RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 FHL3Q13643 280 aa9.61□□□□□ -0.87
COL4A5-206ENST00000489230 EXOSC2Q13868 293 aaKnown RBP9.61□□□□□ -0.87
COL4A5-206ENST00000489230 LINC00482Q8N8I6 264 aa9.61□□□□□ -0.87
COL4A5-206ENST00000489230 CIB3Q96Q77 187 aaPredicted RBP9.61□□□□□ -0.87
COL4A5-206ENST00000489230 TXN2Q99757 166 aa9.61□□□□□ -0.87
COL4A5-206ENST00000489230 NOTCH1P46531 2555 aa9.6□□□□□ -0.87
COL4A5-206ENST00000489230 ANKRD34BA5PLL1 514 aa9.6□□□□□ -0.87
COL4A5-206ENST00000489230 GGCTO75223 188 aaKnown RBP9.6□□□□□ -0.87
COL4A5-206ENST00000489230 CLEC3BP05452 202 aa9.6□□□□□ -0.87
COL4A5-206ENST00000489230 DCTN2Q13561 401 aaKnown RBP9.6□□□□□ -0.87
COL4A5-206ENST00000489230 DEFB136Q30KP8 78 aa9.6□□□□□ -0.87
COL4A5-206ENST00000489230 SPINK9Q5DT21 86 aa9.6□□□□□ -0.87
COL4A5-206ENST00000489230 ETV3LQ6ZN32 361 aa9.6□□□□□ -0.87
COL4A5-206ENST00000489230 UXS1Q8NBZ7 420 aa9.6□□□□□ -0.87
COL4A5-206ENST00000489230 OR52B4Q8NGK2 314 aa9.6□□□□□ -0.87
COL4A5-206ENST00000489230 DTD1Q8TEA8 209 aa9.6□□□□□ -0.87
COL4A5-206ENST00000489230 RPS10-NUDT3A0A1W2PQS6 291 aa9.59□□□□□ -0.87
COL4A5-206ENST00000489230 SCGB2A1O75556 95 aa9.59□□□□□ -0.87
COL4A5-206ENST00000489230 ADAP1O75689 374 aa9.59□□□□□ -0.87
COL4A5-206ENST00000489230 MFAP4P55083 255 aa9.59□□□□□ -0.87
COL4A5-206ENST00000489230 ID3Q02535 119 aa9.59□□□□□ -0.87
COL4A5-206ENST00000489230 RPEL1Q2QD12 228 aa9.59□□□□□ -0.87
COL4A5-206ENST00000489230 BSXQ3C1V8 233 aa9.59□□□□□ -0.87
COL4A5-206ENST00000489230 C2orf83Q53S99 150 aa9.59□□□□□ -0.87
COL4A5-206ENST00000489230 PVRIGQ6DKI7 326 aa9.59□□□□□ -0.87
COL4A5-206ENST00000489230 ETFRF1Q6IPR1 90 aa9.59□□□□□ -0.87
COL4A5-206ENST00000489230 SPSB3Q6PJ21 355 aa9.59□□□□□ -0.87
COL4A5-206ENST00000489230 RNASEH2CQ8TDP1 164 aaKnown RBP9.59□□□□□ -0.87
COL4A5-206ENST00000489230 SCARB1Q8WTV0 552 aa9.59□□□□□ -0.87
COL4A5-206ENST00000489230 MISP3Q96FF7 219 aa9.59□□□□□ -0.87
COL4A5-206ENST00000489230 DUX3Q96PT4 197 aa9.59□□□□□ -0.87
COL4A5-206ENST00000489230 SEC22CQ9BRL7 303 aa9.59□□□□□ -0.87
COL4A5-206ENST00000489230 ELOVL1Q9BW60 279 aa9.59□□□□□ -0.87
COL4A5-206ENST00000489230 RBKSQ9H477 322 aa9.59□□□□□ -0.87
COL4A5-206ENST00000489230 C21orf62Q9NYP8 219 aa9.59□□□□□ -0.87
COL4A5-206ENST00000489230 WNK1Q9H4A3 2382 aa9.59□□□□□ -0.87
COL4A5-206ENST00000489230 IGHV4OR15-8A0A075B7B6 117 aa9.58□□□□□ -0.88
COL4A5-206ENST00000489230 A0A087WW49 117 aa9.58□□□□□ -0.88
COL4A5-206ENST00000489230 WRBO00258 174 aa9.58□□□□□ -0.88
COL4A5-206ENST00000489230 OVOL1O14753 267 aa9.58□□□□□ -0.88
COL4A5-206ENST00000489230 SYNGR2O43760 224 aa9.58□□□□□ -0.88
COL4A5-206ENST00000489230 IFNA10P01566 189 aa9.58□□□□□ -0.88
COL4A5-206ENST00000489230 RNASE2P10153 161 aaKnown RBP9.58□□□□□ -0.88
COL4A5-206ENST00000489230 HOXD3P31249 432 aaPredicted RBP9.58□□□□□ -0.88
COL4A5-206ENST00000489230 FCGR2BP31994 310 aaPredicted RBP9.58□□□□□ -0.88
COL4A5-206ENST00000489230 NKX2-1P43699 371 aaPredicted RBP9.58□□□□□ -0.88
COL4A5-206ENST00000489230 NPBWR1P48145 328 aa9.58□□□□□ -0.88
COL4A5-206ENST00000489230 INSL3P51460 131 aa9.58□□□□□ -0.88
COL4A5-206ENST00000489230 MFAP2P55001 183 aa9.58□□□□□ -0.88
COL4A5-206ENST00000489230 RAB11AP62491 216 aa9.58□□□□□ -0.88
COL4A5-206ENST00000489230 KLF5Q13887 457 aaPredicted RBP9.58□□□□□ -0.88
COL4A5-206ENST00000489230 IAH1Q2TAA2 248 aaPredicted RBP9.58□□□□□ -0.88
COL4A5-206ENST00000489230 FAM106AQ4KMX7 169 aa9.58□□□□□ -0.88
COL4A5-206ENST00000489230 CLEC19AQ6UXS0 136 aa9.58□□□□□ -0.88
COL4A5-206ENST00000489230 GSG1LQ6UXU4 331 aa9.58□□□□□ -0.88
COL4A5-206ENST00000489230 C19orf35Q6ZS72 473 aa9.58□□□□□ -0.88
COL4A5-206ENST00000489230 GPHB5Q86YW7 130 aa9.58□□□□□ -0.88
COL4A5-206ENST00000489230 C1QL4Q86Z23 238 aa9.58□□□□□ -0.88
COL4A5-206ENST00000489230 SLC24A4Q8NFF2 622 aa9.58□□□□□ -0.88
COL4A5-206ENST00000489230 ZNF502Q8TBZ5 544 aa9.58□□□□□ -0.88
COL4A5-206ENST00000489230 GSKIPQ9P0R6 139 aa9.58□□□□□ -0.88
COL4A5-206ENST00000489230 DMRT1Q9Y5R6 373 aa9.58□□□□□ -0.88
COL4A5-206ENST00000489230 C5orf51A6NDU8 294 aa9.57□□□□□ -0.88
COL4A5-206ENST00000489230 I3L2K1 104 aa9.57□□□□□ -0.88
COL4A5-206ENST00000489230 K7EIM0 57 aa9.57□□□□□ -0.88
COL4A5-206ENST00000489230 MT-CO2P00403 227 aa9.57□□□□□ -0.88
COL4A5-206ENST00000489230 ARL3P36405 182 aa9.57□□□□□ -0.88
COL4A5-206ENST00000489230 CYCSP99999 105 aaKnown RBP9.57□□□□□ -0.88
COL4A5-206ENST00000489230 RGS21Q2M5E4 152 aa9.57□□□□□ -0.88
COL4A5-206ENST00000489230 DCUN1D4Q92564 292 aa9.57□□□□□ -0.88
COL4A5-206ENST00000489230 DLX4Q92988 240 aaPredicted RBP9.57□□□□□ -0.88
COL4A5-206ENST00000489230 BSCL2Q96G97 398 aaPredicted RBP9.57□□□□□ -0.88
COL4A5-206ENST00000489230 PEMTQ9UBM1 199 aa9.57□□□□□ -0.88
COL4A5-206ENST00000489230 TRAV30A0A087WSZ9 112 aa9.56□□□□□ -0.88
COL4A5-206ENST00000489230 MFSD2BA6NFX1 497 aa9.56□□□□□ -0.88
COL4A5-206ENST00000489230 FAM25EA8MYX2 175 aa9.56□□□□□ -0.88
COL4A5-206ENST00000489230 NUPL2O15504 423 aaKnown RBP9.56□□□□□ -0.88
COL4A5-206ENST00000489230 NXPH3O95157 252 aa9.56□□□□□ -0.88
COL4A5-206ENST00000489230 IFNA4P05014 189 aa9.56□□□□□ -0.88
COL4A5-206ENST00000489230 SLC25A4P12235 298 aa9.56□□□□□ -0.88
COL4A5-206ENST00000489230 NPY1RP25929 384 aa9.56□□□□□ -0.88
COL4A5-206ENST00000489230 GPX4P36969 197 aaPredicted RBP9.56□□□□□ -0.88
COL4A5-206ENST00000489230 Q56UQ5 140 aa9.56□□□□□ -0.88
COL4A5-206ENST00000489230 C9orf66Q5T8R8 295 aa9.56□□□□□ -0.88
COL4A5-206ENST00000489230 ZBTB8BQ8NAP8 495 aaPredicted RBP9.56□□□□□ -0.88
COL4A5-206ENST00000489230 OR4D5Q8NGN0 318 aa9.56□□□□□ -0.88
COL4A5-206ENST00000489230 PINX1Q96BK5 328 aaKnown RBP9.56□□□□□ -0.88
COL4A5-206ENST00000489230 OR10C1Q96KK4 312 aa9.56□□□□□ -0.88
COL4A5-206ENST00000489230 C2orf50Q96LR7 162 aa9.56□□□□□ -0.88
COL4A5-206ENST00000489230 OR4C12Q96R67 309 aa9.56□□□□□ -0.88
COL4A5-206ENST00000489230 RAB40CQ96S21 281 aa9.56□□□□□ -0.88
COL4A5-206ENST00000489230 LGALS9O00182 355 aa9.55□□□□□ -0.88
COL4A5-206ENST00000489230 BMPR1BO00238 502 aa9.55□□□□□ -0.88
COL4A5-206ENST00000489230 SSNA1O43805 119 aa9.55□□□□□ -0.88
COL4A5-206ENST00000489230 OR2C1O95371 312 aa9.55□□□□□ -0.88
COL4A5-206ENST00000489230 IGHV3-23P01764 117 aa9.55□□□□□ -0.88
COL4A5-206ENST00000489230 IGLL1P15814 213 aa9.55□□□□□ -0.88
COL4A5-206ENST00000489230 OPRK1P41145 380 aa9.55□□□□□ -0.88
COL4A5-206ENST00000489230 SLURP1P55000 103 aa9.55□□□□□ -0.88
COL4A5-206ENST00000489230 TAS2R30P59541 319 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms