RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 IGKV1D-13A0A0B4J2D9 117 aa12.72□□□□□ -0.37
RXRA-203ENST00000484822 IGKV1-13P0DP09 117 aa12.72□□□□□ -0.37
RXRA-203ENST00000484822 PF4P02776 101 aa12.72□□□□□ -0.37
RXRA-203ENST00000484822 SUMO2P61956 95 aaKnown RBP12.72□□□□□ -0.37
RXRA-203ENST00000484822 CACNA1EQ15878 2313 aa12.71□□□□□ -0.37
RXRA-203ENST00000484822 COX5BP10606 129 aa12.71□□□□□ -0.37
RXRA-203ENST00000484822 VSIRQ9H7M9 311 aa12.71□□□□□ -0.37
RXRA-203ENST00000484822 DDB2Q92466 427 aa12.71□□□□□ -0.37
RXRA-203ENST00000484822 GFI1Q99684 422 aa12.71□□□□□ -0.37
RXRA-203ENST00000484822 ORAOV1Q8WV07 137 aa12.71□□□□□ -0.38
RXRA-203ENST00000484822 SDK2Q58EX2 2172 aa12.71□□□□□ -0.38
RXRA-203ENST00000484822 IGHV3-49A0A0A0MS15 119 aa12.71□□□□□ -0.38
RXRA-203ENST00000484822 ATP1A1-AS1Q5TC04 95 aa12.71□□□□□ -0.38
RXRA-203ENST00000484822 FADS6Q8N9I5 356 aa12.71□□□□□ -0.38
RXRA-203ENST00000484822 OR9G1Q8NH87 305 aa12.71□□□□□ -0.38
RXRA-203ENST00000484822 TMEM54Q969K7 222 aa12.71□□□□□ -0.38
RXRA-203ENST00000484822 C9JCJ5 164 aa12.7□□□□□ -0.38
RXRA-203ENST00000484822 ATP5IP56385 69 aaPredicted RBP12.7□□□□□ -0.38
RXRA-203ENST00000484822 TMEM30BQ3MIR4 351 aa12.7□□□□□ -0.38
RXRA-203ENST00000484822 NEU4Q8WWR8 484 aaPredicted RBP12.7□□□□□ -0.38
RXRA-203ENST00000484822 DEPPQ9NTK1 212 aa12.7□□□□□ -0.38
RXRA-203ENST00000484822 MOB4Q9Y3A3 225 aa12.7□□□□□ -0.38
RXRA-203ENST00000484822 GNG5P63218 68 aa12.7□□□□□ -0.38
RXRA-203ENST00000484822 PAPPA-AS1Q5QFB9 102 aa12.7□□□□□ -0.38
RXRA-203ENST00000484822 DCTN5Q9BTE1 182 aa12.7□□□□□ -0.38
RXRA-203ENST00000484822 IGLV3-12A0A075B6K2 115 aa12.7□□□□□ -0.38
RXRA-203ENST00000484822 C1orf194Q5T5A4 169 aa12.7□□□□□ -0.38
RXRA-203ENST00000484822 CYTL1Q9NRR1 136 aa12.7□□□□□ -0.38
RXRA-203ENST00000484822 MGAMO43451 1857 aa12.7□□□□□ -0.38
RXRA-203ENST00000484822 MRPL14Q6P1L8 145 aaKnown RBP12.7□□□□□ -0.38
RXRA-203ENST00000484822 TEX38Q6PEX7 206 aa12.7□□□□□ -0.38
RXRA-203ENST00000484822 COPS9Q8WXC6 57 aa12.7□□□□□ -0.38
RXRA-203ENST00000484822 TMEM186Q96B77 213 aa12.7□□□□□ -0.38
RXRA-203ENST00000484822 SPTBN1Q01082 2364 aaKnown RBP12.69□□□□□ -0.38
RXRA-203ENST00000484822 TEX45Q8NA69 505 aa12.69□□□□□ -0.38
RXRA-203ENST00000484822 OR5A1Q8NGJ0 315 aa12.69□□□□□ -0.38
RXRA-203ENST00000484822 IGKV3-20P01619 116 aa12.69□□□□□ -0.38
RXRA-203ENST00000484822 OR5AN1Q8NGI8 311 aa12.69□□□□□ -0.38
RXRA-203ENST00000484822 TSPOP30536 169 aa12.69□□□□□ -0.38
RXRA-203ENST00000484822 CKS1BP61024 79 aa12.69□□□□□ -0.38
RXRA-203ENST00000484822 MAJINQ3KP22 176 aa12.69□□□□□ -0.38
RXRA-203ENST00000484822 OR13A1Q8NGR1 328 aa12.69□□□□□ -0.38
RXRA-203ENST00000484822 IGKV1D-8A0A087WSZ0 117 aa12.69□□□□□ -0.38
RXRA-203ENST00000484822 SYNGR3O43761 229 aa12.69□□□□□ -0.38
RXRA-203ENST00000484822 LEPP41159 167 aa12.69□□□□□ -0.38
RXRA-203ENST00000484822 CACNG7P62955 275 aa12.69□□□□□ -0.38
RXRA-203ENST00000484822 OR4X2Q8NGF9 303 aa12.69□□□□□ -0.38
RXRA-203ENST00000484822 DNM1P46Q6ZS02 220 aa12.68□□□□□ -0.38
RXRA-203ENST00000484822 TMEM256Q8N2U0 113 aa12.68□□□□□ -0.38
RXRA-203ENST00000484822 CD33P20138 364 aa12.68□□□□□ -0.38
RXRA-203ENST00000484822 ID3Q02535 119 aa12.68□□□□□ -0.38
RXRA-203ENST00000484822 FAM159AQ6UWV7 190 aa12.68□□□□□ -0.38
RXRA-203ENST00000484822 PAQR4Q8N4S7 273 aaPredicted RBP12.68□□□□□ -0.38
RXRA-203ENST00000484822 FLVCR1-AS1Q8TAF5 88 aa12.68□□□□□ -0.38
RXRA-203ENST00000484822 VKORC1Q9BQB6 163 aa12.68□□□□□ -0.38
RXRA-203ENST00000484822 CHCHD2Q9Y6H1 151 aaPredicted RBP12.68□□□□□ -0.38
RXRA-203ENST00000484822 IGHV3OR16-8A0A075B7F1 116 aa12.68□□□□□ -0.38
RXRA-203ENST00000484822 IGHV3-66A0A0C4DH42 116 aa12.68□□□□□ -0.38
RXRA-203ENST00000484822 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.68□□□□□ -0.38
RXRA-203ENST00000484822 NPPCP23582 126 aa12.68□□□□□ -0.38
RXRA-203ENST00000484822 ZNF585BQ52M93 769 aa12.68□□□□□ -0.38
RXRA-203ENST00000484822 TIMM23BQ5SRD1 257 aa12.68□□□□□ -0.38
RXRA-203ENST00000484822 LINC00114Q6XXX2 140 aa12.68□□□□□ -0.38
RXRA-203ENST00000484822 FDCSPQ8NFU4 85 aa12.68□□□□□ -0.38
RXRA-203ENST00000484822 SMAD7O15105 426 aaKnown RBP12.67□□□□□ -0.38
RXRA-203ENST00000484822 FMC1Q96HJ9 113 aa12.67□□□□□ -0.38
RXRA-203ENST00000484822 C2orf88Q9BSF0 95 aa12.67□□□□□ -0.38
RXRA-203ENST00000484822 EP300Q09472 2414 aaPredicted RBP12.67□□□□□ -0.38
RXRA-203ENST00000484822 IGKV1-9A0A0C4DH69 117 aa12.67□□□□□ -0.38
RXRA-203ENST00000484822 J3QW42 95 aa12.67□□□□□ -0.38
RXRA-203ENST00000484822 IGHV3-23P01764 117 aa12.67□□□□□ -0.38
RXRA-203ENST00000484822 APOBEC3AP31941 199 aaPredicted RBP12.67□□□□□ -0.38
RXRA-203ENST00000484822 FER1L6-AS1Q8NA97 138 aa12.67□□□□□ -0.38
RXRA-203ENST00000484822 IMMP1LQ96LU5 166 aa12.67□□□□□ -0.38
RXRA-203ENST00000484822 Q9H3A6 140 aa12.67□□□□□ -0.38
RXRA-203ENST00000484822 OSTCQ9NRP0 149 aa12.67□□□□□ -0.38
RXRA-203ENST00000484822 TMEM242Q9NWH2 141 aa12.67□□□□□ -0.38
RXRA-203ENST00000484822 CRIM1Q9NZV1 1036 aa12.67□□□□□ -0.38
RXRA-203ENST00000484822 PPIAL4CA0A0B4J2A2 164 aa12.67□□□□□ -0.38
RXRA-203ENST00000484822 NPIPB11E5RHQ5 1161 aa12.67□□□□□ -0.38
RXRA-203ENST00000484822 TGFBR3LH3BV60 316 aa12.67□□□□□ -0.38
RXRA-203ENST00000484822 PPIAL4GP0DN37 164 aa12.67□□□□□ -0.38
RXRA-203ENST00000484822 RAB9AP51151 201 aa12.67□□□□□ -0.38
RXRA-203ENST00000484822 TPTE2P1Q5T6R2 138 aa12.67□□□□□ -0.38
RXRA-203ENST00000484822 ZNF837Q96EG3 531 aaPredicted RBP12.67□□□□□ -0.38
RXRA-203ENST00000484822 NYNRINQ9P2P1 1898 aaKnown RBP12.67□□□□□ -0.38
RXRA-203ENST00000484822 GAS1P54826 345 aa12.67□□□□□ -0.38
RXRA-203ENST00000484822 ZFP36L1Q07352 338 aaKnown RBP12.67□□□□□ -0.38
RXRA-203ENST00000484822 PRR31Q5SQ13 230 aa12.67□□□□□ -0.38
RXRA-203ENST00000484822 FAM57AQ8TBR7 257 aa12.67□□□□□ -0.38
RXRA-203ENST00000484822 CHD5Q8TDI0 1954 aa12.67□□□□□ -0.38
RXRA-203ENST00000484822 J3QRE1 110 aa12.66□□□□□ -0.38
RXRA-203ENST00000484822 ZNF664Q8N3J9 261 aa12.66□□□□□ -0.38
RXRA-203ENST00000484822 ZNF479Q96JC4 524 aa12.66□□□□□ -0.38
RXRA-203ENST00000484822 GNB1LQ9BYB4 327 aa12.66□□□□□ -0.38
RXRA-203ENST00000484822 VCX2Q9H322 139 aa12.66□□□□□ -0.38
RXRA-203ENST00000484822 MRPS16Q9Y3D3 137 aaKnown RBP12.66□□□□□ -0.38
RXRA-203ENST00000484822 CNOT1A5YKK6 2376 aaKnown RBP12.66□□□□□ -0.38
RXRA-203ENST00000484822 CIARTQ8N365 385 aaPredicted RBP12.66□□□□□ -0.38
RXRA-203ENST00000484822 FOXA2Q9Y261 457 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms