RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 SSX7Q7RTT5 188 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 SLC16A13Q7RTY0 426 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 TMEM144Q7Z5S9 345 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 RPP25LQ8N5L8 163 aaKnown RBP7.49□□□□□ -1.21
SF3B1-211ENST00000487698 ZNF709Q8N972 641 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 Q8N9W7 124 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 LFNGQ8NES3 379 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 OR1P1Q8NH06 330 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 MBD3L1Q8WWY6 194 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 LINC00052Q96N35 136 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 FAM210AQ96ND0 272 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 MEGF9Q9H1U4 602 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 DMRT1Q9Y5R6 373 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 CSMD1Q96PZ7 3565 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 ITPR2Q14571 2701 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 BTBD17A6NE02 478 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 KRBOX1C9JBD0 128 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 J3QLI3 93 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 AGPAT2O15120 278 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 MBP02144 154 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 IGHV4-31P0DP07 118 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 NDPQ00604 133 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 FXYD3Q14802 87 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 MLANAQ16655 118 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 FFAR4Q5NUL3 377 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 ZNF562Q6V9R5 426 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 C19orf35Q6ZS72 473 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 PIFOQ8TCI5 191 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 SSMEM1Q8WWF3 244 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 KCNIP2Q9NS61 270 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 F11RQ9Y624 299 aaKnown RBP7.49□□□□□ -1.21
SF3B1-211ENST00000487698 CCDC168Q8NDH2 2452 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 NCBP2LA6PVI3 153 aaKnown RBP7.48□□□□□ -1.21
SF3B1-211ENST00000487698 YIF1AO95070 293 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 CNIH1O95406 144 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 HLA-DRB1P01911 266 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 CD5P06127 495 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 CRYGCP07315 174 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 APELAP0DMC3 54 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 CX3CL1P78423 397 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 CCL20P78556 96 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 TMEM249Q2WGJ8 235 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 MAPK1IP1LQ8NDC0 245 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 BPIFCQ8NFQ6 507 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 Q96MF0 132 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 C1RLQ9NZP8 487 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 CORTO00230 105 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 HBE1P02100 147 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 CTRB1P17538 263 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 M6PRP20645 277 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 RPL29P47914 159 aaKnown RBP7.48□□□□□ -1.21
SF3B1-211ENST00000487698 PRR20EP86478 221 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 PRR20CP86479 221 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 PRR20DP86480 221 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 PRR20BP86481 221 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 PRR20AP86496 221 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 MIC13Q5XKP0 118 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 CTRB2Q6GPI1 263 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 SFT2D1Q8WV19 159 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 ARPC1AQ92747 370 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 SLC35E1Q96K37 410 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 FAM96BQ9Y3D0 163 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 PXMP4Q9Y6I8 212 aa7.48□□□□□ -1.21
SF3B1-211ENST00000487698 FASNP49327 2511 aaKnown RBP7.47□□□□□ -1.21
SF3B1-211ENST00000487698 IGHV7-81A0A0B4J1V7 117 aa7.47□□□□□ -1.21
SF3B1-211ENST00000487698 CTXND1A0A1B0GTU2 59 aa7.47□□□□□ -1.21
SF3B1-211ENST00000487698 A0A1B0GV50 99 aa7.47□□□□□ -1.21
SF3B1-211ENST00000487698 SEC14L6B5MCN3 397 aa7.47□□□□□ -1.21
SF3B1-211ENST00000487698 TGFAP01135 160 aa7.47□□□□□ -1.21
SF3B1-211ENST00000487698 RAB31Q13636 194 aa7.47□□□□□ -1.21
SF3B1-211ENST00000487698 ACOT6Q3I5F7 207 aaPredicted RBP7.47□□□□□ -1.21
SF3B1-211ENST00000487698 GCSAMLQ5JQS6 135 aa7.47□□□□□ -1.21
SF3B1-211ENST00000487698 ASPHD1Q5U4P2 390 aa7.47□□□□□ -1.21
SF3B1-211ENST00000487698 STPG3Q8N7X2 389 aa7.47□□□□□ -1.21
SF3B1-211ENST00000487698 OR10G4Q8NGN3 311 aa7.47□□□□□ -1.21
SF3B1-211ENST00000487698 OR10G9Q8NGN4 311 aa7.47□□□□□ -1.21
SF3B1-211ENST00000487698 OR10G7Q8NGN6 311 aa7.47□□□□□ -1.21
SF3B1-211ENST00000487698 OR2T6Q8NHC8 308 aa7.47□□□□□ -1.21
SF3B1-211ENST00000487698 ABHD5Q8WTS1 349 aa7.47□□□□□ -1.21
SF3B1-211ENST00000487698 FAM103A1Q9BTL3 118 aaKnown RBP7.47□□□□□ -1.21
SF3B1-211ENST00000487698 TMEM231Q9H6L2 316 aa7.47□□□□□ -1.21
SF3B1-211ENST00000487698 MRPL36Q9P0J6 103 aaKnown RBP7.47□□□□□ -1.21
SF3B1-211ENST00000487698 SLC45A2Q9UMX9 530 aa7.47□□□□□ -1.21
SF3B1-211ENST00000487698 TMEM218A2RU14 115 aa7.46□□□□□ -1.21
SF3B1-211ENST00000487698 MAP1LC3B2A6NCE7 125 aa7.46□□□□□ -1.21
SF3B1-211ENST00000487698 NPIPB5A8MRT5 1133 aa7.46□□□□□ -1.21
SF3B1-211ENST00000487698 FSHBP01225 129 aa7.46□□□□□ -1.21
SF3B1-211ENST00000487698 LINC00869P0C866 280 aa7.46□□□□□ -1.21
SF3B1-211ENST00000487698 EGR2P11161 476 aaPredicted RBP7.46□□□□□ -1.21
SF3B1-211ENST00000487698 B2MP61769 119 aa7.46□□□□□ -1.21
SF3B1-211ENST00000487698 GUK1Q16774 197 aa7.46□□□□□ -1.21
SF3B1-211ENST00000487698 THAP8Q8NA92 274 aa7.46□□□□□ -1.21
SF3B1-211ENST00000487698 MAP1LC3BQ9GZQ8 125 aa7.46□□□□□ -1.21
SF3B1-211ENST00000487698 SLC25A22Q9H936 323 aa7.46□□□□□ -1.21
SF3B1-211ENST00000487698 SLC39A9Q9NUM3 307 aa7.46□□□□□ -1.21
SF3B1-211ENST00000487698 SOX21Q9Y651 276 aaPredicted RBP7.46□□□□□ -1.21
SF3B1-211ENST00000487698 IGKV1D-37A0A075B6S9 117 aa7.46□□□□□ -1.22
SF3B1-211ENST00000487698 C9JQL5 133 aa7.46□□□□□ -1.22
SF3B1-211ENST00000487698 FBP1P09467 338 aa7.46□□□□□ -1.22
SF3B1-211ENST00000487698 DEFA4P12838 97 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms