RNA–Protein interactions for RNA: ENST00000490677.1

HOXB3-211, Transcript of homeobox B3, humanhuman

TSL 1 (best) BASIC

Gene HOXB3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-211ENST00000490677 MRPS26Q9BYN8 205 aaKnown RBP20.62■□□□□ 0.89
HOXB3-211ENST00000490677 A0A0G2JRQ6 117 aa20.61■□□□□ 0.89
HOXB3-211ENST00000490677 IGHV7-4-1A0A0J9YVY3 117 aa20.61■□□□□ 0.89
HOXB3-211ENST00000490677 C3orf85A0A1B0GTC6 90 aa20.61■□□□□ 0.89
HOXB3-211ENST00000490677 CTDSP2O14595 271 aa20.61■□□□□ 0.89
HOXB3-211ENST00000490677 CHEK1O14757 476 aa20.61■□□□□ 0.89
HOXB3-211ENST00000490677 ST8SIA3O43173 380 aa20.61■□□□□ 0.89
HOXB3-211ENST00000490677 CTSDP07339 412 aaPredicted RBP20.61■□□□□ 0.89
HOXB3-211ENST00000490677 UCP1P25874 307 aa20.61■□□□□ 0.89
HOXB3-211ENST00000490677 LAMTOR1Q6IAA8 161 aa20.61■□□□□ 0.89
HOXB3-211ENST00000490677 GABARAPH6UMI1 98 aa20.6■□□□□ 0.89
HOXB3-211ENST00000490677 NUPL2O15504 423 aaKnown RBP20.6■□□□□ 0.89
HOXB3-211ENST00000490677 TAS2R19P59542 299 aa20.6■□□□□ 0.89
HOXB3-211ENST00000490677 RELQ04864 619 aaPredicted RBP20.6■□□□□ 0.89
HOXB3-211ENST00000490677 SP6Q3SY56 376 aa20.6■□□□□ 0.89
HOXB3-211ENST00000490677 IL17DQ8TAD2 202 aa20.6■□□□□ 0.89
HOXB3-211ENST00000490677 ERHP84090 104 aaKnown RBP20.59■□□□□ 0.89
HOXB3-211ENST00000490677 FAM90A2PQ658T7 463 aa20.59■□□□□ 0.89
HOXB3-211ENST00000490677 FAAP20Q6NZ36 180 aa20.59■□□□□ 0.89
HOXB3-211ENST00000490677 STEAP1BQ6NZ63 245 aa20.59■□□□□ 0.89
HOXB3-211ENST00000490677 WFDC3Q8IUB2 231 aa20.59■□□□□ 0.89
HOXB3-211ENST00000490677 MARCH1Q8TCQ1 289 aa20.59■□□□□ 0.89
HOXB3-211ENST00000490677 C15orf40Q8WUR7 153 aa20.59■□□□□ 0.89
HOXB3-211ENST00000490677 PINX1Q96BK5 328 aaKnown RBP20.59■□□□□ 0.89
HOXB3-211ENST00000490677 RHPN1-AS1Q9BWJ2 59 aa20.59■□□□□ 0.89
HOXB3-211ENST00000490677 RAB3DO95716 219 aa20.58■□□□□ 0.89
HOXB3-211ENST00000490677 Q6ZRM9 215 aa20.58■□□□□ 0.89
HOXB3-211ENST00000490677 TMEM116Q8NCL8 245 aa20.58■□□□□ 0.89
HOXB3-211ENST00000490677 IGHV3-49A0A0A0MS15 119 aa20.57■□□□□ 0.88
HOXB3-211ENST00000490677 OR4C46A6NHA9 309 aa20.57■□□□□ 0.88
HOXB3-211ENST00000490677 RNASE2P10153 161 aaKnown RBP20.57■□□□□ 0.88
HOXB3-211ENST00000490677 AKR1C2P52895 323 aa20.57■□□□□ 0.88
HOXB3-211ENST00000490677 SSBP1Q04837 148 aaKnown RBP20.57■□□□□ 0.88
HOXB3-211ENST00000490677 Q6ZWC4 215 aa20.57■□□□□ 0.88
HOXB3-211ENST00000490677 GPR141Q7Z602 305 aa20.57■□□□□ 0.88
HOXB3-211ENST00000490677 ZFAND1Q8TCF1 268 aa20.57■□□□□ 0.88
HOXB3-211ENST00000490677 RTBDNQ9BSG5 229 aaPredicted RBP20.57■□□□□ 0.88
HOXB3-211ENST00000490677 COPZ2Q9P299 210 aa20.57■□□□□ 0.88
HOXB3-211ENST00000490677 TP53TG1Q9Y2A0 90 aa20.57■□□□□ 0.88
HOXB3-211ENST00000490677 EWSR1Q01844 656 aaKnown RBP eCLIP20.56■□□□□ 0.88
HOXB3-211ENST00000490677 SCGB2B2Q4G0G5 96 aa20.56■□□□□ 0.88
HOXB3-211ENST00000490677 AARDQ4LEZ3 155 aa20.56■□□□□ 0.88
HOXB3-211ENST00000490677 TOMM20LQ6UXN7 152 aa20.56■□□□□ 0.88
HOXB3-211ENST00000490677 LHFPL5Q8TAF8 219 aa20.56■□□□□ 0.88
HOXB3-211ENST00000490677 SMIM4Q8WVI0 70 aa20.56■□□□□ 0.88
HOXB3-211ENST00000490677 ZFAND3Q9H8U3 227 aa20.56■□□□□ 0.88
HOXB3-211ENST00000490677 MRPL36Q9P0J6 103 aaKnown RBP20.56■□□□□ 0.88
HOXB3-211ENST00000490677 GNG7O60262 68 aa20.55■□□□□ 0.88
HOXB3-211ENST00000490677 ETV6P41212 452 aa20.55■□□□□ 0.88
HOXB3-211ENST00000490677 BSXQ3C1V8 233 aa20.55■□□□□ 0.88
HOXB3-211ENST00000490677 SLC35G3Q8N808 338 aa20.55■□□□□ 0.88
HOXB3-211ENST00000490677 CCDC71LQ8N9Z2 235 aa20.55■□□□□ 0.88
HOXB3-211ENST00000490677 DYNC2LI1Q8TCX1 351 aa20.55■□□□□ 0.88
HOXB3-211ENST00000490677 FNDC4Q9H6D8 234 aaPredicted RBP20.55■□□□□ 0.88
HOXB3-211ENST00000490677 TRAV14DV4A0A0A6YYC5 116 aa20.54■□□□□ 0.88
HOXB3-211ENST00000490677 KIR2DL5BA0A0G2JN68 375 aa20.54■□□□□ 0.88
HOXB3-211ENST00000490677 KIR2DL5BA0A0G2JPC4 375 aa20.54■□□□□ 0.88
HOXB3-211ENST00000490677 RGS5O15539 181 aa20.54■□□□□ 0.88
HOXB3-211ENST00000490677 YIF1AO95070 293 aa20.54■□□□□ 0.88
HOXB3-211ENST00000490677 CDS2O95674 445 aa20.54■□□□□ 0.88
HOXB3-211ENST00000490677 APOC4P55056 127 aa20.54■□□□□ 0.88
HOXB3-211ENST00000490677 MRPS10P82664 201 aaKnown RBP20.54■□□□□ 0.88
HOXB3-211ENST00000490677 ZNF124Q15973 351 aa20.54■□□□□ 0.88
HOXB3-211ENST00000490677 KIR2DL5AQ8N109 375 aa20.54■□□□□ 0.88
HOXB3-211ENST00000490677 LILRB2Q8N423 598 aa20.54■□□□□ 0.88
HOXB3-211ENST00000490677 KIR2DL5BQ8NHK3 375 aa20.54■□□□□ 0.88
HOXB3-211ENST00000490677 GLYATL2Q8WU03 294 aa20.54■□□□□ 0.88
HOXB3-211ENST00000490677 TMEM222Q9H0R3 208 aa20.54■□□□□ 0.88
HOXB3-211ENST00000490677 IGHV3OR16-13A0A075B7E8 117 aa20.53■□□□□ 0.88
HOXB3-211ENST00000490677 IGHV3-74A0A0B4J1X5 117 aa20.53■□□□□ 0.88
HOXB3-211ENST00000490677 IFNA17P01571 189 aa20.53■□□□□ 0.88
HOXB3-211ENST00000490677 APOHP02749 345 aaPredicted RBP20.53■□□□□ 0.88
HOXB3-211ENST00000490677 TRIM16LQ309B1 348 aa20.53■□□□□ 0.88
HOXB3-211ENST00000490677 DEFB135Q30KP9 77 aa20.53■□□□□ 0.88
HOXB3-211ENST00000490677 APRG1Q8IVJ8 170 aa20.53■□□□□ 0.88
HOXB3-211ENST00000490677 VSIRQ9H7M9 311 aa20.53■□□□□ 0.88
HOXB3-211ENST00000490677 A0A1B0GU03 582 aa20.52■□□□□ 0.88
HOXB3-211ENST00000490677 UBE2CO00762 179 aa20.52■□□□□ 0.88
HOXB3-211ENST00000490677 CTDSPLO15194 276 aa20.52■□□□□ 0.88
HOXB3-211ENST00000490677 SPRY2O43597 315 aa20.52■□□□□ 0.88
HOXB3-211ENST00000490677 B3GALNT1O75752 331 aa20.52■□□□□ 0.88
HOXB3-211ENST00000490677 ATG12O94817 140 aa20.52■□□□□ 0.88
HOXB3-211ENST00000490677 TMEM50AO95807 157 aa20.52■□□□□ 0.88
HOXB3-211ENST00000490677 OR5AC1P0C628 307 aa20.52■□□□□ 0.88
HOXB3-211ENST00000490677 SNCAP37840 140 aa20.52■□□□□ 0.88
HOXB3-211ENST00000490677 MEF2DQ14814 521 aa20.52■□□□□ 0.88
HOXB3-211ENST00000490677 OR4C16Q8NGL9 310 aa20.52■□□□□ 0.88
HOXB3-211ENST00000490677 MAP6D1Q9H9H5 199 aa20.52■□□□□ 0.88
HOXB3-211ENST00000490677 BIRC6Q9NR09 4857 aa20.51■□□□□ 0.87
HOXB3-211ENST00000490677 AGRNO00468 2067 aa20.51■□□□□ 0.87
HOXB3-211ENST00000490677 NPBWR1P48145 328 aa20.51■□□□□ 0.87
HOXB3-211ENST00000490677 TNFRSF9Q07011 255 aa20.51■□□□□ 0.87
HOXB3-211ENST00000490677 MLANAQ16655 118 aa20.51■□□□□ 0.87
HOXB3-211ENST00000490677 CLVS1Q8IUQ0 354 aaPredicted RBP20.51■□□□□ 0.87
HOXB3-211ENST00000490677 DUSP18Q8NEJ0 188 aa20.51■□□□□ 0.87
HOXB3-211ENST00000490677 ST8SIA2Q92186 375 aa20.51■□□□□ 0.87
HOXB3-211ENST00000490677 RNF183Q96D59 192 aa20.51■□□□□ 0.87
HOXB3-211ENST00000490677 GALNT14Q96FL9 552 aa20.51■□□□□ 0.87
HOXB3-211ENST00000490677 NAA60Q9H7X0 242 aa20.51■□□□□ 0.87
HOXB3-211ENST00000490677 CCDC59Q9P031 241 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms