12952 345 aa9.08□□□□□ -0.96
CHMP3-209ENST00000494623 SLC35E1Q96K37 410 aa9.08□□□□□ -0.96
CHMP3-209ENST00000494623 LYNX1G3V0Z9 82 aa9.07□□□□□ -0.96
CHMP3-209ENST00000494623 K7EN84 100 aa9.07□□□□□ -0.96
CHMP3-209ENST00000494623 PLAUP00749 431 aa9.07□□□□□ -0.96
CHMP3-209ENST00000494623 LYNX1P0DP58 116 aa9.07□□□□□ -0.96
CHMP3-209ENST00000494623 WT1-ASQ06250 92 aa9.07□□□□□ -0.96
CHMP3-209ENST00000494623 RBPJQ06330 500 aa9.07□□□□□ -0.96
CHMP3-209ENST00000494623 HLA-DRB5Q30154 266 aa9.07□□□□□ -0.96
CHMP3-209ENST00000494623 TEX38Q6PEX7 206 aa9.07□□□□□ -0.96
CHMP3-209ENST00000494623 TGIF2LXQ8IUE1 241 aa9.07□□□□□ -0.96
CHMP3-209ENST00000494623 ZNF503Q96F45 646 aa9.07□□□□□ -0.96
CHMP3-209ENST00000494623 TRAV5A0A0B4J249 113 aa9.07□□□□□ -0.96
CHMP3-209ENST00000494623 IGHV1-69-2A0A0G2JMI3 117 aa9.07□□□□□ -0.96
CHMP3-209ENST00000494623 SLC25A17O43808 307 aa9.07□□□□□ -0.96
CHMP3-209ENST00000494623 AMBPP02760 352 aa9.07□□□□□ -0.96
CHMP3-209ENST00000494623 SSBP2P81877 361 aaPredicted RBP9.07□□□□□ -0.96
CHMP3-209ENST00000494623 OR5I1Q13606 314 aa9.07□□□□□ -0.96
CHMP3-209ENST00000494623 C9orf152Q5JTZ5 239 aa9.07□□□□□ -0.96
CHMP3-209ENST00000494623 PDPNQ86YL7 162 aa9.07□□□□□ -0.96
CHMP3-209ENST00000494623 LINC01560Q8TB33 94 aa9.07□□□□□ -0.96
CHMP3-209ENST00000494623 TMEM167AQ8TBQ9 72 aa9.07□□□□□ -0.96
CHMP3-209ENST00000494623 IMMP2LQ96T52 175 aa9.07□□□□□ -0.96
CHMP3-209ENST00000494623 ZNF430Q9H8G1 570 aaPredicted RBP9.07□□□□□ -0.96
CHMP3-209ENST00000494623 TMEM167BQ9NRX6 74 aa9.07□□□□□ -0.96
CHMP3-209ENST00000494623 POLEQ07864 2286 aa9.07□□□□□ -0.96
CHMP3-209ENST00000494623 HELTA6NFD8 242 aa9.06□□□□□ -0.96
CHMP3-209ENST00000494623 CGB1A6NKQ9 187 aa9.06□□□□□ -0.96
CHMP3-209ENST00000494623 K7ENP7 123 aa9.06□□□□□ -0.96
CHMP3-209ENST00000494623 REG1AP05451 166 aa9.06□□□□□ -0.96
CHMP3-209ENST00000494623 APOBEC3AP31941 199 aaPredicted RBP9.06□□□□□ -0.96
CHMP3-209ENST00000494623 ZNF90Q03938 601 aa9.06□□□□□ -0.96
CHMP3-209ENST00000494623 SSX8Q7RTT4 187 aa9.06□□□□□ -0.96
CHMP3-209ENST00000494623 VSTM2AQ8TAG5 236 aa9.06□□□□□ -0.96
CHMP3-209ENST00000494623 ST6GALNAC6Q969X2 333 aa9.06□□□□□ -0.96
CHMP3-209ENST00000494623 SSUH2Q9Y2M2 353 aa9.06□□□□□ -0.96
CHMP3-209ENST00000494623 WASHC3Q9Y3C0 194 aa9.06□□□□□ -0.96
CHMP3-209ENST00000494623 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.06□□□□□ -0.96
CHMP3-209ENST00000494623 A0A1W2PN81 502 aa9.06□□□□□ -0.96
CHMP3-209ENST00000494623 IGLV2-23P01705 113 aa9.06□□□□□ -0.96
CHMP3-209ENST00000494623 CD3EP07766 207 aa9.06□□□□□ -0.96
CHMP3-209ENST00000494623 IGHV1-8P0DP01 117 aa9.06□□□□□ -0.96
CHMP3-209ENST00000494623 AREGP15514 252 aa9.06□□□□□ -0.96
CHMP3-209ENST00000494623 HIST1H1BP16401 226 aaKnown RBP9.06□□□□□ -0.96
CHMP3-209ENST00000494623 DLX6P56179 175 aa9.06□□□□□ -0.96
CHMP3-209ENST00000494623 RPL15P61313 204 aaKnown RBP9.06□□□□□ -0.96
CHMP3-209ENST00000494623 SUMO1P63165 101 aaKnown RBP9.06□□□□□ -0.96
CHMP3-209ENST00000494623 TMEM155Q4W5P6 130 aa9.06□□□□□ -0.96
CHMP3-209ENST00000494623 LINC00311Q8N616 119 aa9.06□□□□□ -0.96
CHMP3-209ENST00000494623 C11orf52Q96A22 123 aa9.06□□□□□ -0.96
CHMP3-209ENST00000494623 EAF1Q96JC9 268 aaPredicted RBP9.06□□□□□ -0.96
CHMP3-209ENST00000494623 TPSG1Q9NRR2 321 aa9.06□□□□□ -0.96
CHMP3-209ENST00000494623 OR5G3P0C626 314 aa9.05□□□□□ -0.96
CHMP3-209ENST00000494623 GPX4P36969 197 aaPredicted RBP9.05□□□□□ -0.96
CHMP3-209ENST00000494623 CNN1P51911 297 aaKnown RBP9.05□□□□□ -0.96
CHMP3-209ENST00000494623 TAS2R45P59539 299 aa9.05□□□□□ -0.96
CHMP3-209ENST00000494623 ERVFC1-1P60608 527 aa9.05□□□□□ -0.96
CHMP3-209ENST00000494623 PQLC2Q6ZP29 291 aa9.05□□□□□ -0.96
CHMP3-209ENST00000494623 CACNG8Q8WXS5 425 aa9.05□□□□□ -0.96
CHMP3-209ENST00000494623 NPIPB3Q92617 1050 aa9.05□□□□□ -0.96
CHMP3-209ENST00000494623 SLC25A33Q9BSK2 321 aa9.05□□□□□ -0.96
CHMP3-209ENST00000494623 PRDM13Q9H4Q3 707 aa9.05□□□□□ -0.96
CHMP3-209ENST00000494623 FNDC4Q9H6D8 234 aaPredicted RBP9.05□□□□□ -0.96
CHMP3-209ENST00000494623 KAAG1Q9UBP8 84 aa9.05□□□□□ -0.96
CHMP3-209ENST00000494623 C8orf88P0DMB2 117 aa9.05□□□□□ -0.96
CHMP3-209ENST00000494623 COA6Q5JTJ3 125 aaKnown RBP9.05□□□□□ -0.96
CHMP3-209ENST00000494623 MORN5Q5VZ52 161 aa9.05□□□□□ -0.96
CHMP3-209ENST00000494623 C11orf42Q8N5U0 333 aa9.05□□□□□ -0.96
CHMP3-209ENST00000494623 OR4A5Q8NH83 315 aa9.05□□□□□ -0.96
CHMP3-209ENST00000494623 DNAJC4Q9NNZ3 241 aa9.05□□□□□ -0.96
CHMP3-209ENST00000494623 GATCO43716 136 aaKnown RBP9.04□□□□□ -0.96
CHMP3-209ENST00000494623 APELAP0DMC3 54 aa9.04□□□□□ -0.96
CHMP3-209ENST00000494623 GNG4P50150 75 aa9.04□□□□□ -0.96
CHMP3-209ENST00000494623 SUB1P53999 127 aaKnown RBP eCLIP9.04□□□□□ -0.96
CHMP3-209ENST00000494623 VMA21Q3ZAQ7 101 aa9.04□□□□□ -0.96
CHMP3-209ENST00000494623 CENPWQ5EE01 88 aa9.04□□□□□ -0.96
CHMP3-209ENST00000494623 ZNF596Q8TC21 504 aa9.04□□□□□ -0.96
CHMP3-209ENST00000494623 BTF3L4Q96K17 158 aa9.04□□□□□ -0.96
CHMP3-209ENST00000494623 VKORC1Q9BQB6 163 aa9.04□□□□□ -0.96
CHMP3-209ENST00000494623 C19orf24Q9BVV8 132 aa9.04□□□□□ -0.96
CHMP3-209ENST00000494623 TMEM133Q9H2Q1 129 aa9.04□□□□□ -0.96
CHMP3-209ENST00000494623 TLN1Q9Y490 2541 aaKnown RBP9.04□□□□□ -0.96
CHMP3-209ENST00000494623 FAM90A27PA6NNH2 459 aa9.04□□□□□ -0.96
CHMP3-209ENST00000494623 PRSS47A8MTI9 375 aa9.04□□□□□ -0.96
CHMP3-209ENST00000494623 B9A039 149 aa9.04□□□□□ -0.96
CHMP3-209ENST00000494623 C9JCJ5 164 aa9.04□□□□□ -0.96
CHMP3-209ENST00000494623 SNRPCP09234 159 aaKnown RBP9.04□□□□□ -0.96
CHMP3-209ENST00000494623 MC5RP33032 325 aa9.04□□□□□ -0.96
CHMP3-209ENST00000494623 PPOXP50336 477 aa9.04□□□□□ -0.96
CHMP3-209ENST00000494623 PDLIM4P50479 330 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms