RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 LYG2Q86SG7 212 aa5.29□□□□□ -1.56
COL17A1-205ENST00000480127 RPP25LQ8N5L8 163 aaKnown RBP5.29□□□□□ -1.56
COL17A1-205ENST00000480127 ZFAND1Q8TCF1 268 aa5.29□□□□□ -1.56
COL17A1-205ENST00000480127 C15orf40Q8WUR7 153 aa5.29□□□□□ -1.56
COL17A1-205ENST00000480127 TMEM230Q96A57 120 aa5.29□□□□□ -1.56
COL17A1-205ENST00000480127 GALNT14Q96FL9 552 aa5.29□□□□□ -1.56
COL17A1-205ENST00000480127 GRAMD2BQ96HH9 432 aa5.29□□□□□ -1.56
COL17A1-205ENST00000480127 CHRDL1Q9BU40 450 aa5.29□□□□□ -1.56
COL17A1-205ENST00000480127 RHPN1-AS1Q9BWJ2 59 aa5.29□□□□□ -1.56
COL17A1-205ENST00000480127 EXTL2Q9UBQ6 330 aa5.29□□□□□ -1.56
COL17A1-205ENST00000480127 FBXL17Q9UF56 701 aa5.29□□□□□ -1.56
COL17A1-205ENST00000480127 FRAS1Q86XX4 4008 aa5.29□□□□□ -1.56
COL17A1-205ENST00000480127 IGHV3-66A0A0C4DH42 116 aa5.28□□□□□ -1.56
COL17A1-205ENST00000480127 CGB1A6NKQ9 187 aa5.28□□□□□ -1.56
COL17A1-205ENST00000480127 MPTX1A8MV57 137 aa5.28□□□□□ -1.56
COL17A1-205ENST00000480127 CA1P00915 261 aaPredicted RBP5.28□□□□□ -1.56
COL17A1-205ENST00000480127 CD5P06127 495 aa5.28□□□□□ -1.56
COL17A1-205ENST00000480127 PI3P19957 117 aa5.28□□□□□ -1.56
COL17A1-205ENST00000480127 PIGPP57054 158 aa5.28□□□□□ -1.56
COL17A1-205ENST00000480127 HSPE1P61604 102 aaKnown RBP5.28□□□□□ -1.56
COL17A1-205ENST00000480127 NCS1P62166 190 aa5.28□□□□□ -1.56
COL17A1-205ENST00000480127 Q6ZWC4 215 aa5.28□□□□□ -1.56
COL17A1-205ENST00000480127 TCF24Q7RTU0 167 aa5.28□□□□□ -1.56
COL17A1-205ENST00000480127 APRG1Q8IVJ8 170 aa5.28□□□□□ -1.56
COL17A1-205ENST00000480127 STHQ8IWL8 128 aa5.28□□□□□ -1.56
COL17A1-205ENST00000480127 STXBP6Q8NFX7 210 aa5.28□□□□□ -1.56
COL17A1-205ENST00000480127 YIPF6Q96EC8 236 aa5.28□□□□□ -1.56
COL17A1-205ENST00000480127 ATP6V0BQ99437 205 aa5.28□□□□□ -1.56
COL17A1-205ENST00000480127 OVOL2Q9BRP0 275 aa5.28□□□□□ -1.56
COL17A1-205ENST00000480127 FUNDC2Q9BWH2 189 aa5.28□□□□□ -1.56
COL17A1-205ENST00000480127 ZNF436Q9C0F3 470 aaPredicted RBP5.28□□□□□ -1.56
COL17A1-205ENST00000480127 HEYLQ9NQ87 328 aaPredicted RBP5.28□□□□□ -1.56
COL17A1-205ENST00000480127 TMEM14BQ9NUH8 114 aa5.28□□□□□ -1.56
COL17A1-205ENST00000480127 KIR2DL5BA0A0G2JN68 375 aa5.27□□□□□ -1.57
COL17A1-205ENST00000480127 KIR2DL5BA0A0G2JPC4 375 aa5.27□□□□□ -1.57
COL17A1-205ENST00000480127 IGHV7-4-1A0A0J9YVY3 117 aa5.27□□□□□ -1.57
COL17A1-205ENST00000480127 C3orf85A0A1B0GTC6 90 aa5.27□□□□□ -1.57
COL17A1-205ENST00000480127 RPS10-NUDT3A0A1W2PQS6 291 aa5.27□□□□□ -1.57
COL17A1-205ENST00000480127 A0A1W2PS18 150 aa5.27□□□□□ -1.57
COL17A1-205ENST00000480127 CEBPZOSA8MTT3 80 aa5.27□□□□□ -1.57
COL17A1-205ENST00000480127 DISC1C4P0D8 188 aa5.27□□□□□ -1.57
COL17A1-205ENST00000480127 K7EMT4 169 aa5.27□□□□□ -1.57
COL17A1-205ENST00000480127 CORTO00230 105 aa5.27□□□□□ -1.57
COL17A1-205ENST00000480127 RAB3DO95716 219 aa5.27□□□□□ -1.57
COL17A1-205ENST00000480127 ELK1P19419 428 aa5.27□□□□□ -1.57
COL17A1-205ENST00000480127 TBPP20226 339 aa5.27□□□□□ -1.57
COL17A1-205ENST00000480127 NPPCP23582 126 aa5.27□□□□□ -1.57
COL17A1-205ENST00000480127 PRCDQ00LT1 54 aa5.27□□□□□ -1.57
COL17A1-205ENST00000480127 KIR2DL5AQ8N109 375 aa5.27□□□□□ -1.57
COL17A1-205ENST00000480127 ARRDC1Q8N5I2 433 aa5.27□□□□□ -1.57
COL17A1-205ENST00000480127 KIR2DL5BQ8NHK3 375 aa5.27□□□□□ -1.57
COL17A1-205ENST00000480127 GPX8Q8TED1 209 aa5.27□□□□□ -1.57
COL17A1-205ENST00000480127 ZNF486Q96H40 463 aaPredicted RBP5.27□□□□□ -1.57
COL17A1-205ENST00000480127 METTL26Q96S19 204 aa5.27□□□□□ -1.57
COL17A1-205ENST00000480127 RNF2Q99496 336 aa5.27□□□□□ -1.57
COL17A1-205ENST00000480127 TXN2Q99757 166 aa5.27□□□□□ -1.57
COL17A1-205ENST00000480127 RARRES2Q99969 163 aa5.27□□□□□ -1.57
COL17A1-205ENST00000480127 CSTL1Q9H114 145 aa5.27□□□□□ -1.57
COL17A1-205ENST00000480127 FAM212BQ9NTI7 297 aaPredicted RBP5.27□□□□□ -1.57
COL17A1-205ENST00000480127 SMPXQ9UHP9 88 aa5.27□□□□□ -1.57
COL17A1-205ENST00000480127 TP53TG1Q9Y2A0 90 aa5.27□□□□□ -1.57
COL17A1-205ENST00000480127 PUS1Q9Y606 427 aaKnown RBP eCLIP5.27□□□□□ -1.57
COL17A1-205ENST00000480127 KIAA1109Q2LD37 5005 aa5.26□□□□□ -1.57
COL17A1-205ENST00000480127 K7EIM0 57 aa5.26□□□□□ -1.57
COL17A1-205ENST00000480127 CHEK1O14757 476 aa5.26□□□□□ -1.57
COL17A1-205ENST00000480127 DEDDO75618 318 aa5.26□□□□□ -1.57
COL17A1-205ENST00000480127 CD3DP04234 171 aa5.26□□□□□ -1.57
COL17A1-205ENST00000480127 C8orf88P0DMB2 117 aa5.26□□□□□ -1.57
COL17A1-205ENST00000480127 ZNF182P17025 639 aaPredicted RBP5.26□□□□□ -1.57
COL17A1-205ENST00000480127 NAT1P18440 290 aa5.26□□□□□ -1.57
COL17A1-205ENST00000480127 ETV6P41212 452 aa5.26□□□□□ -1.57
COL17A1-205ENST00000480127 TAS2R19P59542 299 aa5.26□□□□□ -1.57
COL17A1-205ENST00000480127 EWSR1Q01844 656 aaKnown RBP eCLIP5.26□□□□□ -1.57
COL17A1-205ENST00000480127 IL18Q14116 193 aa5.26□□□□□ -1.57
COL17A1-205ENST00000480127 MEF2DQ14814 521 aa5.26□□□□□ -1.57
COL17A1-205ENST00000480127 RBMS2Q15434 407 aaKnown RBP5.26□□□□□ -1.57
COL17A1-205ENST00000480127 IZUMO4Q1ZYL8 232 aa5.26□□□□□ -1.57
COL17A1-205ENST00000480127 SP6Q3SY56 376 aa5.26□□□□□ -1.57
COL17A1-205ENST00000480127 GPR107Q5VW38 600 aa5.26□□□□□ -1.57
COL17A1-205ENST00000480127 CEMP1Q6PRD7 247 aaPredicted RBP5.26□□□□□ -1.57
COL17A1-205ENST00000480127 ZNF600Q6ZNG1 722 aa5.26□□□□□ -1.57
COL17A1-205ENST00000480127 GPR141Q7Z602 305 aa5.26□□□□□ -1.57
COL17A1-205ENST00000480127 LYSMD2Q8IV50 215 aa5.26□□□□□ -1.57
COL17A1-205ENST00000480127 OR11H2Q8NH07 326 aa5.26□□□□□ -1.57
COL17A1-205ENST00000480127 SEC22AQ96IW7 307 aa5.26□□□□□ -1.57
COL17A1-205ENST00000480127 NXF2Q9GZY0 626 aaKnown RBP5.26□□□□□ -1.57
COL17A1-205ENST00000480127 MFFQ9GZY8 342 aa5.26□□□□□ -1.57
COL17A1-205ENST00000480127 MCUBQ9NWR8 336 aa5.26□□□□□ -1.57
COL17A1-205ENST00000480127 PFDN2Q9UHV9 154 aa5.26□□□□□ -1.57
COL17A1-205ENST00000480127 PAIP2BQ9ULR5 123 aaKnown RBP5.26□□□□□ -1.57
COL17A1-205ENST00000480127 DMRT1Q9Y5R6 373 aa5.26□□□□□ -1.57
COL17A1-205ENST00000480127 DBX1A6NMT0 343 aa5.25□□□□□ -1.57
COL17A1-205ENST00000480127 B3GALNT1O75752 331 aa5.25□□□□□ -1.57
COL17A1-205ENST00000480127 CTSGP08311 255 aa5.25□□□□□ -1.57
COL17A1-205ENST00000480127 ADMP35318 185 aa5.25□□□□□ -1.57
COL17A1-205ENST00000480127 MFAP2P55001 183 aa5.25□□□□□ -1.57
COL17A1-205ENST00000480127 UCP3P55916 312 aa5.25□□□□□ -1.57
COL17A1-205ENST00000480127 DEFB131AP59861 70 aa5.25□□□□□ -1.57
COL17A1-205ENST00000480127 TNFRSF9Q07011 255 aa5.25□□□□□ -1.57
COL17A1-205ENST00000480127 TMEM187Q14656 261 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms