RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 NRN1LQ496H8 165 aa15.59■□□□□ 0.09
VARS2-209ENST00000477288 PHLDA1Q8WV24 401 aaPredicted RBP15.59■□□□□ 0.09
VARS2-209ENST00000477288 LYNX1G3V0Z9 82 aa15.59■□□□□ 0.09
VARS2-209ENST00000477288 LYNX1P0DP58 116 aa15.59■□□□□ 0.09
VARS2-209ENST00000477288 MYOD1P15172 320 aa15.59■□□□□ 0.09
VARS2-209ENST00000477288 FBLN7Q53RD9 439 aa15.59■□□□□ 0.09
VARS2-209ENST00000477288 NBR2O15453 112 aa15.58■□□□□ 0.09
VARS2-209ENST00000477288 THBDP07204 575 aa15.58■□□□□ 0.09
VARS2-209ENST00000477288 ZP1P60852 638 aa15.58■□□□□ 0.09
VARS2-209ENST00000477288 UBE2DNLQ8IWF7 75 aa15.58■□□□□ 0.09
VARS2-209ENST00000477288 MTURNQ8N3F0 131 aa15.58■□□□□ 0.09
VARS2-209ENST00000477288 GGACTQ9BVM4 153 aa15.58■□□□□ 0.09
VARS2-209ENST00000477288 ST20Q9HBF5 79 aa15.58■□□□□ 0.09
VARS2-209ENST00000477288 CA1P00915 261 aaPredicted RBP15.58■□□□□ 0.08
VARS2-209ENST00000477288 VENTXO95231 258 aa15.58■□□□□ 0.08
VARS2-209ENST00000477288 SRD5A1P18405 259 aa15.58■□□□□ 0.08
VARS2-209ENST00000477288 PAX2Q02962 417 aa15.58■□□□□ 0.08
VARS2-209ENST00000477288 LTBRP36941 435 aa15.57■□□□□ 0.08
VARS2-209ENST00000477288 GTSCR1Q86UQ5 136 aa15.57■□□□□ 0.08
VARS2-209ENST00000477288 CYB5R2Q6BCY4 276 aa15.57■□□□□ 0.08
VARS2-209ENST00000477288 ORMDL3Q8N138 153 aa15.57■□□□□ 0.08
VARS2-209ENST00000477288 PRB4P10163 310 aaPredicted RBP15.57■□□□□ 0.08
VARS2-209ENST00000477288 IFI27P40305 119 aaPredicted RBP15.57■□□□□ 0.08
VARS2-209ENST00000477288 C1QTNF5Q9BXJ0 243 aa15.57■□□□□ 0.08
VARS2-209ENST00000477288 IQCF6A8MYZ5 107 aa15.57■□□□□ 0.08
VARS2-209ENST00000477288 CD200R1LQ6Q8B3 271 aa15.57■□□□□ 0.08
VARS2-209ENST00000477288 ZCCHC24Q8N2G6 241 aaKnown RBP15.57■□□□□ 0.08
VARS2-209ENST00000477288 ZNF688P0C7X2 276 aa15.56■□□□□ 0.08
VARS2-209ENST00000477288 CIARTQ8N365 385 aaPredicted RBP15.56■□□□□ 0.08
VARS2-209ENST00000477288 SPCS1Q9Y6A9 102 aa15.56■□□□□ 0.08
VARS2-209ENST00000477288 ERVH48-1M5A8F1 160 aa15.56■□□□□ 0.08
VARS2-209ENST00000477288 A0A0U1RRA0 63 aa15.56■□□□□ 0.08
VARS2-209ENST00000477288 ZNF837Q96EG3 531 aaPredicted RBP15.56■□□□□ 0.08
VARS2-209ENST00000477288 UMODP07911 640 aa15.56■□□□□ 0.08
VARS2-209ENST00000477288 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.56■□□□□ 0.08
VARS2-209ENST00000477288 ZXDCQ2QGD7 858 aaPredicted RBP15.56■□□□□ 0.08
VARS2-209ENST00000477288 ZNF600Q6ZNG1 722 aa15.56■□□□□ 0.08
VARS2-209ENST00000477288 FAM89BQ8N5H3 189 aa15.56■□□□□ 0.08
VARS2-209ENST00000477288 TDGF1P3P51864 188 aa15.55■□□□□ 0.08
VARS2-209ENST00000477288 SPACA3Q8IXA5 215 aa15.55■□□□□ 0.08
VARS2-209ENST00000477288 TRAV8-2A0A0B4J237 113 aa15.55■□□□□ 0.08
VARS2-209ENST00000477288 A0A0G2JK05 382 aa15.55■□□□□ 0.08
VARS2-209ENST00000477288 PPIFP30405 207 aaKnown RBP15.55■□□□□ 0.08
VARS2-209ENST00000477288 SAMD13Q5VXD3 122 aa15.55■□□□□ 0.08
VARS2-209ENST00000477288 DMRT1Q9Y5R6 373 aa15.55■□□□□ 0.08
VARS2-209ENST00000477288 CD8AP01732 235 aa15.55■□□□□ 0.08
VARS2-209ENST00000477288 LHX2P50458 406 aa15.55■□□□□ 0.08
VARS2-209ENST00000477288 TET1Q8NFU7 2136 aa15.55■□□□□ 0.08
VARS2-209ENST00000477288 SLC25A15Q9Y619 301 aa15.55■□□□□ 0.08
VARS2-209ENST00000477288 SAA2-SAA4A0A096LPE2 208 aa15.54■□□□□ 0.08
VARS2-209ENST00000477288 SAA2P0DJI9 122 aaPredicted RBP15.54■□□□□ 0.08
VARS2-209ENST00000477288 CACNA1IQ9P0X4 2223 aa15.54■□□□□ 0.08
VARS2-209ENST00000477288 TRAV2A0A0B4J234 112 aa15.54■□□□□ 0.08
VARS2-209ENST00000477288 C19orf67A6NJJ6 358 aa15.54■□□□□ 0.08
VARS2-209ENST00000477288 HIGD1CA8MV81 97 aa15.54■□□□□ 0.08
VARS2-209ENST00000477288 FAM90A1Q86YD7 464 aa15.54■□□□□ 0.08
VARS2-209ENST00000477288 OR9G4Q8NGQ1 327 aa15.54■□□□□ 0.08
VARS2-209ENST00000477288 TDRD6O60522 2096 aaKnown RBP15.54■□□□□ 0.08
VARS2-209ENST00000477288 IGHV3-64A0A075B6Q5 118 aa15.54■□□□□ 0.08
VARS2-209ENST00000477288 TRAV40A0A0B4J280 105 aa15.54■□□□□ 0.08
VARS2-209ENST00000477288 TGFBR3LH3BV60 316 aa15.54■□□□□ 0.08
VARS2-209ENST00000477288 CD33P20138 364 aa15.54■□□□□ 0.08
VARS2-209ENST00000477288 IZUMO1RA6ND01 250 aa15.54■□□□□ 0.08
VARS2-209ENST00000477288 TFF1P04155 84 aa15.54■□□□□ 0.08
VARS2-209ENST00000477288 VKORC1Q9BQB6 163 aa15.54■□□□□ 0.08
VARS2-209ENST00000477288 TM2D1Q9BX74 207 aa15.54■□□□□ 0.08
VARS2-209ENST00000477288 ZNF257Q9Y2Q1 563 aa15.54■□□□□ 0.08
VARS2-209ENST00000477288 IMMP1LQ96LU5 166 aa15.54■□□□□ 0.08
VARS2-209ENST00000477288 RBBP6Q7Z6E9 1792 aaKnown RBP15.53■□□□□ 0.08
VARS2-209ENST00000477288 TRAV14DV4A0A0A6YYC5 116 aa15.53■□□□□ 0.08
VARS2-209ENST00000477288 SSBP4Q9BWG4 385 aaPredicted RBP15.53■□□□□ 0.08
VARS2-209ENST00000477288 SIPA1L1O43166 1804 aa15.53■□□□□ 0.08
VARS2-209ENST00000477288 NHLRC3Q5JS37 347 aa15.53■□□□□ 0.08
VARS2-209ENST00000477288 EVI2AP22794 236 aa15.53■□□□□ 0.08
VARS2-209ENST00000477288 CHCHD5Q9BSY4 110 aa15.53■□□□□ 0.08
VARS2-209ENST00000477288 RNASE7Q9H1E1 156 aaKnown RBP15.53■□□□□ 0.08
VARS2-209ENST00000477288 OTORQ9NRC9 128 aa15.53■□□□□ 0.08
VARS2-209ENST00000477288 ICE1Q9Y2F5 2266 aa15.53■□□□□ 0.08
VARS2-209ENST00000477288 A0A1B0GV72 72 aa15.53■□□□□ 0.08
VARS2-209ENST00000477288 CD28P10747 220 aa15.53■□□□□ 0.08
VARS2-209ENST00000477288 CSRP1P21291 193 aaKnown RBP15.52■□□□□ 0.08
VARS2-209ENST00000477288 FABP5P3A8MUU1 101 aa15.52■□□□□ 0.08
VARS2-209ENST00000477288 PCP4P48539 62 aa15.52■□□□□ 0.08
VARS2-209ENST00000477288 RHOGP84095 191 aa15.52■□□□□ 0.08
VARS2-209ENST00000477288 PLPPR1Q8TBJ4 325 aa15.52■□□□□ 0.08
VARS2-209ENST00000477288 ZNF585BQ52M93 769 aa15.52■□□□□ 0.07
VARS2-209ENST00000477288 TMEM133Q9H2Q1 129 aa15.52■□□□□ 0.07
VARS2-209ENST00000477288 ZNF646O15015 1829 aaPredicted RBP15.52■□□□□ 0.07
VARS2-209ENST00000477288 DEFB121Q5J5C9 76 aa15.52■□□□□ 0.07
VARS2-209ENST00000477288 RNF182Q8N6D2 247 aa15.52■□□□□ 0.07
VARS2-209ENST00000477288 ZFC3H1O60293 1989 aaKnown RBP15.51■□□□□ 0.07
VARS2-209ENST00000477288 A0A1B0GW15 77 aa15.51■□□□□ 0.07
VARS2-209ENST00000477288 ADARB2-AS1A8MUL3 147 aa15.51■□□□□ 0.07
VARS2-209ENST00000477288 Q6AWC8 147 aa15.51■□□□□ 0.07
VARS2-209ENST00000477288 CCDC88CQ9P219 2028 aa15.51■□□□□ 0.07
VARS2-209ENST00000477288 GHRHP01286 108 aa15.51■□□□□ 0.07
VARS2-209ENST00000477288 DMRTA1Q5VZB9 504 aa15.51■□□□□ 0.07
VARS2-209ENST00000477288 MRPL14Q6P1L8 145 aaKnown RBP15.51■□□□□ 0.07
VARS2-209ENST00000477288 OR2K2Q8NGT1 345 aa15.51■□□□□ 0.07
VARS2-209ENST00000477288 LINC00527Q9UJ94 153 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms