RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 TGOLN2O43493 480 aa0.52□□□□□ -2.33
CCDC66-221ENST00000487739 TNNC2P02585 160 aa0.52□□□□□ -2.33
CCDC66-221ENST00000487739 CALB1P05937 261 aa0.52□□□□□ -2.33
CCDC66-221ENST00000487739 CTSDP07339 412 aaPredicted RBP0.52□□□□□ -2.33
CCDC66-221ENST00000487739 ASAH2BP0C7U1 165 aa0.52□□□□□ -2.33
CCDC66-221ENST00000487739 ZNF93P35789 620 aaPredicted RBP0.52□□□□□ -2.33
CCDC66-221ENST00000487739 HBA1P69905 142 aa0.52□□□□□ -2.33
CCDC66-221ENST00000487739 IFITM2Q01629 132 aa0.52□□□□□ -2.33
CCDC66-221ENST00000487739 HIST2H3PS2Q5TEC6 136 aa0.52□□□□□ -2.33
CCDC66-221ENST00000487739 C8orf74Q6P047 294 aa0.52□□□□□ -2.33
CCDC66-221ENST00000487739 RPL22L1Q6P5R6 122 aaKnown RBP0.52□□□□□ -2.33
CCDC66-221ENST00000487739 TMEM86BQ8N661 226 aa0.52□□□□□ -2.33
CCDC66-221ENST00000487739 MCFD2Q8NI22 146 aa0.52□□□□□ -2.33
CCDC66-221ENST00000487739 SLC35B4Q969S0 331 aa0.52□□□□□ -2.33
CCDC66-221ENST00000487739 PTH2Q96A98 100 aa0.52□□□□□ -2.33
CCDC66-221ENST00000487739 GINS4Q9BRT9 223 aa0.52□□□□□ -2.33
CCDC66-221ENST00000487739 C11orf68Q9H3H3 251 aaKnown RBP0.52□□□□□ -2.33
CCDC66-221ENST00000487739 CKLFQ9UBR5 152 aa0.52□□□□□ -2.33
CCDC66-221ENST00000487739 PKIGQ9Y2B9 76 aa0.52□□□□□ -2.33
CCDC66-221ENST00000487739 LSM5Q9Y4Y9 91 aaKnown RBP0.52□□□□□ -2.33
CCDC66-221ENST00000487739 C9orf84Q5VXU9 1444 aa0.52□□□□□ -2.33
CCDC66-221ENST00000487739 MCM3APO60318 1980 aa0.52□□□□□ -2.33
CCDC66-221ENST00000487739 TRAV1-1A0A0B4J248 108 aa0.51□□□□□ -2.33
CCDC66-221ENST00000487739 FUOMA2VDF0 154 aa0.51□□□□□ -2.33
CCDC66-221ENST00000487739 C2orf70A6NJV1 201 aa0.51□□□□□ -2.33
CCDC66-221ENST00000487739 C19orf84I3L1E1 186 aa0.51□□□□□ -2.33
CCDC66-221ENST00000487739 HTR1AP08908 422 aa0.51□□□□□ -2.33
CCDC66-221ENST00000487739 OR5G3P0C626 314 aa0.51□□□□□ -2.33
CCDC66-221ENST00000487739 BRS3P32247 399 aa0.51□□□□□ -2.33
CCDC66-221ENST00000487739 DEFA1P59665 94 aa0.51□□□□□ -2.33
CCDC66-221ENST00000487739 C1orf158Q8N1D5 194 aa0.51□□□□□ -2.33
CCDC66-221ENST00000487739 LINC00471Q8N535 108 aa0.51□□□□□ -2.33
CCDC66-221ENST00000487739 LINC00311Q8N616 119 aa0.51□□□□□ -2.33
CCDC66-221ENST00000487739 DNAJC9Q8WXX5 260 aa0.51□□□□□ -2.33
CCDC66-221ENST00000487739 OPTNQ96CV9 577 aa0.51□□□□□ -2.33
CCDC66-221ENST00000487739 IMP4Q96G21 291 aaKnown RBP0.51□□□□□ -2.33
CCDC66-221ENST00000487739 SCGB3A1Q96QR1 104 aa0.51□□□□□ -2.33
CCDC66-221ENST00000487739 SCN3AQ9NY46 2000 aa0.5□□□□□ -2.33
CCDC66-221ENST00000487739 DENND4CQ5VZ89 1909 aa0.5□□□□□ -2.33
CCDC66-221ENST00000487739 A0A087WX48 190 aa0.5□□□□□ -2.33
CCDC66-221ENST00000487739 KCNK1O00180 336 aa0.5□□□□□ -2.33
CCDC66-221ENST00000487739 DCTN3O75935 186 aa0.5□□□□□ -2.33
CCDC66-221ENST00000487739 KCNJ8Q15842 424 aa0.5□□□□□ -2.33
CCDC66-221ENST00000487739 SPANXN3Q5MJ09 141 aa0.5□□□□□ -2.33
CCDC66-221ENST00000487739 LRRC25Q8N386 305 aaPredicted RBP0.5□□□□□ -2.33
CCDC66-221ENST00000487739 PPP1R2P1Q96PQ5 205 aa0.5□□□□□ -2.33
CCDC66-221ENST00000487739 FBXL12Q9NXK8 326 aa0.5□□□□□ -2.33
CCDC66-221ENST00000487739 SNAPC4Q5SXM2 1469 aa0.49□□□□□ -2.33
CCDC66-221ENST00000487739 WRNQ14191 1432 aaPredicted RBP eCLIP0.49□□□□□ -2.33
CCDC66-221ENST00000487739 CASP8AP2Q9UKL3 1982 aa0.49□□□□□ -2.33
CCDC66-221ENST00000487739 PSMD12O00232 456 aaPredicted RBP0.49□□□□□ -2.33
CCDC66-221ENST00000487739 FAAHO00519 579 aa0.49□□□□□ -2.33
CCDC66-221ENST00000487739 HLA-DRB1P01911 266 aa0.49□□□□□ -2.33
CCDC66-221ENST00000487739 HIST1H1EP10412 219 aaKnown RBP0.49□□□□□ -2.33
CCDC66-221ENST00000487739 RPS20P60866 119 aaKnown RBP0.49□□□□□ -2.33
CCDC66-221ENST00000487739 SPCS3P61009 180 aa0.49□□□□□ -2.33
CCDC66-221ENST00000487739 SNRPD2P62316 118 aaKnown RBP0.49□□□□□ -2.33
CCDC66-221ENST00000487739 KHDC3LQ587J8 217 aa0.49□□□□□ -2.33
CCDC66-221ENST00000487739 DEFB128Q7Z7B8 93 aa0.49□□□□□ -2.33
CCDC66-221ENST00000487739 OOSP2Q86WS3 158 aa0.49□□□□□ -2.33
CCDC66-221ENST00000487739 OR4E2Q8NGC2 313 aa0.49□□□□□ -2.33
CCDC66-221ENST00000487739 OR4D11Q8NGI4 311 aa0.49□□□□□ -2.33
CCDC66-221ENST00000487739 OR5A1Q8NGJ0 315 aa0.49□□□□□ -2.33
CCDC66-221ENST00000487739 OR13C4Q8NGS5 318 aa0.49□□□□□ -2.33
CCDC66-221ENST00000487739 TERB2Q8NHR7 220 aa0.49□□□□□ -2.33
CCDC66-221ENST00000487739 H1FXQ92522 213 aaKnown RBP0.49□□□□□ -2.33
CCDC66-221ENST00000487739 MRPL57Q9BQC6 102 aaKnown RBP0.49□□□□□ -2.33
CCDC66-221ENST00000487739 TMEM147Q9BVK8 224 aa0.49□□□□□ -2.33
CCDC66-221ENST00000487739 MRPS26Q9BYN8 205 aaKnown RBP0.49□□□□□ -2.33
CCDC66-221ENST00000487739 PRTFDC1Q9NRG1 225 aa0.49□□□□□ -2.33
CCDC66-221ENST00000487739 GUCA1BQ9UMX6 200 aa0.49□□□□□ -2.33
CCDC66-221ENST00000487739 ZFP30Q9Y2G7 519 aa0.49□□□□□ -2.33
CCDC66-221ENST00000487739 DOCK3Q8IZD9 2030 aa0.48□□□□□ -2.33
CCDC66-221ENST00000487739 MYH7BA7E2Y1 1941 aa0.48□□□□□ -2.33
CCDC66-221ENST00000487739 MTUS2Q5JR59 1369 aa0.48□□□□□ -2.33
CCDC66-221ENST00000487739 MAP3K5Q99683 1374 aa0.48□□□□□ -2.33
CCDC66-221ENST00000487739 TAF1LQ8IZX4 1826 aa0.48□□□□□ -2.33
CCDC66-221ENST00000487739 LOC110117498A0A087WWA1 95 aa0.48□□□□□ -2.33
CCDC66-221ENST00000487739 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.48□□□□□ -2.33
CCDC66-221ENST00000487739 PQLC2LA1A4F0 135 aa0.48□□□□□ -2.33
CCDC66-221ENST00000487739 DPRXA6NFQ7 191 aa0.48□□□□□ -2.33
CCDC66-221ENST00000487739 BUB1B-PAK6H3BSN5 160 aa0.48□□□□□ -2.33
CCDC66-221ENST00000487739 OR2T1O43869 369 aa0.48□□□□□ -2.33
CCDC66-221ENST00000487739 OR1I1O60431 355 aa0.48□□□□□ -2.33
CCDC66-221ENST00000487739 HIST1H1TP22492 207 aaPredicted RBP0.48□□□□□ -2.33
CCDC66-221ENST00000487739 SSR2P43308 183 aa0.48□□□□□ -2.33
CCDC66-221ENST00000487739 RPL5P46777 297 aaKnown RBP0.48□□□□□ -2.33
CCDC66-221ENST00000487739 OR2F1Q13607 317 aa0.48□□□□□ -2.33
CCDC66-221ENST00000487739 RNASE10Q5GAN6 216 aaKnown RBP0.48□□□□□ -2.33
CCDC66-221ENST00000487739 DPPA3Q6W0C5 159 aa0.48□□□□□ -2.33
CCDC66-221ENST00000487739 MIR17HGQ75NE6 70 aa0.48□□□□□ -2.33
CCDC66-221ENST00000487739 PHF13Q86YI8 300 aaPredicted RBP0.48□□□□□ -2.33
CCDC66-221ENST00000487739 ANKRD29Q8N6D5 301 aa0.48□□□□□ -2.33
CCDC66-221ENST00000487739 SIGLECL1Q8N7X8 197 aa0.48□□□□□ -2.33
CCDC66-221ENST00000487739 OR52R1Q8NGF1 315 aa0.48□□□□□ -2.33
CCDC66-221ENST00000487739 NIPSNAP1Q9BPW8 284 aa0.48□□□□□ -2.33
CCDC66-221ENST00000487739 KLK9Q9UKQ9 250 aa0.48□□□□□ -2.33
CCDC66-221ENST00000487739 ERGIC3Q9Y282 383 aa0.48□□□□□ -2.33
CCDC66-221ENST00000487739 ZFC3H1O60293 1989 aaKnown RBP0.48□□□□□ -2.33
CCDC66-221ENST00000487739 RIC1Q4ADV7 1423 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms