RNA–Protein interactions for RNA: ENST00000485972.5

CDK5-204, Transcript of cyclin dependent kinase 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-204ENST00000485972 SLC35E1Q96K37 410 aa17.26■□□□□ 0.35
CDK5-204ENST00000485972 GGTLC1Q9BX51 225 aa17.26■□□□□ 0.35
CDK5-204ENST00000485972 F11RQ9Y624 299 aaKnown RBP17.26■□□□□ 0.35
CDK5-204ENST00000485972 SOX21Q9Y651 276 aaPredicted RBP17.26■□□□□ 0.35
CDK5-204ENST00000485972 NBPF19A0A087WUL8 3843 aa17.26■□□□□ 0.35
CDK5-204ENST00000485972 MFAP2P55001 183 aa17.25■□□□□ 0.35
CDK5-204ENST00000485972 TOR2AQ5JU69 321 aa17.25■□□□□ 0.35
CDK5-204ENST00000485972 UQCC3Q6UW78 93 aa17.25■□□□□ 0.35
CDK5-204ENST00000485972 OR2T6Q8NHC8 308 aa17.25■□□□□ 0.35
CDK5-204ENST00000485972 ARPC1AQ92747 370 aa17.25■□□□□ 0.35
CDK5-204ENST00000485972 MISP3Q96FF7 219 aa17.25■□□□□ 0.35
CDK5-204ENST00000485972 FAM103A1Q9BTL3 118 aaKnown RBP17.25■□□□□ 0.35
CDK5-204ENST00000485972 FNDC4Q9H6D8 234 aaPredicted RBP17.25■□□□□ 0.35
CDK5-204ENST00000485972 FBP1P09467 338 aa17.25■□□□□ 0.35
CDK5-204ENST00000485972 COMMD1Q8N668 190 aa17.25■□□□□ 0.35
CDK5-204ENST00000485972 OR10G4Q8NGN3 311 aa17.25■□□□□ 0.35
CDK5-204ENST00000485972 OR10G9Q8NGN4 311 aa17.25■□□□□ 0.35
CDK5-204ENST00000485972 OR10G7Q8NGN6 311 aa17.25■□□□□ 0.35
CDK5-204ENST00000485972 PIFOQ8TCI5 191 aa17.25■□□□□ 0.35
CDK5-204ENST00000485972 PLXNB1O43157 2135 aa17.24■□□□□ 0.35
CDK5-204ENST00000485972 SOX15O60248 233 aa17.24■□□□□ 0.35
CDK5-204ENST00000485972 SPSB3Q6PJ21 355 aa17.24■□□□□ 0.35
CDK5-204ENST00000485972 RPP25LQ8N5L8 163 aaKnown RBP17.24■□□□□ 0.35
CDK5-204ENST00000485972 ACY3Q96HD9 319 aa17.24■□□□□ 0.35
CDK5-204ENST00000485972 RCC1LQ96I51 464 aaKnown RBP17.24■□□□□ 0.35
CDK5-204ENST00000485972 SSX3Q99909 188 aa17.24■□□□□ 0.35
CDK5-204ENST00000485972 KCNIP2Q9NS61 270 aa17.24■□□□□ 0.35
CDK5-204ENST00000485972 HLA-DRB1P01911 266 aa17.23■□□□□ 0.35
CDK5-204ENST00000485972 SRSF3P84103 164 aaKnown RBP17.23■□□□□ 0.35
CDK5-204ENST00000485972 ZNF726P1Q15940 193 aa17.23■□□□□ 0.35
CDK5-204ENST00000485972 ACOT6Q3I5F7 207 aaPredicted RBP17.23■□□□□ 0.35
CDK5-204ENST00000485972 ETFRF1Q6IPR1 90 aa17.23■□□□□ 0.35
CDK5-204ENST00000485972 PXMP4Q9Y6I8 212 aa17.23■□□□□ 0.35
CDK5-204ENST00000485972 GCN1Q92616 2671 aaKnown RBP17.23■□□□□ 0.35
CDK5-204ENST00000485972 IGHV7-81A0A0B4J1V7 117 aa17.23■□□□□ 0.35
CDK5-204ENST00000485972 CORTO00230 105 aa17.23■□□□□ 0.35
CDK5-204ENST00000485972 DEFA4P12838 97 aa17.23■□□□□ 0.35
CDK5-204ENST00000485972 CTRB1P17538 263 aa17.23■□□□□ 0.35
CDK5-204ENST00000485972 M6PRP20645 277 aa17.23■□□□□ 0.35
CDK5-204ENST00000485972 CCL20P78556 96 aa17.23■□□□□ 0.35
CDK5-204ENST00000485972 NDPQ00604 133 aa17.23■□□□□ 0.35
CDK5-204ENST00000485972 MIC13Q5XKP0 118 aa17.23■□□□□ 0.35
CDK5-204ENST00000485972 CTRB2Q6GPI1 263 aa17.23■□□□□ 0.35
CDK5-204ENST00000485972 LFNGQ8NES3 379 aa17.23■□□□□ 0.35
CDK5-204ENST00000485972 BPIFCQ8NFQ6 507 aa17.23■□□□□ 0.35
CDK5-204ENST00000485972 WNT10AQ9GZT5 417 aa17.23■□□□□ 0.35
CDK5-204ENST00000485972 BTBD17A6NE02 478 aa17.22■□□□□ 0.35
CDK5-204ENST00000485972 IGHV3-48P01763 117 aa17.22■□□□□ 0.35
CDK5-204ENST00000485972 HBE1P02100 147 aa17.22■□□□□ 0.35
CDK5-204ENST00000485972 CYB5R2Q6BCY4 276 aa17.22■□□□□ 0.35
CDK5-204ENST00000485972 LCN15Q6UWW0 184 aa17.22■□□□□ 0.35
CDK5-204ENST00000485972 TMEM219Q86XT9 240 aa17.22■□□□□ 0.35
CDK5-204ENST00000485972 WFDC11Q8NEX6 87 aa17.22■□□□□ 0.35
CDK5-204ENST00000485972 MBD3L1Q8WWY6 194 aa17.22■□□□□ 0.35
CDK5-204ENST00000485972 NARS2Q96I59 477 aaKnown RBP17.22■□□□□ 0.35
CDK5-204ENST00000485972 RBM14Q96PK6 669 aaKnown RBP17.22■□□□□ 0.35
CDK5-204ENST00000485972 IGKV1OR2-108A0A075B7D4 117 aa17.21■□□□□ 0.35
CDK5-204ENST00000485972 TRAV1-1A0A0B4J248 108 aa17.21■□□□□ 0.35
CDK5-204ENST00000485972 RPL29P47914 159 aaKnown RBP17.21■□□□□ 0.35
CDK5-204ENST00000485972 BPIFB3P59826 476 aa17.21■□□□□ 0.35
CDK5-204ENST00000485972 SSX7Q7RTT5 188 aa17.21■□□□□ 0.35
CDK5-204ENST00000485972 LINC00052Q96N35 136 aa17.21■□□□□ 0.35
CDK5-204ENST00000485972 SLC25A33Q9BSK2 321 aa17.21■□□□□ 0.35
CDK5-204ENST00000485972 TMEM231Q9H6L2 316 aa17.21■□□□□ 0.35
CDK5-204ENST00000485972 SLC39A9Q9NUM3 307 aa17.21■□□□□ 0.35
CDK5-204ENST00000485972 DMRT1Q9Y5R6 373 aa17.21■□□□□ 0.35
CDK5-204ENST00000485972 KRBOX1C9JBD0 128 aa17.2■□□□□ 0.34
CDK5-204ENST00000485972 YIF1AO95070 293 aa17.2■□□□□ 0.34
CDK5-204ENST00000485972 B2MP61769 119 aa17.2■□□□□ 0.34
CDK5-204ENST00000485972 STPG3Q8N7X2 389 aa17.2■□□□□ 0.34
CDK5-204ENST00000485972 NPIPB3Q92617 1050 aa17.2■□□□□ 0.34
CDK5-204ENST00000485972 FAM210AQ96ND0 272 aa17.2■□□□□ 0.34
CDK5-204ENST00000485972 ACTR3CQ9C0K3 210 aaPredicted RBP17.2■□□□□ 0.34
CDK5-204ENST00000485972 TREM1Q9NP99 234 aa17.2■□□□□ 0.34
CDK5-204ENST00000485972 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.2■□□□□ 0.345e-7■■■■□ 23.1
CDK5-204ENST00000485972 CYB5BO43169 146 aa17.2■□□□□ 0.34
CDK5-204ENST00000485972 CRYGCP07315 174 aa17.2■□□□□ 0.34
CDK5-204ENST00000485972 OR10J1P30954 320 aa17.2■□□□□ 0.34
CDK5-204ENST00000485972 GCSAMLQ5JQS6 135 aa17.2■□□□□ 0.34
CDK5-204ENST00000485972 FAM122CQ6P4D5 195 aa17.2■□□□□ 0.34
CDK5-204ENST00000485972 C5orf56Q8N8D9 126 aa17.2■□□□□ 0.34
CDK5-204ENST00000485972 OR1L6Q8NGR2 347 aa17.2■□□□□ 0.34
CDK5-204ENST00000485972 HSPB9Q9BQS6 159 aa17.2■□□□□ 0.34
CDK5-204ENST00000485972 SLC45A2Q9UMX9 530 aa17.2■□□□□ 0.34
CDK5-204ENST00000485972 MOB4Q9Y3A3 225 aa17.2■□□□□ 0.34
CDK5-204ENST00000485972 NAV3Q8IVL0 2385 aa17.19■□□□□ 0.34
CDK5-204ENST00000485972 H3BUX3 64 aa17.19■□□□□ 0.34
CDK5-204ENST00000485972 MT-CO2P00403 227 aa17.19■□□□□ 0.34
CDK5-204ENST00000485972 EGR2P11161 476 aaPredicted RBP17.19■□□□□ 0.34
CDK5-204ENST00000485972 ZP3P21754 424 aa17.19■□□□□ 0.34
CDK5-204ENST00000485972 GUK1Q16774 197 aa17.19■□□□□ 0.34
CDK5-204ENST00000485972 ASPHD1Q5U4P2 390 aa17.19■□□□□ 0.34
CDK5-204ENST00000485972 SLC25A22Q9H936 323 aa17.19■□□□□ 0.34
CDK5-204ENST00000485972 MRPL36Q9P0J6 103 aaKnown RBP17.19■□□□□ 0.34
CDK5-204ENST00000485972 CTXND1A0A1B0GTU2 59 aa17.18■□□□□ 0.34
CDK5-204ENST00000485972 MAP1LC3B2A6NCE7 125 aa17.18■□□□□ 0.34
CDK5-204ENST00000485972 NPIPB5A8MRT5 1133 aa17.18■□□□□ 0.34
CDK5-204ENST00000485972 RND2P52198 227 aa17.18■□□□□ 0.34
CDK5-204ENST00000485972 PRR20EP86478 221 aa17.18■□□□□ 0.34
CDK5-204ENST00000485972 PRR20CP86479 221 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms