RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 IL15RAQ13261 267 aa13.54□□□□□ -0.24
PTPN7-209ENST00000477554 AKAP14Q86UN6 197 aa13.54□□□□□ -0.24
PTPN7-209ENST00000477554 OR1L8Q8NGR8 309 aa13.54□□□□□ -0.24
PTPN7-209ENST00000477554 MCRIP2Q9BUT9 160 aaKnown RBP13.54□□□□□ -0.24
PTPN7-209ENST00000477554 HSPB7Q9UBY9 170 aa13.54□□□□□ -0.24
PTPN7-209ENST00000477554 S4R3C0 116 aa13.54□□□□□ -0.24
PTPN7-209ENST00000477554 MED6O75586 246 aa13.53□□□□□ -0.24
PTPN7-209ENST00000477554 SCGB1D2O95969 90 aa13.53□□□□□ -0.24
PTPN7-209ENST00000477554 SPCS3P61009 180 aa13.53□□□□□ -0.24
PTPN7-209ENST00000477554 ID3Q02535 119 aa13.53□□□□□ -0.24
PTPN7-209ENST00000477554 TNFRSF9Q07011 255 aa13.53□□□□□ -0.24
PTPN7-209ENST00000477554 TEX50A0A1B0GTY4 177 aa13.52□□□□□ -0.25
PTPN7-209ENST00000477554 H3BUA1 57 aa13.52□□□□□ -0.25
PTPN7-209ENST00000477554 OR2J3O76001 311 aa13.52□□□□□ -0.25
PTPN7-209ENST00000477554 IGHV3-23P01764 117 aa13.52□□□□□ -0.25
PTPN7-209ENST00000477554 RPL27AP46776 148 aaKnown RBP13.52□□□□□ -0.25
PTPN7-209ENST00000477554 RHOGP84095 191 aa13.52□□□□□ -0.25
PTPN7-209ENST00000477554 FGL1Q08830 312 aa13.52□□□□□ -0.25
PTPN7-209ENST00000477554 DEFB121Q5J5C9 76 aa13.52□□□□□ -0.25
PTPN7-209ENST00000477554 C9orf66Q5T8R8 295 aa13.52□□□□□ -0.25
PTPN7-209ENST00000477554 TTC9CQ8N5M4 171 aa13.52□□□□□ -0.25
PTPN7-209ENST00000477554 PPP1R1CQ8WVI7 109 aa13.52□□□□□ -0.25
PTPN7-209ENST00000477554 DMRT1Q9Y5R6 373 aa13.52□□□□□ -0.25
PTPN7-209ENST00000477554 TRBV9A0A0B4J1U6 114 aa13.51□□□□□ -0.25
PTPN7-209ENST00000477554 WRBO00258 174 aa13.51□□□□□ -0.25
PTPN7-209ENST00000477554 MBPP02686 304 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-209ENST00000477554 RLN2P04090 185 aa13.51□□□□□ -0.25
PTPN7-209ENST00000477554 PET100P0DJ07 73 aa13.51□□□□□ -0.25
PTPN7-209ENST00000477554 PSMB6P28072 239 aa13.51□□□□□ -0.25
PTPN7-209ENST00000477554 ZNF343Q6P1L6 599 aa13.51□□□□□ -0.25
PTPN7-209ENST00000477554 OR10W1Q8NGF6 305 aa13.51□□□□□ -0.25
PTPN7-209ENST00000477554 FANCD2OSQ96PS1 177 aa13.51□□□□□ -0.25
PTPN7-209ENST00000477554 RANGRFQ9HD47 186 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-209ENST00000477554 NDUFA4L2Q9NRX3 87 aa13.51□□□□□ -0.25
PTPN7-209ENST00000477554 HUWE1Q7Z6Z7 4374 aaKnown RBP13.5□□□□□ -0.25
PTPN7-209ENST00000477554 SYNGR2O43760 224 aa13.5□□□□□ -0.25
PTPN7-209ENST00000477554 SAP30O75446 220 aa13.5□□□□□ -0.25
PTPN7-209ENST00000477554 NXPH3O95157 252 aa13.5□□□□□ -0.25
PTPN7-209ENST00000477554 BRI3O95415 125 aa13.5□□□□□ -0.25
PTPN7-209ENST00000477554 LY86O95711 162 aa13.5□□□□□ -0.25
PTPN7-209ENST00000477554 EDN2P20800 178 aa13.5□□□□□ -0.25
PTPN7-209ENST00000477554 S100A10P60903 97 aa13.5□□□□□ -0.25
PTPN7-209ENST00000477554 PRCDQ00LT1 54 aa13.5□□□□□ -0.25
PTPN7-209ENST00000477554 RAB32Q13637 225 aa13.5□□□□□ -0.25
PTPN7-209ENST00000477554 ACSM6Q6P461 480 aa13.5□□□□□ -0.25
PTPN7-209ENST00000477554 IL34Q6ZMJ4 242 aa13.5□□□□□ -0.25
PTPN7-209ENST00000477554 OR2T35Q8NGX2 323 aa13.5□□□□□ -0.25
PTPN7-209ENST00000477554 ST6GAL2Q96JF0 529 aa13.5□□□□□ -0.25
PTPN7-209ENST00000477554 TMEM68Q96MH6 324 aa13.5□□□□□ -0.25
PTPN7-209ENST00000477554 ENY2Q9NPA8 101 aa13.5□□□□□ -0.25
PTPN7-209ENST00000477554 CEBPZOSA8MTT3 80 aa13.49□□□□□ -0.25
PTPN7-209ENST00000477554 K7EPK0 472 aa13.49□□□□□ -0.25
PTPN7-209ENST00000477554 PFDN1O60925 122 aa13.49□□□□□ -0.25
PTPN7-209ENST00000477554 NDUFB8O95169 186 aa13.49□□□□□ -0.25
PTPN7-209ENST00000477554 PVALBP20472 110 aaPredicted RBP13.49□□□□□ -0.25
PTPN7-209ENST00000477554 LRRC37A5PQ49AS3 106 aa13.49□□□□□ -0.25
PTPN7-209ENST00000477554 HSD17B13Q7Z5P4 300 aaPredicted RBP13.49□□□□□ -0.25
PTPN7-209ENST00000477554 WDR89Q96FK6 387 aaPredicted RBP13.49□□□□□ -0.25
PTPN7-209ENST00000477554 CIB3Q96Q77 187 aaPredicted RBP13.49□□□□□ -0.25
PTPN7-209ENST00000477554 SRSF8Q9BRL6 282 aaKnown RBP13.49□□□□□ -0.25
PTPN7-209ENST00000477554 HINT2Q9BX68 163 aa13.49□□□□□ -0.25
PTPN7-209ENST00000477554 RBKSQ9H477 322 aa13.49□□□□□ -0.25
PTPN7-209ENST00000477554 PLEKHA3Q9HB20 300 aa13.49□□□□□ -0.25
PTPN7-209ENST00000477554 LSM5Q9Y4Y9 91 aaKnown RBP13.49□□□□□ -0.25
PTPN7-209ENST00000477554 IGLC7A0M8Q6 106 aa13.48□□□□□ -0.25
PTPN7-209ENST00000477554 PPP5D1E7EU14 171 aa13.48□□□□□ -0.25
PTPN7-209ENST00000477554 BMPR1BO00238 502 aa13.48□□□□□ -0.25
PTPN7-209ENST00000477554 MPC2O95563 127 aa13.48□□□□□ -0.25
PTPN7-209ENST00000477554 HOXA1P49639 335 aaPredicted RBP13.48□□□□□ -0.25
PTPN7-209ENST00000477554 SYNJ2BPP57105 145 aa13.48□□□□□ -0.25
PTPN7-209ENST00000477554 POLR2GP62487 172 aaKnown RBP eCLIP13.48□□□□□ -0.25
PTPN7-209ENST00000477554 EXOSC2Q13868 293 aaKnown RBP13.48□□□□□ -0.25
PTPN7-209ENST00000477554 TCTE3Q8IZS6 198 aa13.48□□□□□ -0.25
PTPN7-209ENST00000477554 DTD1Q8TEA8 209 aa13.48□□□□□ -0.25
PTPN7-209ENST00000477554 RAB40CQ96S21 281 aa13.48□□□□□ -0.25
PTPN7-209ENST00000477554 NEURL2Q9BR09 285 aa13.48□□□□□ -0.25
PTPN7-209ENST00000477554 GPR61Q9BZJ8 451 aa13.48□□□□□ -0.25
PTPN7-209ENST00000477554 MAGT1Q9H0U3 335 aa13.48□□□□□ -0.25
PTPN7-209ENST00000477554 HIPK2Q9H2X6 1198 aa13.48□□□□□ -0.25
PTPN7-209ENST00000477554 PEF1Q9UBV8 284 aaKnown RBP13.48□□□□□ -0.25
PTPN7-209ENST00000477554 A0A0G2JLM5 398 aa13.47□□□□□ -0.25
PTPN7-209ENST00000477554 INS-IGF2F8WCM5 200 aa13.47□□□□□ -0.25
PTPN7-209ENST00000477554 SSSCA1O60232 199 aa13.47□□□□□ -0.25
PTPN7-209ENST00000477554 CTRB1P17538 263 aa13.47□□□□□ -0.25
PTPN7-209ENST00000477554 KLF5Q13887 457 aaPredicted RBP13.47□□□□□ -0.25
PTPN7-209ENST00000477554 C15orf32Q32M92 178 aa13.47□□□□□ -0.25
PTPN7-209ENST00000477554 CTRB2Q6GPI1 263 aa13.47□□□□□ -0.25
PTPN7-209ENST00000477554 C11orf87Q6NUJ2 197 aa13.47□□□□□ -0.25
PTPN7-209ENST00000477554 THAP6Q8TBB0 222 aa13.47□□□□□ -0.25
PTPN7-209ENST00000477554 RCL1Q9Y2P8 373 aaKnown RBP13.47□□□□□ -0.25
PTPN7-209ENST00000477554 SELENOKQ9Y6D0 94 aa13.47□□□□□ -0.25
PTPN7-209ENST00000477554 NPIPB5A8MRT5 1133 aa13.47□□□□□ -0.25
PTPN7-209ENST00000477554 L7N2F9 121 aa13.47□□□□□ -0.25
PTPN7-209ENST00000477554 DEDDO75618 318 aa13.47□□□□□ -0.25
PTPN7-209ENST00000477554 CRYGCP07315 174 aa13.47□□□□□ -0.25
PTPN7-209ENST00000477554 VAMP2P63027 116 aa13.47□□□□□ -0.25
PTPN7-209ENST00000477554 ERHP84090 104 aaKnown RBP13.47□□□□□ -0.25
PTPN7-209ENST00000477554 SPINK9Q5DT21 86 aa13.47□□□□□ -0.25
PTPN7-209ENST00000477554 USMG5Q96IX5 58 aa13.47□□□□□ -0.25
PTPN7-209ENST00000477554 CCDC140Q96MF4 163 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms