RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 C20orf196Q8IYI0 205 aa0.7□□□□□ -2.3
ECHDC1-213ENST00000474240 OR51D1Q8NGF3 324 aa0.7□□□□□ -2.3
ECHDC1-213ENST00000474240 OR13C4Q8NGS5 318 aa0.7□□□□□ -2.3
ECHDC1-213ENST00000474240 MICAL3Q7RTP6 2002 aa0.7□□□□□ -2.3
ECHDC1-213ENST00000474240 DLG5Q8TDM6 1919 aa0.7□□□□□ -2.3
ECHDC1-213ENST00000474240 TRAV9-1A0A075B6T8 112 aa0.69□□□□□ -2.3
ECHDC1-213ENST00000474240 PQLC2LA1A4F0 135 aa0.69□□□□□ -2.3
ECHDC1-213ENST00000474240 DPRXA6NFQ7 191 aa0.69□□□□□ -2.3
ECHDC1-213ENST00000474240 OR1I1O60431 355 aa0.69□□□□□ -2.3
ECHDC1-213ENST00000474240 PRB4P10163 310 aaPredicted RBP0.69□□□□□ -2.3
ECHDC1-213ENST00000474240 RNASE3P12724 160 aaKnown RBP0.69□□□□□ -2.3
ECHDC1-213ENST00000474240 SPCS3P61009 180 aa0.69□□□□□ -2.3
ECHDC1-213ENST00000474240 RHOGP84095 191 aa0.69□□□□□ -2.3
ECHDC1-213ENST00000474240 PMAIP1Q13794 54 aa0.69□□□□□ -2.3
ECHDC1-213ENST00000474240 COTL1Q14019 142 aa0.69□□□□□ -2.3
ECHDC1-213ENST00000474240 RHEBQ15382 184 aa0.69□□□□□ -2.3
ECHDC1-213ENST00000474240 GUK1Q16774 197 aa0.69□□□□□ -2.3
ECHDC1-213ENST00000474240 CLVS1Q8IUQ0 354 aaPredicted RBP0.69□□□□□ -2.3
ECHDC1-213ENST00000474240 LINC00311Q8N616 119 aa0.69□□□□□ -2.3
ECHDC1-213ENST00000474240 OR51I1Q9H343 314 aa0.69□□□□□ -2.3
ECHDC1-213ENST00000474240 XPNPEP1Q9NQW7 623 aa0.69□□□□□ -2.3
ECHDC1-213ENST00000474240 ACER3Q9NUN7 267 aa0.69□□□□□ -2.3
ECHDC1-213ENST00000474240 TAS2R4Q9NYW5 299 aa0.69□□□□□ -2.3
ECHDC1-213ENST00000474240 SLC35A3Q9Y2D2 325 aa0.69□□□□□ -2.3
ECHDC1-213ENST00000474240 ARFGEF3Q5TH69 2177 aa0.69□□□□□ -2.3
ECHDC1-213ENST00000474240 KIF13BQ9NQT8 1826 aa0.68□□□□□ -2.3
ECHDC1-213ENST00000474240 ANAPC1Q9H1A4 1944 aa0.68□□□□□ -2.3
ECHDC1-213ENST00000474240 EEF1E1-BLOC1S5C9J1V9 151 aa0.68□□□□□ -2.3
ECHDC1-213ENST00000474240 M0R036 132 aa0.68□□□□□ -2.3
ECHDC1-213ENST00000474240 SULT1B1O43704 296 aa0.68□□□□□ -2.3
ECHDC1-213ENST00000474240 CRYZL1O95825 349 aa0.68□□□□□ -2.3
ECHDC1-213ENST00000474240 HLA-DRB1P01911 266 aa0.68□□□□□ -2.3
ECHDC1-213ENST00000474240 SPI1P17947 270 aa0.68□□□□□ -2.3
ECHDC1-213ENST00000474240 FKBP2P26885 142 aaKnown RBP0.68□□□□□ -2.3
ECHDC1-213ENST00000474240 ZNF93P35789 620 aaPredicted RBP0.68□□□□□ -2.3
ECHDC1-213ENST00000474240 SULT1A1P50225 295 aa0.68□□□□□ -2.3
ECHDC1-213ENST00000474240 CTAG1AP78358 180 aa0.68□□□□□ -2.3
ECHDC1-213ENST00000474240 KRT222Q8N1A0 295 aa0.68□□□□□ -2.3
ECHDC1-213ENST00000474240 HIST3H2BBQ8N257 126 aa0.68□□□□□ -2.3
ECHDC1-213ENST00000474240 Q8N814 137 aa0.68□□□□□ -2.3
ECHDC1-213ENST00000474240 OR5A1Q8NGJ0 315 aa0.68□□□□□ -2.3
ECHDC1-213ENST00000474240 DCUN1D1Q96GG9 259 aa0.68□□□□□ -2.3
ECHDC1-213ENST00000474240 ERGIC3Q9Y282 383 aa0.68□□□□□ -2.3
ECHDC1-213ENST00000474240 IGKV1D-42A0A075B6H8 117 aa0.67□□□□□ -2.3
ECHDC1-213ENST00000474240 EVPLLA8MZ36 301 aa0.67□□□□□ -2.3
ECHDC1-213ENST00000474240 PIRO00625 290 aa0.67□□□□□ -2.3
ECHDC1-213ENST00000474240 UBL3O95164 117 aa0.67□□□□□ -2.3
ECHDC1-213ENST00000474240 SNRPD2P62316 118 aaKnown RBP0.67□□□□□ -2.3
ECHDC1-213ENST00000474240 GDF5OSQ5U4N7 250 aa0.67□□□□□ -2.3
ECHDC1-213ENST00000474240 ANKRD29Q8N6D5 301 aa0.67□□□□□ -2.3
ECHDC1-213ENST00000474240 SIGLECL1Q8N7X8 197 aa0.67□□□□□ -2.3
ECHDC1-213ENST00000474240 PFN4Q8NHR9 129 aa0.67□□□□□ -2.3
ECHDC1-213ENST00000474240 TEX47Q8TBZ9 253 aa0.67□□□□□ -2.3
ECHDC1-213ENST00000474240 SFT2D1Q8WV19 159 aa0.67□□□□□ -2.3
ECHDC1-213ENST00000474240 SLC35B4Q969S0 331 aa0.67□□□□□ -2.3
ECHDC1-213ENST00000474240 TOMM6Q96B49 74 aa0.67□□□□□ -2.3
ECHDC1-213ENST00000474240 IMP4Q96G21 291 aaKnown RBP0.67□□□□□ -2.3
ECHDC1-213ENST00000474240 CMSS1Q9BQ75 279 aaKnown RBP0.67□□□□□ -2.3
ECHDC1-213ENST00000474240 CCDC90BQ9GZT6 254 aa0.67□□□□□ -2.3
ECHDC1-213ENST00000474240 CISHQ9NSE2 258 aa0.67□□□□□ -2.3
ECHDC1-213ENST00000474240 TMEM56-RWDD3S4R434 201 aa0.67□□□□□ -2.3
ECHDC1-213ENST00000474240 BAZ2BQ9UIF8 2168 aaKnown RBP0.67□□□□□ -2.3
ECHDC1-213ENST00000474240 LAMB4A4D0S4 1761 aa0.67□□□□□ -2.3
ECHDC1-213ENST00000474240 MAP3K5Q99683 1374 aa0.67□□□□□ -2.3
ECHDC1-213ENST00000474240 INMT-MINDY4F8WBC2 141 aa0.66□□□□□ -2.3
ECHDC1-213ENST00000474240 CLPSP04118 112 aa0.66□□□□□ -2.3
ECHDC1-213ENST00000474240 YPEL3P61236 119 aaPredicted RBP0.66□□□□□ -2.3
ECHDC1-213ENST00000474240 PATE1Q8WXA2 126 aa0.66□□□□□ -2.3
ECHDC1-213ENST00000474240 ITFG2Q969R8 447 aa0.66□□□□□ -2.3
ECHDC1-213ENST00000474240 PTH2Q96A98 100 aa0.66□□□□□ -2.3
ECHDC1-213ENST00000474240 GPR146Q96CH1 333 aa0.66□□□□□ -2.3
ECHDC1-213ENST00000474240 FBXL12Q9NXK8 326 aa0.66□□□□□ -2.3
ECHDC1-213ENST00000474240 GUCA1BQ9UMX6 200 aa0.66□□□□□ -2.3
ECHDC1-213ENST00000474240 POLEQ07864 2286 aa0.66□□□□□ -2.3
ECHDC1-213ENST00000474240 MAST2Q6P0Q8 1798 aa0.65□□□□□ -2.3
ECHDC1-213ENST00000474240 STRCQ7RTU9 1775 aa0.65□□□□□ -2.3
ECHDC1-213ENST00000474240 RALGAPA2Q2PPJ7 1873 aa0.65□□□□□ -2.3
ECHDC1-213ENST00000474240 ROS1P08922 2347 aa0.65□□□□□ -2.3
ECHDC1-213ENST00000474240 LOC110117498A0A087WWA1 95 aa0.65□□□□□ -2.31
ECHDC1-213ENST00000474240 TRAV1-1A0A0B4J248 108 aa0.65□□□□□ -2.31
ECHDC1-213ENST00000474240 EXOC1LA0A1B0GW35 172 aa0.65□□□□□ -2.31
ECHDC1-213ENST00000474240 J3QRK9 145 aa0.65□□□□□ -2.31
ECHDC1-213ENST00000474240 OR2T1O43869 369 aa0.65□□□□□ -2.31
ECHDC1-213ENST00000474240 RBP1P09455 135 aa0.65□□□□□ -2.31
ECHDC1-213ENST00000474240 MGST1P10620 155 aaKnown RBP0.65□□□□□ -2.31
ECHDC1-213ENST00000474240 MIFP14174 115 aa0.65□□□□□ -2.31
ECHDC1-213ENST00000474240 ANP32AP39687 249 aaKnown RBP0.65□□□□□ -2.31
ECHDC1-213ENST00000474240 PDE6HQ13956 83 aa0.65□□□□□ -2.31
ECHDC1-213ENST00000474240 ZNF418Q8TF45 676 aaPredicted RBP0.65□□□□□ -2.31
ECHDC1-213ENST00000474240 BORCS5Q969J3 196 aa0.65□□□□□ -2.31
ECHDC1-213ENST00000474240 OBSCN-AS1Q96MR7 158 aa0.65□□□□□ -2.31
ECHDC1-213ENST00000474240 OSTCQ9NRP0 149 aa0.65□□□□□ -2.31
ECHDC1-213ENST00000474240 ZFP30Q9Y2G7 519 aa0.65□□□□□ -2.31
ECHDC1-213ENST00000474240 DIDO1Q9BTC0 2240 aaKnown RBP0.64□□□□□ -2.31
ECHDC1-213ENST00000474240 TRBV6-8A0A0A6YYG3 113 aa0.64□□□□□ -2.31
ECHDC1-213ENST00000474240 C7orf71A4D174 169 aa0.64□□□□□ -2.31
ECHDC1-213ENST00000474240 C2orf70A6NJV1 201 aa0.64□□□□□ -2.31
ECHDC1-213ENST00000474240 TGOLN2O43493 480 aa0.64□□□□□ -2.31
ECHDC1-213ENST00000474240 IGKV1-5P01602 117 aa0.64□□□□□ -2.31
ECHDC1-213ENST00000474240 CTSDP07339 412 aaPredicted RBP0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms