RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 CD69Q07108 199 aa13.35□□□□□ -0.27
TMEM53-208ENST00000476724 GAMTQ14353 236 aa13.35□□□□□ -0.27
TMEM53-208ENST00000476724 OR10X1Q8NGY0 326 aa13.35□□□□□ -0.27
TMEM53-208ENST00000476724 TMEM167AQ8TBQ9 72 aa13.35□□□□□ -0.27
TMEM53-208ENST00000476724 SFRP2Q96HF1 295 aa13.35□□□□□ -0.27
TMEM53-208ENST00000476724 DYNLRB1Q9NP97 96 aa13.35□□□□□ -0.27
TMEM53-208ENST00000476724 TECRQ9NZ01 308 aaKnown RBP13.35□□□□□ -0.27
TMEM53-208ENST00000476724 DMRT1Q9Y5R6 373 aa13.35□□□□□ -0.27
TMEM53-208ENST00000476724 A0A087X0M5 115 aa13.35□□□□□ -0.27
TMEM53-208ENST00000476724 A0A1B0GX30 115 aa13.35□□□□□ -0.27
TMEM53-208ENST00000476724 SCO2A0A1W2PP80 73 aa13.35□□□□□ -0.27
TMEM53-208ENST00000476724 FCN3O75636 299 aa13.35□□□□□ -0.27
TMEM53-208ENST00000476724 ZNF137PP52743 207 aa13.35□□□□□ -0.27
TMEM53-208ENST00000476724 ACTL10Q5JWF8 245 aa13.35□□□□□ -0.27
TMEM53-208ENST00000476724 SPATA31B1PQ5VZV4 182 aa13.35□□□□□ -0.27
TMEM53-208ENST00000476724 PQLC2Q6ZP29 291 aa13.35□□□□□ -0.27
TMEM53-208ENST00000476724 C9JCJ5 164 aa13.34□□□□□ -0.27
TMEM53-208ENST00000476724 DVL1O14640 695 aa13.34□□□□□ -0.27
TMEM53-208ENST00000476724 IGHV2-70P01814 119 aa13.34□□□□□ -0.27
TMEM53-208ENST00000476724 TAS2R45P59539 299 aa13.34□□□□□ -0.27
TMEM53-208ENST00000476724 ANKHD1Q8IWZ3 2542 aaKnown RBP13.34□□□□□ -0.27
TMEM53-208ENST00000476724 APOBEC3AP31941 199 aaPredicted RBP13.33□□□□□ -0.27
TMEM53-208ENST00000476724 MC5RP33032 325 aa13.33□□□□□ -0.27
TMEM53-208ENST00000476724 LYPD2Q6UXB3 125 aa13.33□□□□□ -0.27
TMEM53-208ENST00000476724 OR1P1Q8NH06 330 aa13.33□□□□□ -0.27
TMEM53-208ENST00000476724 OR9G1Q8NH87 305 aa13.33□□□□□ -0.27
TMEM53-208ENST00000476724 ST6GALNAC6Q969X2 333 aa13.33□□□□□ -0.27
TMEM53-208ENST00000476724 WASHC3Q9Y3C0 194 aa13.33□□□□□ -0.27
TMEM53-208ENST00000476724 TRBV20OR9-2A0A075B6H5 130 aa13.33□□□□□ -0.28
TMEM53-208ENST00000476724 LINC00587B1AMM8 73 aa13.33□□□□□ -0.28
TMEM53-208ENST00000476724 FOXH1O75593 365 aa13.33□□□□□ -0.28
TMEM53-208ENST00000476724 FABP4P15090 132 aa13.33□□□□□ -0.28
TMEM53-208ENST00000476724 OR10J1P30954 320 aa13.33□□□□□ -0.28
TMEM53-208ENST00000476724 HLA-DRB5Q30154 266 aa13.33□□□□□ -0.28
TMEM53-208ENST00000476724 PDZD11Q5EBL8 140 aa13.33□□□□□ -0.28
TMEM53-208ENST00000476724 MIR17HGQ75NE6 70 aa13.33□□□□□ -0.28
TMEM53-208ENST00000476724 OCC1Q8TAD7 63 aa13.33□□□□□ -0.28
TMEM53-208ENST00000476724 RNF2Q99496 336 aa13.33□□□□□ -0.28
TMEM53-208ENST00000476724 IGKV1OR2-108A0A075B7D4 117 aa13.32□□□□□ -0.28
TMEM53-208ENST00000476724 OR5G3P0C626 314 aa13.32□□□□□ -0.28
TMEM53-208ENST00000476724 LOXP28300 417 aaPredicted RBP13.32□□□□□ -0.28
TMEM53-208ENST00000476724 PDLIM4P50479 330 aa13.32□□□□□ -0.28
TMEM53-208ENST00000476724 SUB1P53999 127 aaKnown RBP eCLIP13.32□□□□□ -0.28
TMEM53-208ENST00000476724 DLX6P56179 175 aa13.32□□□□□ -0.28
TMEM53-208ENST00000476724 SSX2Q16385 188 aa13.32□□□□□ -0.28
TMEM53-208ENST00000476724 CLEC12BQ2HXU8 276 aa13.32□□□□□ -0.28
TMEM53-208ENST00000476724 TMEM155Q4W5P6 130 aa13.32□□□□□ -0.28
TMEM53-208ENST00000476724 ZNF114Q8NC26 417 aa13.32□□□□□ -0.28
TMEM53-208ENST00000476724 OR10G8Q8NGN5 311 aa13.32□□□□□ -0.28
TMEM53-208ENST00000476724 RNASEH2CQ8TDP1 164 aaKnown RBP13.32□□□□□ -0.28
TMEM53-208ENST00000476724 PFDN5Q99471 154 aa13.32□□□□□ -0.28
TMEM53-208ENST00000476724 CTSZQ9UBR2 303 aa13.32□□□□□ -0.28
TMEM53-208ENST00000476724 TRAV9-1A0A075B6T8 112 aa13.32□□□□□ -0.28
TMEM53-208ENST00000476724 B9A039 149 aa13.32□□□□□ -0.28
TMEM53-208ENST00000476724 IL3RAP26951 378 aa13.32□□□□□ -0.28
TMEM53-208ENST00000476724 PSG5Q15238 335 aa13.32□□□□□ -0.28
TMEM53-208ENST00000476724 TEX38Q6PEX7 206 aa13.32□□□□□ -0.28
TMEM53-208ENST00000476724 OR10W1Q8NGF6 305 aa13.32□□□□□ -0.28
TMEM53-208ENST00000476724 SGMS2Q8NHU3 365 aa13.32□□□□□ -0.28
TMEM53-208ENST00000476724 PACRGQ96M98 296 aaPredicted RBP13.32□□□□□ -0.28
TMEM53-208ENST00000476724 HIST1H2BLQ99880 126 aa13.32□□□□□ -0.28
TMEM53-208ENST00000476724 MRPL32Q9BYC8 188 aaKnown RBP13.32□□□□□ -0.28
TMEM53-208ENST00000476724 TNCP24821 2201 aa13.31□□□□□ -0.28
TMEM53-208ENST00000476724 TRBV23-1A0A0A0MS06 115 aa13.31□□□□□ -0.28
TMEM53-208ENST00000476724 IGHV1-69-2A0A0G2JMI3 117 aa13.31□□□□□ -0.28
TMEM53-208ENST00000476724 A0A0U1RQK1 487 aa13.31□□□□□ -0.28
TMEM53-208ENST00000476724 ZNF320A2RRD8 509 aa13.31□□□□□ -0.28
TMEM53-208ENST00000476724 XKRY2A2RUG3 117 aa13.31□□□□□ -0.28
TMEM53-208ENST00000476724 ACTL6BO94805 426 aa13.31□□□□□ -0.28
TMEM53-208ENST00000476724 TGIF2LXQ8IUE1 241 aa13.31□□□□□ -0.28
TMEM53-208ENST00000476724 AURKAIP1Q9NWT8 199 aaPredicted RBP13.31□□□□□ -0.28
TMEM53-208ENST00000476724 IGSF10Q6WRI0 2623 aa13.3□□□□□ -0.28
TMEM53-208ENST00000476724 USP24Q9UPU5 2620 aa13.3□□□□□ -0.28
TMEM53-208ENST00000476724 PGPEP1LA6NFU8 196 aa13.3□□□□□ -0.28
TMEM53-208ENST00000476724 HIST1H1BP16401 226 aaKnown RBP13.3□□□□□ -0.28
TMEM53-208ENST00000476724 LGALS7P47929 136 aa13.3□□□□□ -0.28
TMEM53-208ENST00000476724 REG1BP48304 166 aa13.3□□□□□ -0.28
TMEM53-208ENST00000476724 VMA21Q3ZAQ7 101 aa13.3□□□□□ -0.28
TMEM53-208ENST00000476724 MOB3BQ86TA1 216 aa13.3□□□□□ -0.28
TMEM53-208ENST00000476724 TNFRSF14Q92956 283 aa13.3□□□□□ -0.28
TMEM53-208ENST00000476724 SPTBN1Q01082 2364 aaKnown RBP13.3□□□□□ -0.28
TMEM53-208ENST00000476724 IGHV1-8P0DP01 117 aa13.3□□□□□ -0.28
TMEM53-208ENST00000476724 ABCA4P78363 2273 aa13.3□□□□□ -0.28
TMEM53-208ENST00000476724 IGLV2-23P01705 113 aa13.29□□□□□ -0.28
TMEM53-208ENST00000476724 C8orf88P0DMB2 117 aa13.29□□□□□ -0.28
TMEM53-208ENST00000476724 RPL15P61313 204 aaKnown RBP13.29□□□□□ -0.28
TMEM53-208ENST00000476724 MLANAQ16655 118 aa13.29□□□□□ -0.28
TMEM53-208ENST00000476724 ITLN2Q8WWU7 325 aaPredicted RBP13.29□□□□□ -0.28
TMEM53-208ENST00000476724 TMEM37Q8WXS4 190 aa13.29□□□□□ -0.28
TMEM53-208ENST00000476724 SLC25A33Q9BSK2 321 aa13.29□□□□□ -0.28
TMEM53-208ENST00000476724 CACNA1BQ00975 2339 aa13.29□□□□□ -0.28
TMEM53-208ENST00000476724 A0A1W2PRE2 83 aa13.28□□□□□ -0.28
TMEM53-208ENST00000476724 FSTL3O95633 263 aa13.28□□□□□ -0.28
TMEM53-208ENST00000476724 ZNF672Q499Z4 452 aaPredicted RBP13.28□□□□□ -0.28
TMEM53-208ENST00000476724 MRPL41Q8IXM3 137 aaKnown RBP13.28□□□□□ -0.28
TMEM53-208ENST00000476724 EAF1Q96JC9 268 aaPredicted RBP13.28□□□□□ -0.28
TMEM53-208ENST00000476724 TRAPPC1Q9Y5R8 145 aa13.28□□□□□ -0.28
TMEM53-208ENST00000476724 HELTA6NFD8 242 aa13.28□□□□□ -0.28
TMEM53-208ENST00000476724 OR7C2O60412 319 aa13.28□□□□□ -0.28
TMEM53-208ENST00000476724 CNN1P51911 297 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms