RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 IFI27L2Q9H2X8 130 aa12.73□□□□□ -0.37
HLA-DQB1-209ENST00000487676 TNFRSF19Q9NS68 423 aa12.73□□□□□ -0.37
HLA-DQB1-209ENST00000487676 V9GYV3 84 aa12.73□□□□□ -0.37
HLA-DQB1-209ENST00000487676 SAA2-SAA4A0A096LPE2 208 aa12.72□□□□□ -0.37
HLA-DQB1-209ENST00000487676 ZNF716A6NP11 495 aa12.72□□□□□ -0.37
HLA-DQB1-209ENST00000487676 ACP1P24666 158 aa12.72□□□□□ -0.37
HLA-DQB1-209ENST00000487676 CKS2P33552 79 aa12.72□□□□□ -0.37
HLA-DQB1-209ENST00000487676 NTF4P34130 210 aa12.72□□□□□ -0.37
HLA-DQB1-209ENST00000487676 MAGEA5P43359 124 aa12.72□□□□□ -0.37
HLA-DQB1-209ENST00000487676 LOXL2Q9Y4K0 774 aa12.72□□□□□ -0.37
HLA-DQB1-209ENST00000487676 SSPNQ14714 243 aa12.72□□□□□ -0.37
HLA-DQB1-209ENST00000487676 C3AR1Q16581 482 aa12.72□□□□□ -0.37
HLA-DQB1-209ENST00000487676 INO80CQ6PI98 192 aaPredicted RBP12.72□□□□□ -0.37
HLA-DQB1-209ENST00000487676 OR13A1Q8NGR1 328 aa12.72□□□□□ -0.37
HLA-DQB1-209ENST00000487676 SLC25A33Q9BSK2 321 aa12.72□□□□□ -0.37
HLA-DQB1-209ENST00000487676 OR2J3O76001 311 aa12.72□□□□□ -0.37
HLA-DQB1-209ENST00000487676 TMEM249Q2WGJ8 235 aa12.72□□□□□ -0.37
HLA-DQB1-209ENST00000487676 GCSAMQ8N6F7 178 aa12.72□□□□□ -0.37
HLA-DQB1-209ENST00000487676 CACNA1GO43497 2377 aa12.72□□□□□ -0.37
HLA-DQB1-209ENST00000487676 DNAJC13O75165 2243 aa12.72□□□□□ -0.37
HLA-DQB1-209ENST00000487676 TMSB15BA0A087X1C1 80 aa12.71□□□□□ -0.37
HLA-DQB1-209ENST00000487676 A0A1W2PR77 199 aa12.71□□□□□ -0.37
HLA-DQB1-209ENST00000487676 FOXH1O75593 365 aa12.71□□□□□ -0.37
HLA-DQB1-209ENST00000487676 KLF7O75840 302 aaPredicted RBP12.71□□□□□ -0.37
HLA-DQB1-209ENST00000487676 OR9G4Q8NGQ1 327 aa12.71□□□□□ -0.37
HLA-DQB1-209ENST00000487676 SNRNP40Q96DI7 357 aaKnown RBP12.71□□□□□ -0.37
HLA-DQB1-209ENST00000487676 CSTL1Q9H114 145 aa12.71□□□□□ -0.37
HLA-DQB1-209ENST00000487676 CALYQ9NYX4 217 aa12.71□□□□□ -0.37
HLA-DQB1-209ENST00000487676 WNT9BO14905 357 aa12.71□□□□□ -0.37
HLA-DQB1-209ENST00000487676 TM4SF20Q53R12 229 aa12.71□□□□□ -0.37
HLA-DQB1-209ENST00000487676 NUP35Q8NFH5 326 aa12.71□□□□□ -0.37
HLA-DQB1-209ENST00000487676 RCHY1Q96PM5 261 aa12.71□□□□□ -0.37
HLA-DQB1-209ENST00000487676 SLC25A17O43808 307 aa12.71□□□□□ -0.38
HLA-DQB1-209ENST00000487676 NPIPB3Q92617 1050 aa12.71□□□□□ -0.38
HLA-DQB1-209ENST00000487676 HIGD1AQ9Y241 93 aa12.71□□□□□ -0.38
HLA-DQB1-209ENST00000487676 SELENOKQ9Y6D0 94 aa12.71□□□□□ -0.38
HLA-DQB1-209ENST00000487676 FRMPD3Q5JV73 1810 aa12.71□□□□□ -0.38
HLA-DQB1-209ENST00000487676 KIF26AQ9ULI4 1882 aaPredicted RBP12.71□□□□□ -0.38
HLA-DQB1-209ENST00000487676 OR2M7Q8NG81 312 aa12.71□□□□□ -0.38
HLA-DQB1-209ENST00000487676 MYOZ3Q8TDC0 251 aa12.71□□□□□ -0.38
HLA-DQB1-209ENST00000487676 HS3ST6Q96QI5 342 aa12.71□□□□□ -0.38
HLA-DQB1-209ENST00000487676 NAA38Q9BRA0 125 aaKnown RBP12.71□□□□□ -0.38
HLA-DQB1-209ENST00000487676 NBEAP1P0C6P0 100 aa12.7□□□□□ -0.38
HLA-DQB1-209ENST00000487676 SCGB1D4Q6XE38 83 aa12.7□□□□□ -0.38
HLA-DQB1-209ENST00000487676 RND1Q92730 232 aa12.7□□□□□ -0.38
HLA-DQB1-209ENST00000487676 CFHR5Q9BXR6 569 aa12.7□□□□□ -0.38
HLA-DQB1-209ENST00000487676 DUTP33316 252 aaKnown RBP12.7□□□□□ -0.38
HLA-DQB1-209ENST00000487676 MEOX1P50221 254 aa12.7□□□□□ -0.38
HLA-DQB1-209ENST00000487676 SLC25A45Q8N413 288 aa12.7□□□□□ -0.38
HLA-DQB1-209ENST00000487676 ZADH2Q8N4Q0 377 aa12.7□□□□□ -0.38
HLA-DQB1-209ENST00000487676 C15orf61A6NNL5 157 aa12.7□□□□□ -0.38
HLA-DQB1-209ENST00000487676 COX6A1P12074 109 aa12.7□□□□□ -0.38
HLA-DQB1-209ENST00000487676 NPPCP23582 126 aa12.7□□□□□ -0.38
HLA-DQB1-209ENST00000487676 CACNG8Q8WXS5 425 aa12.7□□□□□ -0.38
HLA-DQB1-209ENST00000487676 GTSF1LQ9H1H1 148 aa12.7□□□□□ -0.38
HLA-DQB1-209ENST00000487676 CCL4P13236 92 aa12.69□□□□□ -0.38
HLA-DQB1-209ENST00000487676 HIST1H4GQ99525 98 aa12.69□□□□□ -0.38
HLA-DQB1-209ENST00000487676 PROCRQ9UNN8 238 aa12.69□□□□□ -0.38
HLA-DQB1-209ENST00000487676 NCBP2LA6PVI3 153 aaKnown RBP12.69□□□□□ -0.38
HLA-DQB1-209ENST00000487676 SRSF9Q13242 221 aaKnown RBP eCLIP12.69□□□□□ -0.38
HLA-DQB1-209ENST00000487676 SAMD5Q5TGI4 173 aa12.69□□□□□ -0.38
HLA-DQB1-209ENST00000487676 LINC00305Q7Z4B0 112 aa12.69□□□□□ -0.38
HLA-DQB1-209ENST00000487676 TMEM189A5PLL7 270 aa12.69□□□□□ -0.38
HLA-DQB1-209ENST00000487676 FAM231BA6NCW3 169 aa12.69□□□□□ -0.38
HLA-DQB1-209ENST00000487676 TOMM40O96008 361 aa12.69□□□□□ -0.38
HLA-DQB1-209ENST00000487676 BVES-AS1Q5T3Y7 98 aa12.69□□□□□ -0.38
HLA-DQB1-209ENST00000487676 IGHV3OR15-7A0A075B7D8 119 aa12.69□□□□□ -0.38
HLA-DQB1-209ENST00000487676 A0A1B0GWB2 263 aa12.69□□□□□ -0.38
HLA-DQB1-209ENST00000487676 K7ESF4 209 aa12.69□□□□□ -0.38
HLA-DQB1-209ENST00000487676 M0R1B8 84 aa12.69□□□□□ -0.38
HLA-DQB1-209ENST00000487676 RBX1P62877 108 aa12.69□□□□□ -0.38
HLA-DQB1-209ENST00000487676 ACP7Q6ZNF0 438 aa12.69□□□□□ -0.38
HLA-DQB1-209ENST00000487676 MOGAT3Q86VF5 341 aa12.69□□□□□ -0.38
HLA-DQB1-209ENST00000487676 C11orf52Q96A22 123 aa12.69□□□□□ -0.38
HLA-DQB1-209ENST00000487676 LAMTOR5O43504 91 aa12.68□□□□□ -0.38
HLA-DQB1-209ENST00000487676 PPBPP02775 128 aa12.68□□□□□ -0.38
HLA-DQB1-209ENST00000487676 TMEM238LA0A1B0GVL6 79 aa12.68□□□□□ -0.38
HLA-DQB1-209ENST00000487676 A6NJY4 79 aa12.68□□□□□ -0.38
HLA-DQB1-209ENST00000487676 RFPL3SP0C7P2 107 aa12.68□□□□□ -0.38
HLA-DQB1-209ENST00000487676 DYNLRB1Q9NP97 96 aa12.68□□□□□ -0.38
HLA-DQB1-209ENST00000487676 A0A1B0GW15 77 aa12.68□□□□□ -0.38
HLA-DQB1-209ENST00000487676 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.68□□□□□ -0.38
HLA-DQB1-209ENST00000487676 FOXF2Q12947 444 aa12.68□□□□□ -0.38
HLA-DQB1-209ENST00000487676 FMC1Q96HJ9 113 aa12.68□□□□□ -0.38
HLA-DQB1-209ENST00000487676 PAX1P15863 534 aa12.68□□□□□ -0.38
HLA-DQB1-209ENST00000487676 KIR2DL2P43627 348 aaPredicted RBP12.68□□□□□ -0.38
HLA-DQB1-209ENST00000487676 KLF14Q8TD94 323 aaPredicted RBP12.68□□□□□ -0.38
HLA-DQB1-209ENST00000487676 NEUROG1Q92886 237 aa12.68□□□□□ -0.38
HLA-DQB1-209ENST00000487676 GFRA3O60609 400 aa12.67□□□□□ -0.38
HLA-DQB1-209ENST00000487676 OR1N2Q8NGR9 330 aa12.67□□□□□ -0.38
HLA-DQB1-209ENST00000487676 RASL11BQ9BPW5 248 aa12.67□□□□□ -0.38
HLA-DQB1-209ENST00000487676 EPDR1Q9UM22 224 aa12.67□□□□□ -0.38
HLA-DQB1-209ENST00000487676 FTH1P19P0C7X4 201 aa12.67□□□□□ -0.38
HLA-DQB1-209ENST00000487676 KIR3DS1Q14943 382 aa12.67□□□□□ -0.38
HLA-DQB1-209ENST00000487676 Q6P435 159 aa12.67□□□□□ -0.38
HLA-DQB1-209ENST00000487676 DEFB125Q8N687 156 aa12.67□□□□□ -0.38
HLA-DQB1-209ENST00000487676 DNASE2BQ8WZ79 361 aa12.67□□□□□ -0.38
HLA-DQB1-209ENST00000487676 LEAP2Q969E1 77 aa12.67□□□□□ -0.38
HLA-DQB1-209ENST00000487676 SARAFQ96BY9 339 aa12.67□□□□□ -0.38
HLA-DQB1-209ENST00000487676 PRELID3AQ96N28 172 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms