RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 ZNF2Q9BSG1 426 aaPredicted RBP3.1□□□□□ -1.91
VPS13D-208ENST00000481484 MFFQ9GZY8 342 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 C11orf68Q9H3H3 251 aaKnown RBP3.1□□□□□ -1.91
VPS13D-208ENST00000481484 TMEM231Q9H6L2 316 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 CCL28Q9NRJ3 127 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 NDUFA4L2Q9NRX3 87 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 TMEM14BQ9NUH8 114 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 RABL2AQ9UBK7 228 aaPredicted RBP3.1□□□□□ -1.91
VPS13D-208ENST00000481484 MLXQ9UH92 298 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 ELF5Q9UKW6 265 aaPredicted RBP3.1□□□□□ -1.91
VPS13D-208ENST00000481484 RABL2BQ9UNT1 228 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 KLK5Q9Y337 293 aaPredicted RBP3.1□□□□□ -1.91
VPS13D-208ENST00000481484 DMRT1Q9Y5R6 373 aa3.1□□□□□ -1.91
VPS13D-208ENST00000481484 SMIM31A0A1B0GVY4 71 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 OR2T8A6NH00 312 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 INS-IGF2F8WCM5 200 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 J3QRK9 145 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 DFFBO76075 338 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 OR2C1O95371 312 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 HLA-AP01891 365 aaKnown RBP3.09□□□□□ -1.91
VPS13D-208ENST00000481484 REG1AP05451 166 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 CLEC3BP05452 202 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 OR13C7P0DN81 318 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 GNRHRP30968 328 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 HRH1P35367 487 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 NPBWR1P48145 328 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 EIF2B2P49770 351 aaKnown RBP3.09□□□□□ -1.91
VPS13D-208ENST00000481484 TCTAP57738 103 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 BRWD1-AS2P59051 145 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 RND3P61587 244 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 TSPAN5P62079 268 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 PAFAH1B2P68402 229 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 MRPS10P82664 201 aaKnown RBP3.09□□□□□ -1.91
VPS13D-208ENST00000481484 SSBP1Q04837 148 aaKnown RBP3.09□□□□□ -1.91
VPS13D-208ENST00000481484 WT1-ASQ06250 92 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 RNF151Q2KHN1 245 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 ZNF585BQ52M93 769 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 Q56UQ5 140 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 DHRS11Q6UWP2 260 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 Q6ZSN1 163 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 FAM219AQ8IW50 185 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 Q8N1X5 172 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 SLC35G3Q8N808 338 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 CCDC71LQ8N9Z2 235 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 OR5H6Q8NGV6 325 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 OR6F1Q8NGZ6 308 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 OR4A16Q8NH70 328 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 GPX8Q8TED1 209 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 CACNG8Q8WXS5 425 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 LINC00476Q8WZB0 136 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 OR10C1Q96KK4 312 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 PDCD10Q9BUL8 212 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 WFDC10AQ9H1F0 79 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 RETNQ9HD89 108 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 OR51B2Q9Y5P1 312 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 KMT2AQ03164 3969 aa3.09□□□□□ -1.91
VPS13D-208ENST00000481484 HYDINQ4G0P3 5121 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 IGHV7-4-1A0A0J9YVY3 117 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 RPS10-NUDT3A0A1W2PQS6 291 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 A0A1W2PS18 150 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 CXorf65A6NEN9 183 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 CGB1A6NKQ9 187 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 E7EUB6 86 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 K7EIM0 57 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 SPRY2O43597 315 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 GSTZ1O43708 216 aaPredicted RBP3.08□□□□□ -1.92
VPS13D-208ENST00000481484 GNG7O60262 68 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 PGLYRP1O75594 196 aaPredicted RBP3.08□□□□□ -1.92
VPS13D-208ENST00000481484 SCAF4O95104 1147 aaKnown RBP3.08□□□□□ -1.92
VPS13D-208ENST00000481484 IGHV3-23P01764 117 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 CLEC2LP0C7M8 214 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 AKR1C2P52895 323 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 SUB1P53999 127 aaKnown RBP eCLIP3.08□□□□□ -1.92
VPS13D-208ENST00000481484 MFAP4P55083 255 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 ERHP84090 104 aaKnown RBP3.08□□□□□ -1.92
VPS13D-208ENST00000481484 SURF2Q15527 256 aaPredicted RBP3.08□□□□□ -1.92
VPS13D-208ENST00000481484 DEFB135Q30KP9 77 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 ODF3L2Q3SX64 289 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 RNASE10Q5GAN6 216 aaKnown RBP3.08□□□□□ -1.92
VPS13D-208ENST00000481484 SLC25A24Q6NUK1 477 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 MZT2AQ6P582 158 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 UNQ9165/PRO28630Q6UXU0 137 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 ZNF600Q6ZNG1 722 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 C19orf35Q6ZS72 473 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 H2BFWTQ7Z2G1 175 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 LYG2Q86SG7 212 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 NOXA1Q86UR1 476 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 TMEM116Q8NCL8 245 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 ZFAND1Q8TCF1 268 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 SCARB1Q8WTV0 552 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 FCAMRQ8WWV6 532 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 RNF183Q96D59 192 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 YIPF6Q96EC8 236 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 GRAMD2BQ96HH9 432 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 SEC22AQ96IW7 307 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 OVOL2Q9BRP0 275 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 C20orf24Q9BUV8 137 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 HINT2Q9BX68 163 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 ENY2Q9NPA8 101 aa3.08□□□□□ -1.92
VPS13D-208ENST00000481484 AGRNO00468 2067 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms