RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 GAS1P54826 345 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 GTF3AQ92664 365 aaKnown RBP4.62□□□□□ -1.67
USF3-202ENST00000478658 SRSF8Q9BRL6 282 aaKnown RBP4.62□□□□□ -1.67
USF3-202ENST00000478658 DMRT1Q9Y5R6 373 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 ZNF236Q9UL36 1845 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 LINC00477Q96M19 166 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 EPDR1Q9UM22 224 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 EML6Q6ZMW3 1958 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 LTBP4Q8N2S1 1624 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 TRIOBPQ9H2D6 2365 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 DEFB108AA8MXU0 73 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 FXYD3Q14802 87 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 GAGE2AQ6NT46 116 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 VGLL2Q8N8G2 317 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 TMEM52Q8NDY8 209 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 DNAJC25-GNG10A0A024R161 153 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 A0A0G2JK05 382 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 FGF9P31371 208 aaPredicted RBP4.62□□□□□ -1.67
USF3-202ENST00000478658 PAQR4Q8N4S7 273 aaPredicted RBP4.62□□□□□ -1.67
USF3-202ENST00000478658 GAGE12JA6NER3 117 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 SPRY1O43609 319 aaPredicted RBP4.62□□□□□ -1.67
USF3-202ENST00000478658 IFITM1P13164 125 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 HERVK_113P63121 156 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 GAGE1Q13065 139 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 GAGE4Q13068 117 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 GAGE5Q13069 117 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 GAGE6Q13070 117 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 PRSS45Q7RTY3 260 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 RNF152Q8N8N0 203 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 DPM3Q9P2X0 92 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 MED13Q9UHV7 2174 aa4.62□□□□□ -1.67
USF3-202ENST00000478658 TMSB15BA0A087X1C1 80 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 RS1O15537 224 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 FRS3O43559 492 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 ZNF32P17041 273 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 DDTP30046 118 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 COL10A1Q03692 680 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 KLF5Q13887 457 aaPredicted RBP4.61□□□□□ -1.67
USF3-202ENST00000478658 MUSTN1Q8IVN3 82 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 WFDC9Q8NEX5 89 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 SMIM8Q96KF7 97 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 ZNF488Q96MN9 340 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 NCOR1O75376 2440 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 M0R381 172 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 UMODP07911 640 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 MPV17P39210 176 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 CD300EQ496F6 205 aaPredicted RBP4.61□□□□□ -1.67
USF3-202ENST00000478658 DEFB121Q5J5C9 76 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 C17orf99Q6UX52 265 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 SCTP09683 121 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 PNKDQ8N490 385 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 LY6G5BQ8NDX9 201 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 EMCNQ9ULC0 261 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 PEAK1Q9H792 1746 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 ARFGEF1Q9Y6D6 1849 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 PI3P19957 117 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 PCP4P48539 62 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 CCSMST1Q4G0I0 132 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 SPRED2Q7Z698 418 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 XIRP1Q702N8 1843 aaKnown RBP4.61□□□□□ -1.67
USF3-202ENST00000478658 IZUMO1RA6ND01 250 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 TISP43B9A030 160 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 K7EMI3 77 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 RAMP3O60896 148 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 REG1AP05451 166 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 VEGFBP49765 207 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 ANKRD34AQ69YU3 496 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 SIGLEC12Q96PQ1 595 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 NCOA6Q14686 2063 aaPredicted RBP4.61□□□□□ -1.67
USF3-202ENST00000478658 TCRBV7S3A2A0A539 114 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 NDUFA3O95167 84 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 MRPL14Q6P1L8 145 aaKnown RBP4.61□□□□□ -1.67
USF3-202ENST00000478658 LURAP1LQ8IV03 231 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 FZR1Q9UM11 496 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 EP300Q09472 2414 aaPredicted RBP4.61□□□□□ -1.67
USF3-202ENST00000478658 TM4SF1P30408 202 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 HTR6P50406 440 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 FGF12P61328 243 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 CCL7P80098 99 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 WDR38Q5JTN6 314 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 MAVSQ7Z434 540 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 TIMM21Q9BVV7 248 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 KLK15Q9H2R5 256 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 PRO1933Q9H354 126 aa4.61□□□□□ -1.67
USF3-202ENST00000478658 ABCA7Q8IZY2 2146 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 ZNF205O95201 554 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 RUNX1Q01196 453 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 CYP2G1PQ6ZSU1 146 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 MDS2Q8NDY4 140 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 PAPPA2Q9BXP8 1791 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 LRP6O75581 1613 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 TNFRSF1BP20333 461 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 EWSR1Q01844 656 aaKnown RBP eCLIP4.6□□□□□ -1.67
USF3-202ENST00000478658 TMEM99Q8N816 258 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 ZNF503Q96F45 646 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 RCHY1Q96PM5 261 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 TRAV14DV4A0A0A6YYC5 116 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 ZIC3O60481 467 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 CXCL5P42830 114 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 DAPP51397 102 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms