RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 HINT2Q9BX68 163 aa6.18□□□□□ -1.42
SMARCB1-207ENST00000491967 NAA50Q9GZZ1 169 aaKnown RBP6.18□□□□□ -1.42
SMARCB1-207ENST00000491967 MAP6D1Q9H9H5 199 aa6.18□□□□□ -1.42
SMARCB1-207ENST00000491967 AGRNO00468 2067 aa6.18□□□□□ -1.42
SMARCB1-207ENST00000491967 TRAV14DV4A0A0A6YYC5 116 aa6.17□□□□□ -1.42
SMARCB1-207ENST00000491967 TRAV2A0A0B4J234 112 aa6.17□□□□□ -1.42
SMARCB1-207ENST00000491967 M0QYG6 137 aa6.17□□□□□ -1.42
SMARCB1-207ENST00000491967 B3GALNT1O75752 331 aa6.17□□□□□ -1.42
SMARCB1-207ENST00000491967 CD3DP04234 171 aa6.17□□□□□ -1.42
SMARCB1-207ENST00000491967 UCP1P25874 307 aa6.17□□□□□ -1.42
SMARCB1-207ENST00000491967 RPL5P46777 297 aaKnown RBP6.17□□□□□ -1.42
SMARCB1-207ENST00000491967 PIGPP57054 158 aa6.17□□□□□ -1.42
SMARCB1-207ENST00000491967 ERHP84090 104 aaKnown RBP6.17□□□□□ -1.42
SMARCB1-207ENST00000491967 SSBP1Q04837 148 aaKnown RBP6.17□□□□□ -1.42
SMARCB1-207ENST00000491967 IZUMO4Q1ZYL8 232 aa6.17□□□□□ -1.42
SMARCB1-207ENST00000491967 Q56UQ5 140 aa6.17□□□□□ -1.42
SMARCB1-207ENST00000491967 MZT2AQ6P582 158 aa6.17□□□□□ -1.42
SMARCB1-207ENST00000491967 TOMM20LQ6UXN7 152 aa6.17□□□□□ -1.42
SMARCB1-207ENST00000491967 LYG2Q86SG7 212 aa6.17□□□□□ -1.42
SMARCB1-207ENST00000491967 LILRB2Q8N423 598 aa6.17□□□□□ -1.42
SMARCB1-207ENST00000491967 OR4D10Q8NGI6 311 aa6.17□□□□□ -1.42
SMARCB1-207ENST00000491967 OR52I2Q8NH67 350 aa6.17□□□□□ -1.42
SMARCB1-207ENST00000491967 C15orf40Q8WUR7 153 aa6.17□□□□□ -1.42
SMARCB1-207ENST00000491967 AP3S1Q92572 193 aa6.17□□□□□ -1.42
SMARCB1-207ENST00000491967 GALNT14Q96FL9 552 aa6.17□□□□□ -1.42
SMARCB1-207ENST00000491967 C20orf24Q9BUV8 137 aa6.17□□□□□ -1.42
SMARCB1-207ENST00000491967 ZFAND3Q9H8U3 227 aa6.17□□□□□ -1.42
SMARCB1-207ENST00000491967 UBQLN2Q9UHD9 624 aa6.17□□□□□ -1.42
SMARCB1-207ENST00000491967 ALMS1Q8TCU4 4167 aa6.17□□□□□ -1.42
SMARCB1-207ENST00000491967 IGHV3OR16-8A0A075B7F1 116 aa6.16□□□□□ -1.42
SMARCB1-207ENST00000491967 A0A0J9YWU9 116 aa6.16□□□□□ -1.42
SMARCB1-207ENST00000491967 C3orf85A0A1B0GTC6 90 aa6.16□□□□□ -1.42
SMARCB1-207ENST00000491967 ST8SIA3O43173 380 aa6.16□□□□□ -1.42
SMARCB1-207ENST00000491967 ZNF207O43670 478 aaKnown RBP6.16□□□□□ -1.42
SMARCB1-207ENST00000491967 CDS2O95674 445 aa6.16□□□□□ -1.42
SMARCB1-207ENST00000491967 TMEM50AO95807 157 aa6.16□□□□□ -1.42
SMARCB1-207ENST00000491967 RNASE2P10153 161 aaKnown RBP6.16□□□□□ -1.42
SMARCB1-207ENST00000491967 PI3P19957 117 aa6.16□□□□□ -1.42
SMARCB1-207ENST00000491967 ALDH3B2P48448 385 aa6.16□□□□□ -1.42
SMARCB1-207ENST00000491967 RNASE10Q5GAN6 216 aaKnown RBP6.16□□□□□ -1.42
SMARCB1-207ENST00000491967 GPR107Q5VW38 600 aa6.16□□□□□ -1.42
SMARCB1-207ENST00000491967 Q6ZRM9 215 aa6.16□□□□□ -1.42
SMARCB1-207ENST00000491967 STPG3Q8N7X2 389 aa6.16□□□□□ -1.42
SMARCB1-207ENST00000491967 TMEM229BQ8NBD8 167 aa6.16□□□□□ -1.42
SMARCB1-207ENST00000491967 UBAC2Q8NBM4 344 aa6.16□□□□□ -1.42
SMARCB1-207ENST00000491967 OR52E5Q8NH55 327 aa6.16□□□□□ -1.42
SMARCB1-207ENST00000491967 LINC00476Q8WZB0 136 aa6.16□□□□□ -1.42
SMARCB1-207ENST00000491967 MISP3Q96FF7 219 aa6.16□□□□□ -1.42
SMARCB1-207ENST00000491967 MRPS26Q9BYN8 205 aaKnown RBP6.16□□□□□ -1.42
SMARCB1-207ENST00000491967 MIXL1Q9H2W2 232 aa6.16□□□□□ -1.42
SMARCB1-207ENST00000491967 FNDC4Q9H6D8 234 aaPredicted RBP6.16□□□□□ -1.42
SMARCB1-207ENST00000491967 PLECQ15149 4684 aaKnown RBP6.16□□□□□ -1.42
SMARCB1-207ENST00000491967 A0A0G2JRQ6 117 aa6.15□□□□□ -1.42
SMARCB1-207ENST00000491967 A0A1B0GU03 582 aa6.15□□□□□ -1.42
SMARCB1-207ENST00000491967 NUPR2A6NF83 97 aa6.15□□□□□ -1.42
SMARCB1-207ENST00000491967 GABARAPH6UMI1 98 aa6.15□□□□□ -1.42
SMARCB1-207ENST00000491967 CORTO00230 105 aa6.15□□□□□ -1.42
SMARCB1-207ENST00000491967 DFFBO76075 338 aa6.15□□□□□ -1.42
SMARCB1-207ENST00000491967 ATG12O94817 140 aa6.15□□□□□ -1.42
SMARCB1-207ENST00000491967 IGHV3-48P01763 117 aa6.15□□□□□ -1.42
SMARCB1-207ENST00000491967 APOHP02749 345 aaPredicted RBP6.15□□□□□ -1.42
SMARCB1-207ENST00000491967 NPBWR1P48145 328 aa6.15□□□□□ -1.42
SMARCB1-207ENST00000491967 SURF2Q15527 256 aaPredicted RBP6.15□□□□□ -1.42
SMARCB1-207ENST00000491967 DEFB135Q30KP9 77 aa6.15□□□□□ -1.42
SMARCB1-207ENST00000491967 CEMP1Q6PRD7 247 aaPredicted RBP6.15□□□□□ -1.42
SMARCB1-207ENST00000491967 ZNF600Q6ZNG1 722 aa6.15□□□□□ -1.42
SMARCB1-207ENST00000491967 DUSP18Q8NEJ0 188 aa6.15□□□□□ -1.42
SMARCB1-207ENST00000491967 OR13C8Q8NGS7 320 aa6.15□□□□□ -1.42
SMARCB1-207ENST00000491967 OR4X1Q8NH49 305 aa6.15□□□□□ -1.42
SMARCB1-207ENST00000491967 ZFAND1Q8TCF1 268 aa6.15□□□□□ -1.42
SMARCB1-207ENST00000491967 GLYATL2Q8WU03 294 aa6.15□□□□□ -1.42
SMARCB1-207ENST00000491967 GATAD1Q8WUU5 269 aa6.15□□□□□ -1.42
SMARCB1-207ENST00000491967 RTBDNQ9BSG5 229 aaPredicted RBP6.15□□□□□ -1.42
SMARCB1-207ENST00000491967 CSTL1Q9H114 145 aa6.15□□□□□ -1.42
SMARCB1-207ENST00000491967 MRPL36Q9P0J6 103 aaKnown RBP6.15□□□□□ -1.42
SMARCB1-207ENST00000491967 EXTL2Q9UBQ6 330 aa6.15□□□□□ -1.42
SMARCB1-207ENST00000491967 U3KQE9 123 aa6.15□□□□□ -1.42
SMARCB1-207ENST00000491967 FAM25AB3EWG3 89 aa6.14□□□□□ -1.43
SMARCB1-207ENST00000491967 FAM25CB3EWG5 89 aa6.14□□□□□ -1.43
SMARCB1-207ENST00000491967 FAM25GB3EWG6 89 aa6.14□□□□□ -1.43
SMARCB1-207ENST00000491967 CTDSPLO15194 276 aa6.14□□□□□ -1.43
SMARCB1-207ENST00000491967 GNG7O60262 68 aa6.14□□□□□ -1.43
SMARCB1-207ENST00000491967 CLN5O75503 358 aa6.14□□□□□ -1.43
SMARCB1-207ENST00000491967 IGKV1-17P01599 117 aa6.14□□□□□ -1.43
SMARCB1-207ENST00000491967 PGAM2P15259 253 aa6.14□□□□□ -1.43
SMARCB1-207ENST00000491967 CRYBB3P26998 211 aa6.14□□□□□ -1.43
SMARCB1-207ENST00000491967 SNCAP37840 140 aa6.14□□□□□ -1.43
SMARCB1-207ENST00000491967 ETV6P41212 452 aa6.14□□□□□ -1.43
SMARCB1-207ENST00000491967 TAS2R19P59542 299 aa6.14□□□□□ -1.43
SMARCB1-207ENST00000491967 MRPS10P82664 201 aaKnown RBP6.14□□□□□ -1.43
SMARCB1-207ENST00000491967 ZNF124Q15973 351 aa6.14□□□□□ -1.43
SMARCB1-207ENST00000491967 SP6Q3SY56 376 aa6.14□□□□□ -1.43
SMARCB1-207ENST00000491967 STEAP1BQ6NZ63 245 aa6.14□□□□□ -1.43
SMARCB1-207ENST00000491967 APRG1Q8IVJ8 170 aa6.14□□□□□ -1.43
SMARCB1-207ENST00000491967 FAM219AQ8IW50 185 aa6.14□□□□□ -1.43
SMARCB1-207ENST00000491967 CCDC71LQ8N9Z2 235 aa6.14□□□□□ -1.43
SMARCB1-207ENST00000491967 LHFPL5Q8TAF8 219 aa6.14□□□□□ -1.43
SMARCB1-207ENST00000491967 ST8SIA2Q92186 375 aa6.14□□□□□ -1.43
SMARCB1-207ENST00000491967 GINS3Q9BRX5 216 aa6.14□□□□□ -1.43
SMARCB1-207ENST00000491967 TMEM222Q9H0R3 208 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms