RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 TPPP2P59282 170 aa10.46□□□□□ -0.73
HDAC3-213ENST00000492506 MORN2Q502X0 79 aa10.46□□□□□ -0.73
HDAC3-213ENST00000492506 LINC01551Q86U37 167 aa10.46□□□□□ -0.73
HDAC3-213ENST00000492506 LINC00482Q8N8I6 264 aa10.46□□□□□ -0.73
HDAC3-213ENST00000492506 OR10AC1Q8NH08 325 aa10.46□□□□□ -0.73
HDAC3-213ENST00000492506 KCNG3Q8TAE7 436 aa10.46□□□□□ -0.73
HDAC3-213ENST00000492506 PIGCQ92535 297 aa10.46□□□□□ -0.73
HDAC3-213ENST00000492506 ABHD6Q9BV23 337 aa10.46□□□□□ -0.73
HDAC3-213ENST00000492506 VAMP8Q9BV40 100 aa10.46□□□□□ -0.73
HDAC3-213ENST00000492506 SMIM3Q9BZL3 60 aa10.46□□□□□ -0.73
HDAC3-213ENST00000492506 MAGT1Q9H0U3 335 aa10.46□□□□□ -0.73
HDAC3-213ENST00000492506 TCRBV4S1A1TA0A5B7 111 aa10.45□□□□□ -0.74
HDAC3-213ENST00000492506 FAM90A22PA8MWA6 464 aa10.45□□□□□ -0.74
HDAC3-213ENST00000492506 H7BYZ3 331 aa10.45□□□□□ -0.74
HDAC3-213ENST00000492506 QRFPP83859 136 aa10.45□□□□□ -0.74
HDAC3-213ENST00000492506 SLC25A24Q6NUK1 477 aa10.45□□□□□ -0.74
HDAC3-213ENST00000492506 ACP7Q6ZNF0 438 aa10.45□□□□□ -0.74
HDAC3-213ENST00000492506 CYP2G1PQ6ZSU1 146 aa10.45□□□□□ -0.74
HDAC3-213ENST00000492506 ZDHHC23Q8IYP9 409 aa10.45□□□□□ -0.74
HDAC3-213ENST00000492506 ZNF738Q8NE65 137 aa10.45□□□□□ -0.74
HDAC3-213ENST00000492506 OR11H6Q8NGC7 330 aa10.45□□□□□ -0.74
HDAC3-213ENST00000492506 OR51A4Q8NGJ6 313 aa10.45□□□□□ -0.74
HDAC3-213ENST00000492506 PGAM5Q96HS1 289 aa10.45□□□□□ -0.74
HDAC3-213ENST00000492506 MS4A10Q96PG2 267 aa10.45□□□□□ -0.74
HDAC3-213ENST00000492506 RARRES2Q99969 163 aa10.45□□□□□ -0.74
HDAC3-213ENST00000492506 ALKBH7Q9BT30 221 aaPredicted RBP10.45□□□□□ -0.74
HDAC3-213ENST00000492506 TSSC4Q9Y5U2 329 aaPredicted RBP10.45□□□□□ -0.74
HDAC3-213ENST00000492506 CSMD3Q7Z407 3707 aa10.45□□□□□ -0.74
HDAC3-213ENST00000492506 DUXBA0A1W2PPF3 345 aa10.44□□□□□ -0.74
HDAC3-213ENST00000492506 SERPINE3A8MV23 424 aa10.44□□□□□ -0.74
HDAC3-213ENST00000492506 CDS2O95674 445 aa10.44□□□□□ -0.74
HDAC3-213ENST00000492506 BCL2P10415 239 aa10.44□□□□□ -0.74
HDAC3-213ENST00000492506 ESDP10768 282 aa10.44□□□□□ -0.74
HDAC3-213ENST00000492506 CEBPDP49716 269 aaPredicted RBP10.44□□□□□ -0.74
HDAC3-213ENST00000492506 FAM90A2PQ658T7 463 aa10.44□□□□□ -0.74
HDAC3-213ENST00000492506 C10orf99Q6UWK7 81 aa10.44□□□□□ -0.74
HDAC3-213ENST00000492506 CALHM1Q8IU99 346 aa10.44□□□□□ -0.74
HDAC3-213ENST00000492506 LGI3Q8N145 548 aa10.44□□□□□ -0.74
HDAC3-213ENST00000492506 GVQW1Q8N7I0 195 aa10.44□□□□□ -0.74
HDAC3-213ENST00000492506 MOB1AQ9H8S9 216 aa10.44□□□□□ -0.74
HDAC3-213ENST00000492506 UQCR10Q9UDW1 63 aa10.44□□□□□ -0.74
HDAC3-213ENST00000492506 FUT9Q9Y231 359 aa10.44□□□□□ -0.74
HDAC3-213ENST00000492506 U3KQK5 164 aa10.44□□□□□ -0.74
HDAC3-213ENST00000492506 TRAV9-1A0A075B6T8 112 aa10.43□□□□□ -0.74
HDAC3-213ENST00000492506 TRAV30A0A087WSZ9 112 aa10.43□□□□□ -0.74
HDAC3-213ENST00000492506 F2RL2O00254 374 aa10.43□□□□□ -0.74
HDAC3-213ENST00000492506 ATP6V0CP27449 155 aa10.43□□□□□ -0.74
HDAC3-213ENST00000492506 PRDX2P32119 198 aa10.43□□□□□ -0.74
HDAC3-213ENST00000492506 GNG3P63215 75 aa10.43□□□□□ -0.74
HDAC3-213ENST00000492506 RPL19P84098 196 aaKnown RBP10.43□□□□□ -0.74
HDAC3-213ENST00000492506 CEACAM21Q3KPI0 293 aa10.43□□□□□ -0.74
HDAC3-213ENST00000492506 TMEM41BQ5BJD5 291 aa10.43□□□□□ -0.74
HDAC3-213ENST00000492506 DMRTC1Q5HYR2 192 aa10.43□□□□□ -0.74
HDAC3-213ENST00000492506 CCDC71LQ8N9Z2 235 aa10.43□□□□□ -0.74
HDAC3-213ENST00000492506 OR5B3Q8NH48 314 aa10.43□□□□□ -0.74
HDAC3-213ENST00000492506 RNASE8Q8TDE3 154 aaKnown RBP10.43□□□□□ -0.74
HDAC3-213ENST00000492506 ZNF488Q96MN9 340 aa10.43□□□□□ -0.74
HDAC3-213ENST00000492506 KCNK15Q9H427 330 aa10.43□□□□□ -0.74
HDAC3-213ENST00000492506 WFDC1Q9HC57 220 aa10.43□□□□□ -0.74
HDAC3-213ENST00000492506 OR6C3Q9NZP0 311 aa10.43□□□□□ -0.74
HDAC3-213ENST00000492506 SLC45A2Q9UMX9 530 aa10.43□□□□□ -0.74
HDAC3-213ENST00000492506 LOC107986453A0A1B0GWG9 222 aa10.42□□□□□ -0.74
HDAC3-213ENST00000492506 TMEM250H0YL14 139 aa10.42□□□□□ -0.74
HDAC3-213ENST00000492506 C3orf84H3BNL1 204 aa10.42□□□□□ -0.74
HDAC3-213ENST00000492506 NHLRC4P0CG21 123 aaPredicted RBP10.42□□□□□ -0.74
HDAC3-213ENST00000492506 GALR1P47211 349 aa10.42□□□□□ -0.74
HDAC3-213ENST00000492506 RAB11AP62491 216 aa10.42□□□□□ -0.74
HDAC3-213ENST00000492506 EWSR1Q01844 656 aaKnown RBP eCLIP10.42□□□□□ -0.74
HDAC3-213ENST00000492506 MPV17LQ2QL34 196 aa10.42□□□□□ -0.74
HDAC3-213ENST00000492506 TOMM20LQ6UXN7 152 aa10.42□□□□□ -0.74
HDAC3-213ENST00000492506 RNF144BQ7Z419 303 aa10.42□□□□□ -0.74
HDAC3-213ENST00000492506 CMTM1Q8IZ96 169 aa10.42□□□□□ -0.74
HDAC3-213ENST00000492506 OR8B12Q8NGG6 310 aa10.42□□□□□ -0.74
HDAC3-213ENST00000492506 OR2T10Q8NGZ9 312 aa10.42□□□□□ -0.74
HDAC3-213ENST00000492506 MBD3L1Q8WWY6 194 aa10.42□□□□□ -0.74
HDAC3-213ENST00000492506 EHFQ9NZC4 300 aa10.42□□□□□ -0.74
HDAC3-213ENST00000492506 HILPDAQ9Y5L2 63 aa10.42□□□□□ -0.74
HDAC3-213ENST00000492506 SCGB1D2O95969 90 aa10.41□□□□□ -0.74
HDAC3-213ENST00000492506 RBP4P02753 201 aa10.41□□□□□ -0.74
HDAC3-213ENST00000492506 H2BFMP0C1H6 154 aa10.41□□□□□ -0.74
HDAC3-213ENST00000492506 IGHV1-8P0DP01 117 aa10.41□□□□□ -0.74
HDAC3-213ENST00000492506 GNB3P16520 340 aa10.41□□□□□ -0.74
HDAC3-213ENST00000492506 DTYMKP23919 212 aa10.41□□□□□ -0.74
HDAC3-213ENST00000492506 UNC119Q13432 240 aa10.41□□□□□ -0.74
HDAC3-213ENST00000492506 ARFRP1Q13795 201 aa10.41□□□□□ -0.74
HDAC3-213ENST00000492506 SMIM21Q3B7S5 101 aa10.41□□□□□ -0.74
HDAC3-213ENST00000492506 ETFRF1Q6IPR1 90 aa10.41□□□□□ -0.74
HDAC3-213ENST00000492506 TCF23Q7RTU1 214 aa10.41□□□□□ -0.74
HDAC3-213ENST00000492506 OR2C3Q8N628 320 aa10.41□□□□□ -0.74
HDAC3-213ENST00000492506 OR5A2Q8NGI9 324 aa10.41□□□□□ -0.74
HDAC3-213ENST00000492506 OR51G1Q8NGK1 321 aa10.41□□□□□ -0.74
HDAC3-213ENST00000492506 OR5D14Q8NGL3 314 aa10.41□□□□□ -0.74
HDAC3-213ENST00000492506 PARP12Q9H0J9 701 aaKnown RBP10.41□□□□□ -0.74
HDAC3-213ENST00000492506 NAA60Q9H7X0 242 aa10.41□□□□□ -0.74
HDAC3-213ENST00000492506 BET1LQ9NYM9 111 aa10.41□□□□□ -0.74
HDAC3-213ENST00000492506 OR5B21A6NL26 309 aa10.4□□□□□ -0.74
HDAC3-213ENST00000492506 K7ERU9 68 aa10.4□□□□□ -0.74
HDAC3-213ENST00000492506 AMY1AP04745 511 aa10.4□□□□□ -0.74
HDAC3-213ENST00000492506 ZNF728P0DKX0 622 aa10.4□□□□□ -0.74
HDAC3-213ENST00000492506 UCP1P25874 307 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms