RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 UAP1Q16222 522 aaPredicted RBP2.06□□□□□ -2.08
SMC4-224ENST00000494612 RGS21Q2M5E4 152 aa2.06□□□□□ -2.08
SMC4-224ENST00000494612 NCBP2-AS2Q69YL0 99 aa2.06□□□□□ -2.08
SMC4-224ENST00000494612 LAIR2Q6ISS4 152 aa2.06□□□□□ -2.08
SMC4-224ENST00000494612 HCP5Q6MZN7 132 aa2.06□□□□□ -2.08
SMC4-224ENST00000494612 PPP1R2P3Q6NXS1 205 aa2.06□□□□□ -2.08
SMC4-224ENST00000494612 TCF23Q7RTU1 214 aa2.06□□□□□ -2.08
SMC4-224ENST00000494612 OR5P3Q8WZ94 311 aa2.06□□□□□ -2.08
SMC4-224ENST00000494612 RNASE6Q93091 150 aaKnown RBP2.06□□□□□ -2.08
SMC4-224ENST00000494612 IMP4Q96G21 291 aaKnown RBP2.06□□□□□ -2.08
SMC4-224ENST00000494612 TRIB3Q96RU7 358 aa2.06□□□□□ -2.08
SMC4-224ENST00000494612 CCL19Q99731 98 aa2.06□□□□□ -2.08
SMC4-224ENST00000494612 DHRS9Q9BPW9 319 aa2.06□□□□□ -2.08
SMC4-224ENST00000494612 MROQ9BYG7 248 aa2.06□□□□□ -2.08
SMC4-224ENST00000494612 MAP1LC3AQ9H492 121 aa2.06□□□□□ -2.08
SMC4-224ENST00000494612 TRABDQ9H4I3 376 aa2.06□□□□□ -2.08
SMC4-224ENST00000494612 FAM96AQ9H5X1 160 aa2.06□□□□□ -2.08
SMC4-224ENST00000494612 BABAM2Q9NXR7 383 aa2.06□□□□□ -2.08
SMC4-224ENST00000494612 MCTS1Q9ULC4 181 aaKnown RBP2.06□□□□□ -2.08
SMC4-224ENST00000494612 HEY1Q9Y5J3 304 aa2.06□□□□□ -2.08
SMC4-224ENST00000494612 U3KQK5 164 aa2.06□□□□□ -2.08
SMC4-224ENST00000494612 FLNAP21333 2647 aaKnown RBP2.05□□□□□ -2.08
SMC4-224ENST00000494612 INTS1Q8N201 2190 aaKnown RBP2.05□□□□□ -2.08
SMC4-224ENST00000494612 SDHAF1A6NFY7 115 aa2.05□□□□□ -2.08
SMC4-224ENST00000494612 E7EQL1 145 aa2.05□□□□□ -2.08
SMC4-224ENST00000494612 H3BMM0 161 aa2.05□□□□□ -2.08
SMC4-224ENST00000494612 CXCR6O00574 342 aa2.05□□□□□ -2.08
SMC4-224ENST00000494612 TGOLN2O43493 480 aa2.05□□□□□ -2.08
SMC4-224ENST00000494612 STATHP02808 62 aa2.05□□□□□ -2.08
SMC4-224ENST00000494612 LINC00614P0C842 121 aa2.05□□□□□ -2.08
SMC4-224ENST00000494612 PEBP1P30086 187 aaKnown RBP2.05□□□□□ -2.08
SMC4-224ENST00000494612 CDKN2CP42773 168 aa2.05□□□□□ -2.08
SMC4-224ENST00000494612 HAAOP46952 286 aa2.05□□□□□ -2.08
SMC4-224ENST00000494612 AP2S1P53680 142 aaPredicted RBP2.05□□□□□ -2.08
SMC4-224ENST00000494612 OR4D2P58180 307 aa2.05□□□□□ -2.08
SMC4-224ENST00000494612 GABARAPL2P60520 117 aa2.05□□□□□ -2.08
SMC4-224ENST00000494612 SPIN4Q56A73 249 aa2.05□□□□□ -2.08
SMC4-224ENST00000494612 RPS19BP1Q86WX3 136 aaKnown RBP2.05□□□□□ -2.08
SMC4-224ENST00000494612 KRTAP13-1Q8IUC0 172 aa2.05□□□□□ -2.08
SMC4-224ENST00000494612 MSRB3Q8IXL7 192 aa2.05□□□□□ -2.08
SMC4-224ENST00000494612 C10orf67Q8IYJ2 551 aa2.05□□□□□ -2.08
SMC4-224ENST00000494612 OR5D18Q8NGL1 313 aa2.05□□□□□ -2.08
SMC4-224ENST00000494612 OR5K1Q8NHB7 308 aa2.05□□□□□ -2.08
SMC4-224ENST00000494612 SKA2Q8WVK7 121 aaPredicted RBP2.05□□□□□ -2.08
SMC4-224ENST00000494612 RAB8BQ92930 207 aa2.05□□□□□ -2.08
SMC4-224ENST00000494612 PTH2Q96A98 100 aa2.05□□□□□ -2.08
SMC4-224ENST00000494612 UBE2WQ96B02 151 aa2.05□□□□□ -2.08
SMC4-224ENST00000494612 DERL2Q9GZP9 239 aa2.05□□□□□ -2.08
SMC4-224ENST00000494612 OR51B6Q9H340 312 aa2.05□□□□□ -2.08
SMC4-224ENST00000494612 LRTM1Q9HBL6 345 aa2.05□□□□□ -2.08
SMC4-224ENST00000494612 TMEM216Q9P0N5 145 aa2.05□□□□□ -2.08
SMC4-224ENST00000494612 ZNF443Q9Y2A4 671 aaPredicted RBP2.05□□□□□ -2.08
SMC4-224ENST00000494612 ARL5AQ9Y689 179 aa2.05□□□□□ -2.08
SMC4-224ENST00000494612 ANK3Q12955 4377 aaKnown RBP2.05□□□□□ -2.08
SMC4-224ENST00000494612 ABCA4P78363 2273 aa2.05□□□□□ -2.08
SMC4-224ENST00000494612 FN1P02751 2386 aaKnown RBP2.05□□□□□ -2.08
SMC4-224ENST00000494612 ACANP16112 2415 aa2.05□□□□□ -2.08
SMC4-224ENST00000494612 NSD1Q96L73 2696 aaPredicted RBP2.04□□□□□ -2.08
SMC4-224ENST00000494612 LOC285095A0A1B0GVY8 99 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 H0YGG7 62 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 M0R036 132 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 TXNDC9O14530 226 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 HBZP02008 142 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 ISG15P05161 165 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 RPS17P08708 135 aaKnown RBP2.04□□□□□ -2.08
SMC4-224ENST00000494612 C8orf88P0DMB2 117 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 CTLA4P16410 223 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 LGALS3P17931 250 aaKnown RBP2.04□□□□□ -2.08
SMC4-224ENST00000494612 GADD45AP24522 165 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 CMPK1P30085 196 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 CD79BP40259 229 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 NKX2-5P52952 324 aaPredicted RBP2.04□□□□□ -2.08
SMC4-224ENST00000494612 TCL1AP56279 114 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 BASP1P80723 227 aaKnown RBP2.04□□□□□ -2.08
SMC4-224ENST00000494612 STX5Q13190 355 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 PDK2Q15119 407 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 TAF1AQ15573 450 aaPredicted RBP2.04□□□□□ -2.08
SMC4-224ENST00000494612 BCL2A1Q16548 175 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 SPATA31B1PQ5VZV4 182 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 CSPG4Q6UVK1 2322 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 LRRN1Q6UXK5 716 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 RASSF6Q6ZTQ3 369 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 FAM19A5Q7Z5A7 132 aaPredicted RBP2.04□□□□□ -2.08
SMC4-224ENST00000494612 COMMD7Q86VX2 200 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 LRP11Q86VZ4 500 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 HRNRQ86YZ3 2850 aaPredicted RBP2.04□□□□□ -2.08
SMC4-224ENST00000494612 LY6G5BQ8NDX9 201 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 OR13C4Q8NGS5 318 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 OR4A5Q8NH83 315 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 ZNRF2Q8NHG8 242 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 ASB13Q8WXK3 278 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 TAMM41Q96BW9 452 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 REEP6Q96HR9 211 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 CAPZA3Q96KX2 299 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 CCDC42Q96M95 316 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 GUCA1BQ9UMX6 200 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 FAM215AQ9Y5M1 114 aa2.04□□□□□ -2.08
SMC4-224ENST00000494612 SNRNP200O75643 2136 aaKnown RBP2.03□□□□□ -2.08
SMC4-224ENST00000494612 MXRA5Q9NR99 2828 aa2.03□□□□□ -2.08
SMC4-224ENST00000494612 IGLV10-54A0A075B6I4 117 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms