RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 SAA2-SAA4A0A096LPE2 208 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 HIST1H2BKO60814 126 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 TRGV3P03979 118 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 HIST1H2BJP06899 126 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 SAA2P0DJI9 122 aaPredicted RBP12.3□□□□□ -0.44
EPHB4-206ENST00000487222 HIST1H2BOP23527 126 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 HIST1H2BBP33778 126 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 HIST1H2BDP58876 126 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 HIST1H2BCP62807 126 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 HIST2H2BEQ16778 126 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.3□□□□□ -0.44
EPHB4-206ENST00000487222 HIST1H2BHQ93079 126 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 HIST1H2BNQ99877 126 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 HIST1H2BMQ99879 126 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 WFDC1Q9HC57 220 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 NRN1Q9NPD7 142 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 C17orf100A8MU93 164 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 ATXN7O15265 892 aaPredicted RBP12.3□□□□□ -0.44
EPHB4-206ENST00000487222 IGKV1D-33P01593 117 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 IGKV1-33P01594 117 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 MORN2Q502X0 79 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 NDUFAF3Q9BU61 184 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 DOCK4Q8N1I0 1966 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 C9orf172C9J069 976 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 OSTCQ9NRP0 149 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 WDR83OSQ9Y284 106 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 ORMDL3Q8N138 153 aa12.29□□□□□ -0.44
EPHB4-206ENST00000487222 TMEM105Q8N8V8 129 aa12.29□□□□□ -0.44
EPHB4-206ENST00000487222 C9orf106Q8NAJ2 232 aa12.29□□□□□ -0.44
EPHB4-206ENST00000487222 ARHGEF17Q96PE2 2063 aaPredicted RBP12.29□□□□□ -0.44
EPHB4-206ENST00000487222 A0A1W2PRE2 83 aa12.29□□□□□ -0.44
EPHB4-206ENST00000487222 NAPSAO96009 420 aa12.29□□□□□ -0.44
EPHB4-206ENST00000487222 CD55P08174 381 aa12.29□□□□□ -0.44
EPHB4-206ENST00000487222 ASIPP42127 132 aa12.29□□□□□ -0.44
EPHB4-206ENST00000487222 BSPH1Q075Z2 132 aa12.29□□□□□ -0.44
EPHB4-206ENST00000487222 SPTBN1Q01082 2364 aaKnown RBP12.29□□□□□ -0.44
EPHB4-206ENST00000487222 M0R381 172 aa12.29□□□□□ -0.44
EPHB4-206ENST00000487222 UBE2CO00762 179 aa12.29□□□□□ -0.44
EPHB4-206ENST00000487222 FAM57AQ8TBR7 257 aa12.29□□□□□ -0.44
EPHB4-206ENST00000487222 LDLRAD4O15165 306 aa12.29□□□□□ -0.44
EPHB4-206ENST00000487222 SRSF7Q16629 238 aaKnown RBP eCLIP12.29□□□□□ -0.44
EPHB4-206ENST00000487222 MEIG1Q5JSS6 88 aa12.29□□□□□ -0.44
EPHB4-206ENST00000487222 HEPN1Q6WQI6 88 aa12.29□□□□□ -0.44
EPHB4-206ENST00000487222 CHODLQ9H9P2 273 aa12.29□□□□□ -0.44
EPHB4-206ENST00000487222 OTORQ9NRC9 128 aa12.29□□□□□ -0.44
EPHB4-206ENST00000487222 S4R3C0 116 aa12.29□□□□□ -0.44
EPHB4-206ENST00000487222 RAMP3O60896 148 aa12.28□□□□□ -0.44
EPHB4-206ENST00000487222 CEACAM4O75871 244 aa12.28□□□□□ -0.44
EPHB4-206ENST00000487222 ZFP36L1Q07352 338 aaKnown RBP12.28□□□□□ -0.44
EPHB4-206ENST00000487222 ARPC1AQ92747 370 aa12.28□□□□□ -0.44
EPHB4-206ENST00000487222 RNASE7Q9H1E1 156 aaKnown RBP12.28□□□□□ -0.44
EPHB4-206ENST00000487222 MOB4Q9Y3A3 225 aa12.28□□□□□ -0.44
EPHB4-206ENST00000487222 FER1L6-AS1Q8NA97 138 aa12.28□□□□□ -0.44
EPHB4-206ENST00000487222 NEU4Q8WWR8 484 aaPredicted RBP12.28□□□□□ -0.44
EPHB4-206ENST00000487222 DUX5Q96PT3 197 aa12.28□□□□□ -0.44
EPHB4-206ENST00000487222 IGKV1-12A0A0C4DH73 117 aa12.28□□□□□ -0.44
EPHB4-206ENST00000487222 FAM90A9PA6NNJ1 464 aa12.28□□□□□ -0.44
EPHB4-206ENST00000487222 IGKV1D-12P01611 117 aa12.28□□□□□ -0.44
EPHB4-206ENST00000487222 SCGB1A1P11684 91 aa12.28□□□□□ -0.44
EPHB4-206ENST00000487222 TMEM170BQ5T4T1 132 aa12.28□□□□□ -0.44
EPHB4-206ENST00000487222 H7C1H1 209 aa12.28□□□□□ -0.44
EPHB4-206ENST00000487222 TCF23Q7RTU1 214 aa12.28□□□□□ -0.44
EPHB4-206ENST00000487222 TMEM242Q9NWH2 141 aa12.28□□□□□ -0.44
EPHB4-206ENST00000487222 RALGAPA1Q6GYQ0 2036 aa12.27□□□□□ -0.44
EPHB4-206ENST00000487222 IGHV3-23P01764 117 aa12.27□□□□□ -0.44
EPHB4-206ENST00000487222 PPP1R27Q86WC6 154 aa12.27□□□□□ -0.44
EPHB4-206ENST00000487222 DEPPQ9NTK1 212 aa12.27□□□□□ -0.44
EPHB4-206ENST00000487222 IGHV3-49A0A0A0MS15 119 aa12.27□□□□□ -0.45
EPHB4-206ENST00000487222 DUTP33316 252 aaKnown RBP12.27□□□□□ -0.45
EPHB4-206ENST00000487222 SUPT4H1P63272 117 aaKnown RBP12.27□□□□□ -0.45
EPHB4-206ENST00000487222 ST6GALNAC6Q969X2 333 aa12.27□□□□□ -0.45
EPHB4-206ENST00000487222 CYTL1Q9NRR1 136 aa12.27□□□□□ -0.45
EPHB4-206ENST00000487222 CCL3L1P16619 93 aa12.27□□□□□ -0.45
EPHB4-206ENST00000487222 GPR183P32249 361 aa12.27□□□□□ -0.45
EPHB4-206ENST00000487222 ADMP35318 185 aa12.27□□□□□ -0.45
EPHB4-206ENST00000487222 DMRTA1Q5VZB9 504 aa12.27□□□□□ -0.45
EPHB4-206ENST00000487222 ZIC4Q8N9L1 334 aa12.27□□□□□ -0.45
EPHB4-206ENST00000487222 TRBV24-1A0A075B6N3 115 aa12.27□□□□□ -0.45
EPHB4-206ENST00000487222 EFNA2O43921 213 aa12.27□□□□□ -0.45
EPHB4-206ENST00000487222 SCGB3A1Q96QR1 104 aa12.27□□□□□ -0.45
EPHB4-206ENST00000487222 LAMTOR2Q9Y2Q5 125 aa12.27□□□□□ -0.45
EPHB4-206ENST00000487222 C9JCJ5 164 aa12.26□□□□□ -0.45
EPHB4-206ENST00000487222 CD69Q07108 199 aa12.26□□□□□ -0.45
EPHB4-206ENST00000487222 NIT1Q86X76 327 aa12.26□□□□□ -0.45
EPHB4-206ENST00000487222 FOXC2Q99958 501 aa12.26□□□□□ -0.45
EPHB4-206ENST00000487222 A0A0G2JMZ2 1700 aa12.26□□□□□ -0.45
EPHB4-206ENST00000487222 LRRC37A2A6NM11 1700 aa12.26□□□□□ -0.45
EPHB4-206ENST00000487222 NYNRINQ9P2P1 1898 aaKnown RBP12.26□□□□□ -0.45
EPHB4-206ENST00000487222 A0A0G2JLM5 398 aa12.26□□□□□ -0.45
EPHB4-206ENST00000487222 MRPS16Q9Y3D3 137 aaKnown RBP12.26□□□□□ -0.45
EPHB4-206ENST00000487222 SNAI2O43623 268 aa12.26□□□□□ -0.45
EPHB4-206ENST00000487222 PRCDQ00LT1 54 aa12.26□□□□□ -0.45
EPHB4-206ENST00000487222 FAM166AQ6J272 317 aa12.26□□□□□ -0.45
EPHB4-206ENST00000487222 ST6GALNAC3Q8NDV1 305 aa12.26□□□□□ -0.45
EPHB4-206ENST00000487222 OCC1Q8TAD7 63 aa12.26□□□□□ -0.45
EPHB4-206ENST00000487222 ABHD17AQ96GS6 310 aa12.26□□□□□ -0.45
EPHB4-206ENST00000487222 MUC21A0A0G2JKD1 596 aa12.26□□□□□ -0.45
EPHB4-206ENST00000487222 MUC21A0A140T8X8 626 aa12.26□□□□□ -0.45
EPHB4-206ENST00000487222 COLCA2A8K830 154 aa12.26□□□□□ -0.45
EPHB4-206ENST00000487222 TTC32Q5I0X7 151 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms