RNA–Protein interactions for RNA: ENST00000487984.1

SDC3-204, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 355 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-204ENST00000487984 TM4SF20Q53R12 229 aa9.24□□□□□ -0.93
SDC3-204ENST00000487984 TMEM61Q8N0U2 210 aa9.24□□□□□ -0.93
SDC3-204ENST00000487984 UXS1Q8NBZ7 420 aa9.24□□□□□ -0.93
SDC3-204ENST00000487984 HIPK2Q9H2X6 1198 aa9.24□□□□□ -0.93
SDC3-204ENST00000487984 SRD5A3Q9H8P0 318 aa9.24□□□□□ -0.93
SDC3-204ENST00000487984 GAR1Q9NY12 217 aaKnown RBP9.24□□□□□ -0.93
SDC3-204ENST00000487984 IGHV3-35A0A0C4DH35 117 aa9.23□□□□□ -0.93
SDC3-204ENST00000487984 SNRPGP15A8MWD9 76 aa9.23□□□□□ -0.93
SDC3-204ENST00000487984 GPR31O00270 319 aa9.23□□□□□ -0.93
SDC3-204ENST00000487984 KRASP01116 189 aa9.23□□□□□ -0.93
SDC3-204ENST00000487984 TRAPPC2P0DI81 140 aa9.23□□□□□ -0.93
SDC3-204ENST00000487984 TRAPPC2BP0DI82 140 aa9.23□□□□□ -0.93
SDC3-204ENST00000487984 OR13C7P0DN81 318 aa9.23□□□□□ -0.93
SDC3-204ENST00000487984 ANXA3P12429 323 aa9.23□□□□□ -0.93
SDC3-204ENST00000487984 LPAR6P43657 344 aa9.23□□□□□ -0.93
SDC3-204ENST00000487984 C4orf46Q504U0 113 aa9.23□□□□□ -0.93
SDC3-204ENST00000487984 ZNF585BQ52M93 769 aa9.23□□□□□ -0.93
SDC3-204ENST00000487984 TMEM128Q5BJH2 165 aa9.23□□□□□ -0.93
SDC3-204ENST00000487984 THOC7Q6I9Y2 204 aaKnown RBP9.23□□□□□ -0.93
SDC3-204ENST00000487984 BTNL8Q6UX41 500 aa9.23□□□□□ -0.93
SDC3-204ENST00000487984 OR1L8Q8NGR8 309 aa9.23□□□□□ -0.93
SDC3-204ENST00000487984 FAM110AQ9BQ89 295 aa9.23□□□□□ -0.93
SDC3-204ENST00000487984 NDUFA4L2Q9NRX3 87 aa9.23□□□□□ -0.93
SDC3-204ENST00000487984 THYN1Q9P016 225 aa9.23□□□□□ -0.93
SDC3-204ENST00000487984 FLVCR2Q9UPI3 526 aa9.23□□□□□ -0.93
SDC3-204ENST00000487984 KCNIP3Q9Y2W7 256 aa9.23□□□□□ -0.93
SDC3-204ENST00000487984 NSG2Q9Y328 171 aa9.23□□□□□ -0.93
SDC3-204ENST00000487984 SACSQ9NZJ4 4579 aa9.23□□□□□ -0.93
SDC3-204ENST00000487984 TEX13DA0A0J9YY54 714 aaPredicted RBP9.22□□□□□ -0.93
SDC3-204ENST00000487984 B3GALNT1O75752 331 aa9.22□□□□□ -0.93
SDC3-204ENST00000487984 SCAF4O95104 1147 aaKnown RBP9.22□□□□□ -0.93
SDC3-204ENST00000487984 SERPINE2P07093 398 aa9.22□□□□□ -0.93
SDC3-204ENST00000487984 OR4E1P0C645 316 aa9.22□□□□□ -0.93
SDC3-204ENST00000487984 AKR1C4P17516 323 aa9.22□□□□□ -0.93
SDC3-204ENST00000487984 ANXA7P20073 488 aaKnown RBP9.22□□□□□ -0.93
SDC3-204ENST00000487984 G6PCP35575 357 aa9.22□□□□□ -0.93
SDC3-204ENST00000487984 MFAP2P55001 183 aa9.22□□□□□ -0.93
SDC3-204ENST00000487984 RND3P61587 244 aa9.22□□□□□ -0.93
SDC3-204ENST00000487984 PHLDA2Q53GA4 152 aa9.22□□□□□ -0.93
SDC3-204ENST00000487984 SLC16A13Q7RTY0 426 aa9.22□□□□□ -0.93
SDC3-204ENST00000487984 HSD17B13Q7Z5P4 300 aaPredicted RBP9.22□□□□□ -0.93
SDC3-204ENST00000487984 CADM3Q8N126 398 aa9.22□□□□□ -0.93
SDC3-204ENST00000487984 VN1R17PQ8TDU5 208 aa9.22□□□□□ -0.93
SDC3-204ENST00000487984 LSM10Q969L4 123 aaKnown RBP9.22□□□□□ -0.93
SDC3-204ENST00000487984 HINT2Q9BX68 163 aa9.22□□□□□ -0.93
SDC3-204ENST00000487984 ZNF436Q9C0F3 470 aaPredicted RBP9.22□□□□□ -0.93
SDC3-204ENST00000487984 OR51B2Q9Y5P1 312 aa9.22□□□□□ -0.93
SDC3-204ENST00000487984 IGHV3-21A0A0B4J1V1 117 aa9.21□□□□□ -0.94
SDC3-204ENST00000487984 LCE6AA0A183 80 aa9.21□□□□□ -0.94
SDC3-204ENST00000487984 C7orf66A4D0T2 115 aa9.21□□□□□ -0.94
SDC3-204ENST00000487984 OR2T8A6NH00 312 aa9.21□□□□□ -0.94
SDC3-204ENST00000487984 CYB5BO43169 146 aa9.21□□□□□ -0.94
SDC3-204ENST00000487984 TGOLN2O43493 480 aa9.21□□□□□ -0.94
SDC3-204ENST00000487984 C8orf88P0DMB2 117 aa9.21□□□□□ -0.94
SDC3-204ENST00000487984 VAMP1P23763 118 aa9.21□□□□□ -0.94
SDC3-204ENST00000487984 PIGPP57054 158 aa9.21□□□□□ -0.94
SDC3-204ENST00000487984 SLC25A24Q6NUK1 477 aa9.21□□□□□ -0.94
SDC3-204ENST00000487984 OR52B4Q8NGK2 314 aa9.21□□□□□ -0.94
SDC3-204ENST00000487984 ZNF431Q8TF32 576 aaPredicted RBP9.21□□□□□ -0.94
SDC3-204ENST00000487984 MARC2Q969Z3 335 aa9.21□□□□□ -0.94
SDC3-204ENST00000487984 MRGPRFQ96AM1 343 aa9.21□□□□□ -0.94
SDC3-204ENST00000487984 RTBDNQ9BSG5 229 aaPredicted RBP9.21□□□□□ -0.94
SDC3-204ENST00000487984 C5orf66Q9H5L9 145 aa9.21□□□□□ -0.94
SDC3-204ENST00000487984 UFC1Q9Y3C8 167 aa9.21□□□□□ -0.94
SDC3-204ENST00000487984 F11RQ9Y624 299 aaKnown RBP9.21□□□□□ -0.94
SDC3-204ENST00000487984 hCG_2014768A0A024R1R8 64 aa9.2□□□□□ -0.94
SDC3-204ENST00000487984 DBX1A6NMT0 343 aa9.2□□□□□ -0.94
SDC3-204ENST00000487984 SSNA1O43805 119 aa9.2□□□□□ -0.94
SDC3-204ENST00000487984 SNAPC5O75971 98 aa9.2□□□□□ -0.94
SDC3-204ENST00000487984 ELLP55199 621 aaPredicted RBP9.2□□□□□ -0.94
SDC3-204ENST00000487984 SRPXP78539 464 aa9.2□□□□□ -0.94
SDC3-204ENST00000487984 DHODHQ02127 395 aa9.2□□□□□ -0.94
SDC3-204ENST00000487984 LYG2Q86SG7 212 aa9.2□□□□□ -0.94
SDC3-204ENST00000487984 TBC1D26Q86UD7 250 aa9.2□□□□□ -0.94
SDC3-204ENST00000487984 COQ8AQ8NI60 647 aa9.2□□□□□ -0.94
SDC3-204ENST00000487984 TMEM190Q8WZ59 177 aa9.2□□□□□ -0.94
SDC3-204ENST00000487984 BSCL2Q96G97 398 aaPredicted RBP9.2□□□□□ -0.94
SDC3-204ENST00000487984 MED28Q9H204 178 aa9.2□□□□□ -0.94
SDC3-204ENST00000487984 TMEM14BQ9NUH8 114 aa9.2□□□□□ -0.94
SDC3-204ENST00000487984 MRPL27Q9P0M9 148 aaKnown RBP9.2□□□□□ -0.94
SDC3-204ENST00000487984 PRNDQ9UKY0 176 aa9.2□□□□□ -0.94
SDC3-204ENST00000487984 ALG5Q9Y673 324 aa9.2□□□□□ -0.94
SDC3-204ENST00000487984 TRAV25A0A0B4J276 109 aa9.19□□□□□ -0.94
SDC3-204ENST00000487984 CRYM-AS1A6NIL9 109 aa9.19□□□□□ -0.94
SDC3-204ENST00000487984 C15orf61A6NNL5 157 aa9.19□□□□□ -0.94
SDC3-204ENST00000487984 F8W735 103 aaPredicted RBP9.19□□□□□ -0.94
SDC3-204ENST00000487984 K7EIM0 57 aa9.19□□□□□ -0.94
SDC3-204ENST00000487984 SFT2D2O95562 160 aa9.19□□□□□ -0.94
SDC3-204ENST00000487984 PI3P19957 117 aa9.19□□□□□ -0.94
SDC3-204ENST00000487984 BCAP31P51572 246 aa9.19□□□□□ -0.94
SDC3-204ENST00000487984 DHRS2Q13268 280 aa9.19□□□□□ -0.94
SDC3-204ENST00000487984 ANKRD55Q3KP44 614 aa9.19□□□□□ -0.94
SDC3-204ENST00000487984 RBPMS2Q6ZRY4 209 aaKnown RBP9.19□□□□□ -0.94
SDC3-204ENST00000487984 OR5B3Q8NH48 314 aa9.19□□□□□ -0.94
SDC3-204ENST00000487984 SCARB1Q8WTV0 552 aa9.19□□□□□ -0.94
SDC3-204ENST00000487984 CHRDL1Q9BU40 450 aa9.19□□□□□ -0.94
SDC3-204ENST00000487984 NAA60Q9H7X0 242 aa9.19□□□□□ -0.94
SDC3-204ENST00000487984 FAM212BQ9NTI7 297 aaPredicted RBP9.19□□□□□ -0.94
SDC3-204ENST00000487984 FKBP11Q9NYL4 201 aa9.19□□□□□ -0.94
SDC3-204ENST00000487984 C21orf62Q9NYP8 219 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms