RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 HSPB7Q9UBY9 170 aa10.13□□□□□ -0.79
TOP3A-205ENST00000477508 IGHV4OR15-8A0A075B7B6 117 aa10.12□□□□□ -0.79
TOP3A-205ENST00000477508 A0A087WW49 117 aa10.12□□□□□ -0.79
TOP3A-205ENST00000477508 ANKRD34BA5PLL1 514 aa10.12□□□□□ -0.79
TOP3A-205ENST00000477508 PRAF2O60831 178 aa10.12□□□□□ -0.79
TOP3A-205ENST00000477508 PITX3O75364 302 aa10.12□□□□□ -0.79
TOP3A-205ENST00000477508 MED6O75586 246 aa10.12□□□□□ -0.79
TOP3A-205ENST00000477508 LY86O95711 162 aa10.12□□□□□ -0.79
TOP3A-205ENST00000477508 ATP5IP56385 69 aaPredicted RBP10.12□□□□□ -0.79
TOP3A-205ENST00000477508 SPINK9Q5DT21 86 aa10.12□□□□□ -0.79
TOP3A-205ENST00000477508 GGNBP1Q5YKI7 109 aa10.12□□□□□ -0.79
TOP3A-205ENST00000477508 C19orf35Q6ZS72 473 aa10.12□□□□□ -0.79
TOP3A-205ENST00000477508 GPN1Q9HCN4 374 aaPredicted RBP10.12□□□□□ -0.79
TOP3A-205ENST00000477508 GAR1Q9NY12 217 aaKnown RBP10.12□□□□□ -0.79
TOP3A-205ENST00000477508 DMRT1Q9Y5R6 373 aa10.12□□□□□ -0.79
TOP3A-205ENST00000477508 DEFA5Q01523 94 aa10.11□□□□□ -0.79
TOP3A-205ENST00000477508 PVRIGQ6DKI7 326 aa10.11□□□□□ -0.79
TOP3A-205ENST00000477508 MARVELD1Q9BSK0 173 aa10.11□□□□□ -0.79
TOP3A-205ENST00000477508 U3KQ87 197 aa10.11□□□□□ -0.79
TOP3A-205ENST00000477508 INMT-MINDY4F8WBC2 141 aa10.1□□□□□ -0.79
TOP3A-205ENST00000477508 OVOL1O14753 267 aa10.1□□□□□ -0.79
TOP3A-205ENST00000477508 GGCTO75223 188 aaKnown RBP10.1□□□□□ -0.79
TOP3A-205ENST00000477508 ADAP1O75689 374 aa10.1□□□□□ -0.79
TOP3A-205ENST00000477508 RNASE2P10153 161 aaKnown RBP10.1□□□□□ -0.79
TOP3A-205ENST00000477508 HOXD3P31249 432 aaPredicted RBP10.1□□□□□ -0.79
TOP3A-205ENST00000477508 MFAP2P55001 183 aa10.1□□□□□ -0.79
TOP3A-205ENST00000477508 RPEL1Q2QD12 228 aa10.1□□□□□ -0.79
TOP3A-205ENST00000477508 BSXQ3C1V8 233 aa10.1□□□□□ -0.79
TOP3A-205ENST00000477508 C12orf45Q8N5I9 185 aaPredicted RBP10.1□□□□□ -0.79
TOP3A-205ENST00000477508 OR52B4Q8NGK2 314 aa10.1□□□□□ -0.79
TOP3A-205ENST00000477508 ZNF502Q8TBZ5 544 aa10.1□□□□□ -0.79
TOP3A-205ENST00000477508 DTD1Q8TEA8 209 aa10.1□□□□□ -0.79
TOP3A-205ENST00000477508 MISP3Q96FF7 219 aa10.1□□□□□ -0.79
TOP3A-205ENST00000477508 CIB3Q96Q77 187 aaPredicted RBP10.1□□□□□ -0.79
TOP3A-205ENST00000477508 TXN2Q99757 166 aa10.1□□□□□ -0.79
TOP3A-205ENST00000477508 C21orf62Q9NYP8 219 aa10.1□□□□□ -0.79
TOP3A-205ENST00000477508 ZMAT5Q9UDW3 170 aaKnown RBP10.1□□□□□ -0.79
TOP3A-205ENST00000477508 MFSD2BA6NFX1 497 aa10.09□□□□□ -0.79
TOP3A-205ENST00000477508 SNRPGP15A8MWD9 76 aa10.09□□□□□ -0.79
TOP3A-205ENST00000477508 J3QL48 77 aa10.09□□□□□ -0.79
TOP3A-205ENST00000477508 K7EIM0 57 aa10.09□□□□□ -0.79
TOP3A-205ENST00000477508 PTTG1O95997 202 aa10.09□□□□□ -0.79
TOP3A-205ENST00000477508 CLEC3BP05452 202 aa10.09□□□□□ -0.79
TOP3A-205ENST00000477508 FCGR2BP31994 310 aaPredicted RBP10.09□□□□□ -0.79
TOP3A-205ENST00000477508 INSL3P51460 131 aa10.09□□□□□ -0.79
TOP3A-205ENST00000477508 SLURP1P55000 103 aa10.09□□□□□ -0.79
TOP3A-205ENST00000477508 MFAP4P55083 255 aa10.09□□□□□ -0.79
TOP3A-205ENST00000477508 KLF5Q13887 457 aaPredicted RBP10.09□□□□□ -0.79
TOP3A-205ENST00000477508 C2orf83Q53S99 150 aa10.09□□□□□ -0.79
TOP3A-205ENST00000477508 C9orf66Q5T8R8 295 aa10.09□□□□□ -0.79
TOP3A-205ENST00000477508 SPSB3Q6PJ21 355 aa10.09□□□□□ -0.79
TOP3A-205ENST00000477508 CLEC19AQ6UXS0 136 aa10.09□□□□□ -0.79
TOP3A-205ENST00000477508 SLC24A4Q8NFF2 622 aa10.09□□□□□ -0.79
TOP3A-205ENST00000477508 RNASEH2CQ8TDP1 164 aaKnown RBP10.09□□□□□ -0.79
TOP3A-205ENST00000477508 SCARB1Q8WTV0 552 aa10.09□□□□□ -0.79
TOP3A-205ENST00000477508 DCUN1D4Q92564 292 aa10.09□□□□□ -0.79
TOP3A-205ENST00000477508 SEC22CQ9BRL7 303 aa10.09□□□□□ -0.79
TOP3A-205ENST00000477508 RBKSQ9H477 322 aa10.09□□□□□ -0.79
TOP3A-205ENST00000477508 RPS10-NUDT3A0A1W2PQS6 291 aa10.08□□□□□ -0.8
TOP3A-205ENST00000477508 I3L2K1 104 aa10.08□□□□□ -0.8
TOP3A-205ENST00000477508 BMPR1BO00238 502 aa10.08□□□□□ -0.8
TOP3A-205ENST00000477508 NXPH3O95157 252 aa10.08□□□□□ -0.8
TOP3A-205ENST00000477508 MT-CO2P00403 227 aa10.08□□□□□ -0.8
TOP3A-205ENST00000477508 TRBV12-3P01733 135 aa10.08□□□□□ -0.8
TOP3A-205ENST00000477508 IGLL1P15814 213 aa10.08□□□□□ -0.8
TOP3A-205ENST00000477508 NPY1RP25929 384 aa10.08□□□□□ -0.8
TOP3A-205ENST00000477508 ARL3P36405 182 aa10.08□□□□□ -0.8
TOP3A-205ENST00000477508 RPP30P78346 268 aaKnown RBP10.08□□□□□ -0.8
TOP3A-205ENST00000477508 ID3Q02535 119 aa10.08□□□□□ -0.8
TOP3A-205ENST00000477508 SAMD5Q5TGI4 173 aa10.08□□□□□ -0.8
TOP3A-205ENST00000477508 GPHB5Q86YW7 130 aa10.08□□□□□ -0.8
TOP3A-205ENST00000477508 UXS1Q8NBZ7 420 aa10.08□□□□□ -0.8
TOP3A-205ENST00000477508 DLX4Q92988 240 aaPredicted RBP10.08□□□□□ -0.8
TOP3A-205ENST00000477508 BSCL2Q96G97 398 aaPredicted RBP10.08□□□□□ -0.8
TOP3A-205ENST00000477508 CCDC140Q96MF4 163 aa10.08□□□□□ -0.8
TOP3A-205ENST00000477508 ELOVL1Q9BW60 279 aa10.08□□□□□ -0.8
TOP3A-205ENST00000477508 SEC14L6B5MCN3 397 aa10.07□□□□□ -0.8
TOP3A-205ENST00000477508 WRBO00258 174 aa10.07□□□□□ -0.8
TOP3A-205ENST00000477508 WIPF1O43516 503 aa10.07□□□□□ -0.8
TOP3A-205ENST00000477508 SYNGR2O43760 224 aa10.07□□□□□ -0.8
TOP3A-205ENST00000477508 SCGB2A1O75556 95 aa10.07□□□□□ -0.8
TOP3A-205ENST00000477508 IFNA10P01566 189 aa10.07□□□□□ -0.8
TOP3A-205ENST00000477508 IGHV3-23P01764 117 aa10.07□□□□□ -0.8
TOP3A-205ENST00000477508 GPR183P32249 361 aa10.07□□□□□ -0.8
TOP3A-205ENST00000477508 NKX2-1P43699 371 aaPredicted RBP10.07□□□□□ -0.8
TOP3A-205ENST00000477508 NPBWR1P48145 328 aa10.07□□□□□ -0.8
TOP3A-205ENST00000477508 RAB11AP62491 216 aa10.07□□□□□ -0.8
TOP3A-205ENST00000477508 DCTN2Q13561 401 aaKnown RBP10.07□□□□□ -0.8
TOP3A-205ENST00000477508 IAH1Q2TAA2 248 aaPredicted RBP10.07□□□□□ -0.8
TOP3A-205ENST00000477508 FAM106AQ4KMX7 169 aa10.07□□□□□ -0.8
TOP3A-205ENST00000477508 ETFRF1Q6IPR1 90 aa10.07□□□□□ -0.8
TOP3A-205ENST00000477508 C1QL4Q86Z23 238 aa10.07□□□□□ -0.8
TOP3A-205ENST00000477508 PINX1Q96BK5 328 aaKnown RBP10.07□□□□□ -0.8
TOP3A-205ENST00000477508 PEMTQ9UBM1 199 aa10.07□□□□□ -0.8
TOP3A-205ENST00000477508 S4R3C0 116 aa10.07□□□□□ -0.8
TOP3A-205ENST00000477508 NOTCH1P46531 2555 aa10.06□□□□□ -0.8
TOP3A-205ENST00000477508 A6NJY4 79 aa10.06□□□□□ -0.8
TOP3A-205ENST00000477508 MPTX1A8MV57 137 aa10.06□□□□□ -0.8
TOP3A-205ENST00000477508 PPP5D1E7EU14 171 aa10.06□□□□□ -0.8
TOP3A-205ENST00000477508 LGALS9O00182 355 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms