RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 SUB1P53999 127 aaKnown RBP eCLIP20.6■□□□□ 0.89
CCM2-211ENST00000478582 MFSD2BA6NFX1 497 aa20.59■□□□□ 0.89
CCM2-211ENST00000478582 INMT-MINDY4F8WBC2 141 aa20.59■□□□□ 0.89
CCM2-211ENST00000478582 RNASE2P10153 161 aaKnown RBP20.59■□□□□ 0.89
CCM2-211ENST00000478582 IGLL1P15814 213 aa20.59■□□□□ 0.89
CCM2-211ENST00000478582 ZP3P21754 424 aa20.59■□□□□ 0.89
CCM2-211ENST00000478582 RCC1LQ96I51 464 aaKnown RBP20.59■□□□□ 0.89
CCM2-211ENST00000478582 CCDC140Q96MF4 163 aa20.59■□□□□ 0.89
CCM2-211ENST00000478582 RBKSQ9H477 322 aa20.59■□□□□ 0.89
CCM2-211ENST00000478582 HEYLQ9NQ87 328 aaPredicted RBP20.59■□□□□ 0.89
CCM2-211ENST00000478582 K7EIM0 57 aa20.58■□□□□ 0.89
CCM2-211ENST00000478582 PRAF2O60831 178 aa20.58■□□□□ 0.89
CCM2-211ENST00000478582 NXPH3O95157 252 aa20.58■□□□□ 0.89
CCM2-211ENST00000478582 TRBV12-3P01733 135 aa20.58■□□□□ 0.89
CCM2-211ENST00000478582 HTR2BP41595 481 aa20.58■□□□□ 0.89
CCM2-211ENST00000478582 C12orf45Q8N5I9 185 aaPredicted RBP20.58■□□□□ 0.89
CCM2-211ENST00000478582 ZNF502Q8TBZ5 544 aa20.58■□□□□ 0.89
CCM2-211ENST00000478582 ATP6V0BQ99437 205 aa20.58■□□□□ 0.89
CCM2-211ENST00000478582 HIPK2Q9H2X6 1198 aa20.58■□□□□ 0.89
CCM2-211ENST00000478582 MPTX1A8MV57 137 aa20.57■□□□□ 0.88
CCM2-211ENST00000478582 SLURP1P55000 103 aa20.57■□□□□ 0.88
CCM2-211ENST00000478582 DTD1Q8TEA8 209 aa20.57■□□□□ 0.88
CCM2-211ENST00000478582 MCRIP2Q9BUT9 160 aaKnown RBP20.57■□□□□ 0.88
CCM2-211ENST00000478582 GPN1Q9HCN4 374 aaPredicted RBP20.57■□□□□ 0.88
CCM2-211ENST00000478582 S4R3C0 116 aa20.57■□□□□ 0.88
CCM2-211ENST00000478582 I3L2K1 104 aa20.56■□□□□ 0.88
CCM2-211ENST00000478582 HOXD3P31249 432 aaPredicted RBP20.56■□□□□ 0.88
CCM2-211ENST00000478582 REC114Q7Z4M0 266 aa20.56■□□□□ 0.88
CCM2-211ENST00000478582 SCARB1Q8WTV0 552 aa20.56■□□□□ 0.88
CCM2-211ENST00000478582 DCUN1D4Q92564 292 aa20.56■□□□□ 0.88
CCM2-211ENST00000478582 DLX4Q92988 240 aaPredicted RBP20.56■□□□□ 0.88
CCM2-211ENST00000478582 SNRPGP15A8MWD9 76 aa20.55■□□□□ 0.88
CCM2-211ENST00000478582 CORTO00230 105 aa20.55■□□□□ 0.88
CCM2-211ENST00000478582 BMPR1BO00238 502 aa20.55■□□□□ 0.88
CCM2-211ENST00000478582 PTTG1O95997 202 aa20.55■□□□□ 0.88
CCM2-211ENST00000478582 IGHV3-23P01764 117 aa20.55■□□□□ 0.88
CCM2-211ENST00000478582 ID3Q02535 119 aa20.55■□□□□ 0.88
CCM2-211ENST00000478582 C2orf83Q53S99 150 aa20.55■□□□□ 0.88
CCM2-211ENST00000478582 CLEC19AQ6UXS0 136 aa20.55■□□□□ 0.88
CCM2-211ENST00000478582 MISP3Q96FF7 219 aa20.55■□□□□ 0.88
CCM2-211ENST00000478582 MED6O75586 246 aa20.54■□□□□ 0.88
CCM2-211ENST00000478582 PRB2P02812 416 aaPredicted RBP20.54■□□□□ 0.88
CCM2-211ENST00000478582 KLF5Q13887 457 aaPredicted RBP20.54■□□□□ 0.88
CCM2-211ENST00000478582 SLC24A4Q8NFF2 622 aa20.54■□□□□ 0.88
CCM2-211ENST00000478582 OR4D5Q8NGN0 318 aa20.54■□□□□ 0.88
CCM2-211ENST00000478582 OR10C1Q96KK4 312 aa20.54■□□□□ 0.88
CCM2-211ENST00000478582 C21orf62Q9NYP8 219 aa20.54■□□□□ 0.88
CCM2-211ENST00000478582 U3KQ87 197 aa20.54■□□□□ 0.88
CCM2-211ENST00000478582 OVOL1O14753 267 aa20.53■□□□□ 0.88
CCM2-211ENST00000478582 MT-CO2P00403 227 aa20.53■□□□□ 0.88
CCM2-211ENST00000478582 CLEC3BP05452 202 aa20.53■□□□□ 0.88
CCM2-211ENST00000478582 SPNP16150 400 aa20.53■□□□□ 0.88
CCM2-211ENST00000478582 FCGR2BP31994 310 aaPredicted RBP20.53■□□□□ 0.88
CCM2-211ENST00000478582 ATP5IP56385 69 aaPredicted RBP20.53■□□□□ 0.88
CCM2-211ENST00000478582 SYNGR2O43760 224 aa20.52■□□□□ 0.88
CCM2-211ENST00000478582 GGCTO75223 188 aaKnown RBP20.52■□□□□ 0.88
CCM2-211ENST00000478582 ARL3P36405 182 aa20.52■□□□□ 0.88
CCM2-211ENST00000478582 DCTN2Q13561 401 aaKnown RBP20.52■□□□□ 0.88
CCM2-211ENST00000478582 RPEL1Q2QD12 228 aa20.52■□□□□ 0.88
CCM2-211ENST00000478582 IAH1Q2TAA2 248 aaPredicted RBP20.52■□□□□ 0.88
CCM2-211ENST00000478582 NOXA1Q86UR1 476 aa20.52■□□□□ 0.88
CCM2-211ENST00000478582 UXS1Q8NBZ7 420 aa20.52■□□□□ 0.88
CCM2-211ENST00000478582 TXN2Q99757 166 aa20.52■□□□□ 0.88
CCM2-211ENST00000478582 PRKDCP78527 4128 aaKnown RBP20.51■□□□□ 0.87
CCM2-211ENST00000478582 IGHV3-21A0A0B4J1V1 117 aa20.51■□□□□ 0.87
CCM2-211ENST00000478582 PPP5D1E7EU14 171 aa20.51■□□□□ 0.87
CCM2-211ENST00000478582 F8W735 103 aaPredicted RBP20.51■□□□□ 0.87
CCM2-211ENST00000478582 LY86O95711 162 aa20.51■□□□□ 0.87
CCM2-211ENST00000478582 C11orf87Q6NUJ2 197 aa20.51■□□□□ 0.87
CCM2-211ENST00000478582 ZBTB8BQ8NAP8 495 aaPredicted RBP20.51■□□□□ 0.87
CCM2-211ENST00000478582 TMEM170AQ8WVE7 144 aa20.51■□□□□ 0.87
CCM2-211ENST00000478582 CIB3Q96Q77 187 aaPredicted RBP20.51■□□□□ 0.87
CCM2-211ENST00000478582 GPR61Q9BZJ8 451 aa20.51■□□□□ 0.87
CCM2-211ENST00000478582 NPY1RP25929 384 aa20.5■□□□□ 0.87
CCM2-211ENST00000478582 NKX2-1P43699 371 aaPredicted RBP20.5■□□□□ 0.87
CCM2-211ENST00000478582 RNASEH2CQ8TDP1 164 aaKnown RBP20.5■□□□□ 0.87
CCM2-211ENST00000478582 PINX1Q96BK5 328 aaKnown RBP20.5■□□□□ 0.87
CCM2-211ENST00000478582 GAR1Q9NY12 217 aaKnown RBP20.5■□□□□ 0.87
CCM2-211ENST00000478582 IFNA10P01566 189 aa20.49■□□□□ 0.87
CCM2-211ENST00000478582 GPR183P32249 361 aa20.49■□□□□ 0.87
CCM2-211ENST00000478582 MFAP4P55083 255 aa20.49■□□□□ 0.87
CCM2-211ENST00000478582 TATDN3Q17R31 274 aa20.49■□□□□ 0.87
CCM2-211ENST00000478582 GPHB5Q86YW7 130 aa20.49■□□□□ 0.87
CCM2-211ENST00000478582 BSCL2Q96G97 398 aaPredicted RBP20.49■□□□□ 0.87
CCM2-211ENST00000478582 MAGT1Q9H0U3 335 aa20.49■□□□□ 0.87
CCM2-211ENST00000478582 AURKAIP1Q9NWT8 199 aaPredicted RBP20.49■□□□□ 0.87
CCM2-211ENST00000478582 TGP01266 2768 aa20.48■□□□□ 0.87
CCM2-211ENST00000478582 CCSO14618 274 aa20.48■□□□□ 0.87
CCM2-211ENST00000478582 TGOLN2O43493 480 aa20.48■□□□□ 0.87
CCM2-211ENST00000478582 OR2C1O95371 312 aa20.48■□□□□ 0.87
CCM2-211ENST00000478582 SPSB3Q6PJ21 355 aa20.48■□□□□ 0.87
CCM2-211ENST00000478582 FNDC4Q9H6D8 234 aaPredicted RBP20.48■□□□□ 0.87
CCM2-211ENST00000478582 IAPPP10997 89 aa20.47■□□□□ 0.87
CCM2-211ENST00000478582 SYNJ2BPP57105 145 aa20.47■□□□□ 0.87
CCM2-211ENST00000478582 C9orf66Q5T8R8 295 aa20.47■□□□□ 0.87
CCM2-211ENST00000478582 ACSM6Q6P461 480 aa20.47■□□□□ 0.87
CCM2-211ENST00000478582 C2orf50Q96LR7 162 aa20.47■□□□□ 0.87
CCM2-211ENST00000478582 GSKIPQ9P0R6 139 aa20.47■□□□□ 0.87
CCM2-211ENST00000478582 OR2T8A6NH00 312 aa20.46■□□□□ 0.87
CCM2-211ENST00000478582 SEC14L6B5MCN3 397 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms