RNA–Protein interactions for RNA: ENST00000473079.1

EPHB3-202, Transcript of EPH receptor B3, humanhuman

TSL 2

Gene EPHB3, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-202ENST00000473079 CLVS1Q8IUQ0 354 aaPredicted RBP15.5■□□□□ 0.07
EPHB3-202ENST00000473079 DYNC2LI1Q8TCX1 351 aa15.5■□□□□ 0.07
EPHB3-202ENST00000473079 SMIM4Q8WVI0 70 aa15.5■□□□□ 0.07
EPHB3-202ENST00000473079 MISP3Q96FF7 219 aa15.5■□□□□ 0.07
EPHB3-202ENST00000473079 RETNQ9HD89 108 aa15.5■□□□□ 0.07
EPHB3-202ENST00000473079 AKR1C2P52895 323 aa15.49■□□□□ 0.07
EPHB3-202ENST00000473079 PVRIGQ6DKI7 326 aa15.49■□□□□ 0.07
EPHB3-202ENST00000473079 MARCH1Q8TCQ1 289 aa15.49■□□□□ 0.07
EPHB3-202ENST00000473079 OR10C1Q96KK4 312 aa15.49■□□□□ 0.07
EPHB3-202ENST00000473079 C20orf24Q9BUV8 137 aa15.49■□□□□ 0.07
EPHB3-202ENST00000473079 GGTLC1Q9BX51 225 aa15.49■□□□□ 0.07
EPHB3-202ENST00000473079 NXF2Q9GZY0 626 aaKnown RBP15.49■□□□□ 0.07
EPHB3-202ENST00000473079 CCDC59Q9P031 241 aaKnown RBP15.49■□□□□ 0.07
EPHB3-202ENST00000473079 LOC102724200A0A096LPH7 203 aaPredicted RBP15.48■□□□□ 0.07
EPHB3-202ENST00000473079 ST8SIA3O43173 380 aa15.48■□□□□ 0.07
EPHB3-202ENST00000473079 SURF2Q15527 256 aaPredicted RBP15.48■□□□□ 0.07
EPHB3-202ENST00000473079 SP6Q3SY56 376 aa15.48■□□□□ 0.07
EPHB3-202ENST00000473079 SMPXQ9UHP9 88 aa15.48■□□□□ 0.07
EPHB3-202ENST00000473079 CSMD3Q7Z407 3707 aa15.47■□□□□ 0.07
EPHB3-202ENST00000473079 CDS2O95674 445 aa15.47■□□□□ 0.07
EPHB3-202ENST00000473079 SNCAP37840 140 aa15.47■□□□□ 0.07
EPHB3-202ENST00000473079 TRIM16LQ309B1 348 aa15.47■□□□□ 0.07
EPHB3-202ENST00000473079 ZFAND6Q6FIF0 208 aa15.47■□□□□ 0.07
EPHB3-202ENST00000473079 IL17DQ8TAD2 202 aa15.47■□□□□ 0.07
EPHB3-202ENST00000473079 RRNAD1Q96FB5 475 aaKnown RBP15.47■□□□□ 0.07
EPHB3-202ENST00000473079 DIRAS2Q96HU8 199 aa15.47■□□□□ 0.07
EPHB3-202ENST00000473079 FAM110AQ9BQ89 295 aa15.47■□□□□ 0.07
EPHB3-202ENST00000473079 RTBDNQ9BSG5 229 aaPredicted RBP15.47■□□□□ 0.07
EPHB3-202ENST00000473079 TMEM222Q9H0R3 208 aa15.47■□□□□ 0.07
EPHB3-202ENST00000473079 IGHV3OR16-8A0A075B7F1 116 aa15.46■□□□□ 0.07
EPHB3-202ENST00000473079 DISC1C4P0D8 188 aa15.46■□□□□ 0.07
EPHB3-202ENST00000473079 IFNA17P01571 189 aa15.46■□□□□ 0.07
EPHB3-202ENST00000473079 AARDQ4LEZ3 155 aa15.46■□□□□ 0.07
EPHB3-202ENST00000473079 FAM219AQ8IW50 185 aa15.46■□□□□ 0.07
EPHB3-202ENST00000473079 SLC35G3Q8N808 338 aa15.46■□□□□ 0.07
EPHB3-202ENST00000473079 IGHV7-4-1A0A0J9YVY3 117 aa15.45■□□□□ 0.06
EPHB3-202ENST00000473079 OR4C46A6NHA9 309 aa15.45■□□□□ 0.06
EPHB3-202ENST00000473079 CORTO00230 105 aa15.45■□□□□ 0.06
EPHB3-202ENST00000473079 ZNF207O43670 478 aaKnown RBP15.45■□□□□ 0.06
EPHB3-202ENST00000473079 GNG7O60262 68 aa15.45■□□□□ 0.06
EPHB3-202ENST00000473079 AKAIN1P0CW23 69 aa15.45■□□□□ 0.06
EPHB3-202ENST00000473079 NPBWR1P48145 328 aa15.45■□□□□ 0.06
EPHB3-202ENST00000473079 SUB1P53999 127 aaKnown RBP eCLIP15.45■□□□□ 0.06
EPHB3-202ENST00000473079 IL18Q14116 193 aa15.45■□□□□ 0.06
EPHB3-202ENST00000473079 SPINK9Q5DT21 86 aa15.45■□□□□ 0.06
EPHB3-202ENST00000473079 GLYATL2Q8WU03 294 aa15.45■□□□□ 0.06
EPHB3-202ENST00000473079 PINX1Q96BK5 328 aaKnown RBP15.45■□□□□ 0.06
EPHB3-202ENST00000473079 PDCD10Q9BUL8 212 aa15.45■□□□□ 0.06
EPHB3-202ENST00000473079 RHPN1-AS1Q9BWJ2 59 aa15.45■□□□□ 0.06
EPHB3-202ENST00000473079 GPR132Q9UNW8 380 aa15.45■□□□□ 0.06
EPHB3-202ENST00000473079 C14orf166Q9Y224 244 aaKnown RBP15.45■□□□□ 0.06
EPHB3-202ENST00000473079 A0A0G2JRQ6 117 aa15.44■□□□□ 0.06
EPHB3-202ENST00000473079 TEX13DA0A0J9YY54 714 aaPredicted RBP15.44■□□□□ 0.06
EPHB3-202ENST00000473079 CHEK1O14757 476 aa15.44■□□□□ 0.06
EPHB3-202ENST00000473079 GSTZ1O43708 216 aaPredicted RBP15.44■□□□□ 0.06
EPHB3-202ENST00000473079 YIF1AO95070 293 aa15.44■□□□□ 0.06
EPHB3-202ENST00000473079 IGHV3-48P01763 117 aa15.44■□□□□ 0.06
EPHB3-202ENST00000473079 ETV6P41212 452 aa15.44■□□□□ 0.06
EPHB3-202ENST00000473079 RPL5P46777 297 aaKnown RBP15.44■□□□□ 0.06
EPHB3-202ENST00000473079 FAAP20Q6NZ36 180 aa15.44■□□□□ 0.06
EPHB3-202ENST00000473079 TMEM116Q8NCL8 245 aa15.44■□□□□ 0.06
EPHB3-202ENST00000473079 DUSP18Q8NEJ0 188 aa15.44■□□□□ 0.06
EPHB3-202ENST00000473079 PRRT1Q99946 306 aa15.44■□□□□ 0.06
EPHB3-202ENST00000473079 TRAV14DV4A0A0A6YYC5 116 aa15.43■□□□□ 0.06
EPHB3-202ENST00000473079 LCE6AA0A183 80 aa15.43■□□□□ 0.06
EPHB3-202ENST00000473079 OR5AC1P0C628 307 aa15.43■□□□□ 0.06
EPHB3-202ENST00000473079 RNASE2P10153 161 aaKnown RBP15.43■□□□□ 0.06
EPHB3-202ENST00000473079 DHODHQ02127 395 aa15.43■□□□□ 0.06
EPHB3-202ENST00000473079 BSXQ3C1V8 233 aa15.43■□□□□ 0.06
EPHB3-202ENST00000473079 ODF3L2Q3SX64 289 aa15.43■□□□□ 0.06
EPHB3-202ENST00000473079 Q6ZRM9 215 aa15.43■□□□□ 0.06
EPHB3-202ENST00000473079 OR4C16Q8NGL9 310 aa15.43■□□□□ 0.06
EPHB3-202ENST00000473079 OR52E5Q8NH55 327 aa15.43■□□□□ 0.06
EPHB3-202ENST00000473079 RNF2Q99496 336 aa15.43■□□□□ 0.06
EPHB3-202ENST00000473079 SOSTQ9BQB4 213 aa15.43■□□□□ 0.06
EPHB3-202ENST00000473079 OVOL2Q9BRP0 275 aa15.43■□□□□ 0.06
EPHB3-202ENST00000473079 SLIRPQ9GZT3 109 aaKnown RBP15.43■□□□□ 0.06
EPHB3-202ENST00000473079 NAA60Q9H7X0 242 aa15.43■□□□□ 0.06
EPHB3-202ENST00000473079 RSL24D1Q9UHA3 163 aaKnown RBP15.43■□□□□ 0.06
EPHB3-202ENST00000473079 DYNC2H1Q8NCM8 4307 aaKnown RBP15.43■□□□□ 0.06
EPHB3-202ENST00000473079 TENM2Q9NT68 2774 aa15.42■□□□□ 0.06
EPHB3-202ENST00000473079 ANKRD20A5PA0PJZ0 165 aa15.42■□□□□ 0.06
EPHB3-202ENST00000473079 TMEM50AO95807 157 aa15.42■□□□□ 0.06
EPHB3-202ENST00000473079 SPCS3P61009 180 aa15.42■□□□□ 0.06
EPHB3-202ENST00000473079 RNASE11Q8TAA1 199 aaKnown RBP15.42■□□□□ 0.06
EPHB3-202ENST00000473079 RBPMSQ93062 196 aaKnown RBP15.42■□□□□ 0.06
EPHB3-202ENST00000473079 GINS3Q9BRX5 216 aa15.42■□□□□ 0.06
EPHB3-202ENST00000473079 ENY2Q9NPA8 101 aa15.42■□□□□ 0.06
EPHB3-202ENST00000473079 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.42■□□□□ 0.06
EPHB3-202ENST00000473079 TP53TG1Q9Y2A0 90 aa15.42■□□□□ 0.06
EPHB3-202ENST00000473079 STARD9Q9P2P6 4700 aa15.42■□□□□ 0.06
EPHB3-202ENST00000473079 CRYM-AS1A6NIL9 109 aa15.41■□□□□ 0.06
EPHB3-202ENST00000473079 H3BMQ9 156 aa15.41■□□□□ 0.06
EPHB3-202ENST00000473079 UBE2CO00762 179 aa15.41■□□□□ 0.06
EPHB3-202ENST00000473079 CD5P06127 495 aa15.41■□□□□ 0.06
EPHB3-202ENST00000473079 HOXA1P49639 335 aaPredicted RBP15.41■□□□□ 0.06
EPHB3-202ENST00000473079 APOC4P55056 127 aa15.41■□□□□ 0.06
EPHB3-202ENST00000473079 CMC4P56277 68 aaPredicted RBP15.41■□□□□ 0.06
EPHB3-202ENST00000473079 FAM90A2PQ658T7 463 aa15.41■□□□□ 0.06
EPHB3-202ENST00000473079 TOMM20LQ6UXN7 152 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms