RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 HIST1H1TP22492 207 aaPredicted RBP0.87□□□□□ -2.27
LTN1-204ENST00000475344 HIST1H2BOP23527 126 aa0.87□□□□□ -2.27
LTN1-204ENST00000475344 HIST1H2BBP33778 126 aa0.87□□□□□ -2.27
LTN1-204ENST00000475344 RPL5P46777 297 aaKnown RBP0.87□□□□□ -2.27
LTN1-204ENST00000475344 SULT1A1P50225 295 aa0.87□□□□□ -2.27
LTN1-204ENST00000475344 HIST1H2BDP58876 126 aa0.87□□□□□ -2.27
LTN1-204ENST00000475344 RPS20P60866 119 aaKnown RBP0.87□□□□□ -2.27
LTN1-204ENST00000475344 PSME3P61289 254 aa0.87□□□□□ -2.27
LTN1-204ENST00000475344 HIST1H2BCP62807 126 aa0.87□□□□□ -2.27
LTN1-204ENST00000475344 HIST2H2BEQ16778 126 aa0.87□□□□□ -2.27
LTN1-204ENST00000475344 ACOT6Q3I5F7 207 aaPredicted RBP0.87□□□□□ -2.27
LTN1-204ENST00000475344 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.87□□□□□ -2.27
LTN1-204ENST00000475344 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.87□□□□□ -2.27
LTN1-204ENST00000475344 AAED1Q7RTV5 226 aa0.87□□□□□ -2.27
LTN1-204ENST00000475344 C20orf196Q8IYI0 205 aa0.87□□□□□ -2.27
LTN1-204ENST00000475344 HIST1H2BHQ93079 126 aa0.87□□□□□ -2.27
LTN1-204ENST00000475344 SERPINI1Q99574 410 aa0.87□□□□□ -2.27
LTN1-204ENST00000475344 HIST1H2BNQ99877 126 aa0.87□□□□□ -2.27
LTN1-204ENST00000475344 HIST1H2BMQ99879 126 aa0.87□□□□□ -2.27
LTN1-204ENST00000475344 PRTFDC1Q9NRG1 225 aa0.87□□□□□ -2.27
LTN1-204ENST00000475344 OR5AC2Q9NZP5 309 aa0.87□□□□□ -2.27
LTN1-204ENST00000475344 CKLFQ9UBR5 152 aa0.87□□□□□ -2.27
LTN1-204ENST00000475344 SNURFQ9Y675 71 aa0.87□□□□□ -2.27
LTN1-204ENST00000475344 CEP192Q8TEP8 1941 aa0.87□□□□□ -2.27
LTN1-204ENST00000475344 HECW2Q9P2P5 1572 aa0.87□□□□□ -2.27
LTN1-204ENST00000475344 MTUS2Q5JR59 1369 aa0.86□□□□□ -2.27
LTN1-204ENST00000475344 ZNF469Q96JG9 3925 aaPredicted RBP0.86□□□□□ -2.27
LTN1-204ENST00000475344 SMIM23A6NLE4 172 aa0.86□□□□□ -2.27
LTN1-204ENST00000475344 GOLGA6L19H0YKK7 550 aa0.86□□□□□ -2.27
LTN1-204ENST00000475344 PSMD12O00232 456 aaPredicted RBP0.86□□□□□ -2.27
LTN1-204ENST00000475344 HCRTO43612 131 aa0.86□□□□□ -2.27
LTN1-204ENST00000475344 RPS17P08708 135 aaKnown RBP0.86□□□□□ -2.27
LTN1-204ENST00000475344 HTR1AP08908 422 aa0.86□□□□□ -2.27
LTN1-204ENST00000475344 CD79AP11912 226 aa0.86□□□□□ -2.27
LTN1-204ENST00000475344 SNRPD2P62316 118 aaKnown RBP0.86□□□□□ -2.27
LTN1-204ENST00000475344 HBA1P69905 142 aa0.86□□□□□ -2.27
LTN1-204ENST00000475344 LCN15Q6UWW0 184 aa0.86□□□□□ -2.27
LTN1-204ENST00000475344 ZNF826PQ6ZT77 177 aa0.86□□□□□ -2.27
LTN1-204ENST00000475344 BPIFA4PQ86YQ2 179 aa0.86□□□□□ -2.27
LTN1-204ENST00000475344 OR4D11Q8NGI4 311 aa0.86□□□□□ -2.27
LTN1-204ENST00000475344 PFN4Q8NHR9 129 aa0.86□□□□□ -2.27
LTN1-204ENST00000475344 SCGB3A1Q96QR1 104 aa0.86□□□□□ -2.27
LTN1-204ENST00000475344 COMMD5Q9GZQ3 224 aa0.86□□□□□ -2.27
LTN1-204ENST00000475344 MIXL1Q9H2W2 232 aa0.86□□□□□ -2.27
LTN1-204ENST00000475344 C11orf68Q9H3H3 251 aaKnown RBP0.86□□□□□ -2.27
LTN1-204ENST00000475344 TRABDQ9H4I3 376 aa0.86□□□□□ -2.27
LTN1-204ENST00000475344 FBXL12Q9NXK8 326 aa0.86□□□□□ -2.27
LTN1-204ENST00000475344 MRPL27Q9P0M9 148 aaKnown RBP0.86□□□□□ -2.27
LTN1-204ENST00000475344 VPS29Q9UBQ0 182 aa0.86□□□□□ -2.27
LTN1-204ENST00000475344 ECM29Q5VYK3 1845 aa0.86□□□□□ -2.27
LTN1-204ENST00000475344 CACNA1BQ00975 2339 aa0.86□□□□□ -2.27
LTN1-204ENST00000475344 MYH10P35580 1976 aa0.85□□□□□ -2.27
LTN1-204ENST00000475344 CLDN24A6NM45 220 aa0.85□□□□□ -2.27
LTN1-204ENST00000475344 TMEM212A6NML5 194 aa0.85□□□□□ -2.27
LTN1-204ENST00000475344 OR5F1O95221 314 aa0.85□□□□□ -2.27
LTN1-204ENST00000475344 IFNA10P01566 189 aa0.85□□□□□ -2.27
LTN1-204ENST00000475344 RNASE3P12724 160 aaKnown RBP0.85□□□□□ -2.27
LTN1-204ENST00000475344 RUNX1Q01196 453 aa0.85□□□□□ -2.27
LTN1-204ENST00000475344 PRB3Q04118 309 aaPredicted RBP0.85□□□□□ -2.27
LTN1-204ENST00000475344 ZNF846Q147U1 533 aa0.85□□□□□ -2.27
LTN1-204ENST00000475344 CDK10Q15131 360 aa0.85□□□□□ -2.27
LTN1-204ENST00000475344 SURF2Q15527 256 aaPredicted RBP0.85□□□□□ -2.27
LTN1-204ENST00000475344 LPCAT3Q6P1A2 487 aa0.85□□□□□ -2.27
LTN1-204ENST00000475344 LINC00471Q8N535 108 aa0.85□□□□□ -2.27
LTN1-204ENST00000475344 ANKRD29Q8N6D5 301 aa0.85□□□□□ -2.27
LTN1-204ENST00000475344 CLDN22Q8N7P3 220 aa0.85□□□□□ -2.27
LTN1-204ENST00000475344 ZNF565Q8N9K5 539 aa0.85□□□□□ -2.27
LTN1-204ENST00000475344 WFDC11Q8NEX6 87 aa0.85□□□□□ -2.27
LTN1-204ENST00000475344 C8orf76Q96K31 380 aa0.85□□□□□ -2.27
LTN1-204ENST00000475344 CCDC42Q96M95 316 aa0.85□□□□□ -2.27
LTN1-204ENST00000475344 NIPSNAP1Q9BPW8 284 aa0.85□□□□□ -2.27
LTN1-204ENST00000475344 REG4Q9BYZ8 158 aa0.85□□□□□ -2.27
LTN1-204ENST00000475344 UBAP1Q9NZ09 502 aa0.85□□□□□ -2.27
LTN1-204ENST00000475344 TTC21AQ8NDW8 1320 aa0.85□□□□□ -2.27
LTN1-204ENST00000475344 SCN8AQ9UQD0 1980 aa0.85□□□□□ -2.27
LTN1-204ENST00000475344 TOPBP1Q92547 1522 aa0.84□□□□□ -2.27
LTN1-204ENST00000475344 NUP155O75694 1391 aa0.84□□□□□ -2.27
LTN1-204ENST00000475344 ZFYVE9O95405 1425 aa0.84□□□□□ -2.27
LTN1-204ENST00000475344 RIC1Q4ADV7 1423 aa0.84□□□□□ -2.27
LTN1-204ENST00000475344 TRAV14DV4A0A0A6YYC5 116 aa0.84□□□□□ -2.27
LTN1-204ENST00000475344 A0A0D9SG52 128 aa0.84□□□□□ -2.27
LTN1-204ENST00000475344 FAM236DA0A1B0GTK5 79 aa0.84□□□□□ -2.27
LTN1-204ENST00000475344 OR4C46A6NHA9 309 aa0.84□□□□□ -2.27
LTN1-204ENST00000475344 SERPINA6P08185 405 aa0.84□□□□□ -2.27
LTN1-204ENST00000475344 FAM236CP0DP71 79 aa0.84□□□□□ -2.27
LTN1-204ENST00000475344 CRYGAP11844 174 aa0.84□□□□□ -2.27
LTN1-204ENST00000475344 COX6A1P12074 109 aa0.84□□□□□ -2.27
LTN1-204ENST00000475344 LSM6P62312 80 aaKnown RBP0.84□□□□□ -2.27
LTN1-204ENST00000475344 DEFB115Q30KQ5 88 aa0.84□□□□□ -2.27
LTN1-204ENST00000475344 SPANXN5Q5MJ07 72 aa0.84□□□□□ -2.27
LTN1-204ENST00000475344 TEX36Q5VZQ5 186 aa0.84□□□□□ -2.27
LTN1-204ENST00000475344 CLVS1Q8IUQ0 354 aaPredicted RBP0.84□□□□□ -2.27
LTN1-204ENST00000475344 TRAPPC5Q8IUR0 188 aa0.84□□□□□ -2.27
LTN1-204ENST00000475344 OR4C6Q8NH72 309 aa0.84□□□□□ -2.27
LTN1-204ENST00000475344 H1FXQ92522 213 aaKnown RBP0.84□□□□□ -2.27
LTN1-204ENST00000475344 TOMM6Q96B49 74 aa0.84□□□□□ -2.27
LTN1-204ENST00000475344 MRPL57Q9BQC6 102 aaKnown RBP0.84□□□□□ -2.27
LTN1-204ENST00000475344 ULBP3Q9BZM4 244 aa0.84□□□□□ -2.27
LTN1-204ENST00000475344 HEATR1Q9H583 2144 aaKnown RBP0.84□□□□□ -2.27
LTN1-204ENST00000475344 SNRNP200O75643 2136 aaKnown RBP0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms