RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 TXN2Q99757 166 aa8.59□□□□□ -1.03
COL4A3-205ENST00000471862 SPAG8Q99932 426 aaPredicted RBP8.59□□□□□ -1.03
COL4A3-205ENST00000471862 FAM110AQ9BQ89 295 aa8.59□□□□□ -1.03
COL4A3-205ENST00000471862 BCL7BQ9BQE9 202 aa8.59□□□□□ -1.03
COL4A3-205ENST00000471862 GAR1Q9NY12 217 aaKnown RBP8.59□□□□□ -1.03
COL4A3-205ENST00000471862 CCDC59Q9P031 241 aaKnown RBP8.59□□□□□ -1.03
COL4A3-205ENST00000471862 PLECQ15149 4684 aaKnown RBP8.59□□□□□ -1.03
COL4A3-205ENST00000471862 IGHV3OR16-8A0A075B7F1 116 aa8.58□□□□□ -1.04
COL4A3-205ENST00000471862 ST8SIA3O43173 380 aa8.58□□□□□ -1.04
COL4A3-205ENST00000471862 TMBIM6P55061 237 aa8.58□□□□□ -1.04
COL4A3-205ENST00000471862 ERHP84090 104 aaKnown RBP8.58□□□□□ -1.04
COL4A3-205ENST00000471862 SP6Q3SY56 376 aa8.58□□□□□ -1.04
COL4A3-205ENST00000471862 SCGB2B2Q4G0G5 96 aa8.58□□□□□ -1.04
COL4A3-205ENST00000471862 SPINK9Q5DT21 86 aa8.58□□□□□ -1.04
COL4A3-205ENST00000471862 FAAP20Q6NZ36 180 aa8.58□□□□□ -1.04
COL4A3-205ENST00000471862 CCDC71LQ8N9Z2 235 aa8.58□□□□□ -1.04
COL4A3-205ENST00000471862 RAB2BQ8WUD1 216 aa8.58□□□□□ -1.04
COL4A3-205ENST00000471862 GGTLC1Q9BX51 225 aa8.58□□□□□ -1.04
COL4A3-205ENST00000471862 NXF2Q9GZY0 626 aaKnown RBP8.58□□□□□ -1.04
COL4A3-205ENST00000471862 COPZ2Q9P299 210 aa8.58□□□□□ -1.04
COL4A3-205ENST00000471862 LOC102724200A0A096LPH7 203 aaPredicted RBP8.57□□□□□ -1.04
COL4A3-205ENST00000471862 NUPL2O15504 423 aaKnown RBP8.57□□□□□ -1.04
COL4A3-205ENST00000471862 ZNF207O43670 478 aaKnown RBP8.57□□□□□ -1.04
COL4A3-205ENST00000471862 B3GALNT1O75752 331 aa8.57□□□□□ -1.04
COL4A3-205ENST00000471862 ATG12O94817 140 aa8.57□□□□□ -1.04
COL4A3-205ENST00000471862 IGHV3-48P01763 117 aa8.57□□□□□ -1.04
COL4A3-205ENST00000471862 AKR1C2P52895 323 aa8.57□□□□□ -1.04
COL4A3-205ENST00000471862 RELQ04864 619 aaPredicted RBP8.57□□□□□ -1.04
COL4A3-205ENST00000471862 MEF2DQ14814 521 aa8.57□□□□□ -1.04
COL4A3-205ENST00000471862 ODF3L2Q3SX64 289 aa8.57□□□□□ -1.04
COL4A3-205ENST00000471862 AARDQ4LEZ3 155 aa8.57□□□□□ -1.04
COL4A3-205ENST00000471862 LHFPL5Q8TAF8 219 aa8.57□□□□□ -1.04
COL4A3-205ENST00000471862 RTBDNQ9BSG5 229 aaPredicted RBP8.57□□□□□ -1.04
COL4A3-205ENST00000471862 C20orf24Q9BUV8 137 aa8.57□□□□□ -1.04
COL4A3-205ENST00000471862 SMPXQ9UHP9 88 aa8.57□□□□□ -1.04
COL4A3-205ENST00000471862 HYDINQ4G0P3 5121 aa8.57□□□□□ -1.04
COL4A3-205ENST00000471862 IGHV7-4-1A0A0J9YVY3 117 aa8.56□□□□□ -1.04
COL4A3-205ENST00000471862 LCE6AA0A183 80 aa8.56□□□□□ -1.04
COL4A3-205ENST00000471862 CHEK1O14757 476 aa8.56□□□□□ -1.04
COL4A3-205ENST00000471862 GSTZ1O43708 216 aaPredicted RBP8.56□□□□□ -1.04
COL4A3-205ENST00000471862 CDS2O95674 445 aa8.56□□□□□ -1.04
COL4A3-205ENST00000471862 OR5AC1P0C628 307 aa8.56□□□□□ -1.04
COL4A3-205ENST00000471862 AKAIN1P0CW23 69 aa8.56□□□□□ -1.04
COL4A3-205ENST00000471862 RNASE2P10153 161 aaKnown RBP8.56□□□□□ -1.04
COL4A3-205ENST00000471862 SURF2Q15527 256 aaPredicted RBP8.56□□□□□ -1.04
COL4A3-205ENST00000471862 TRIM16LQ309B1 348 aa8.56□□□□□ -1.04
COL4A3-205ENST00000471862 BSXQ3C1V8 233 aa8.56□□□□□ -1.04
COL4A3-205ENST00000471862 LAMTOR1Q6IAA8 161 aa8.56□□□□□ -1.04
COL4A3-205ENST00000471862 Q6ZRM9 215 aa8.56□□□□□ -1.04
COL4A3-205ENST00000471862 SLC35G3Q8N808 338 aa8.56□□□□□ -1.04
COL4A3-205ENST00000471862 OR4C16Q8NGL9 310 aa8.56□□□□□ -1.04
COL4A3-205ENST00000471862 GLYATL2Q8WU03 294 aa8.56□□□□□ -1.04
COL4A3-205ENST00000471862 PINX1Q96BK5 328 aaKnown RBP8.56□□□□□ -1.04
COL4A3-205ENST00000471862 DIRAS2Q96HU8 199 aa8.56□□□□□ -1.04
COL4A3-205ENST00000471862 SOSTQ9BQB4 213 aa8.56□□□□□ -1.04
COL4A3-205ENST00000471862 OVOL2Q9BRP0 275 aa8.56□□□□□ -1.04
COL4A3-205ENST00000471862 SLIRPQ9GZT3 109 aaKnown RBP8.56□□□□□ -1.04
COL4A3-205ENST00000471862 TMEM222Q9H0R3 208 aa8.56□□□□□ -1.04
COL4A3-205ENST00000471862 RABL2AQ9UBK7 228 aaPredicted RBP8.56□□□□□ -1.04
COL4A3-205ENST00000471862 RABL2BQ9UNT1 228 aa8.56□□□□□ -1.04
COL4A3-205ENST00000471862 GPR132Q9UNW8 380 aa8.56□□□□□ -1.04
COL4A3-205ENST00000471862 TEX13DA0A0J9YY54 714 aaPredicted RBP8.55□□□□□ -1.04
COL4A3-205ENST00000471862 ANKRD20A5PA0PJZ0 165 aa8.55□□□□□ -1.04
COL4A3-205ENST00000471862 DISC1C4P0D8 188 aa8.55□□□□□ -1.04
COL4A3-205ENST00000471862 GNG7O60262 68 aa8.55□□□□□ -1.04
COL4A3-205ENST00000471862 IFNA17P01571 189 aa8.55□□□□□ -1.04
COL4A3-205ENST00000471862 IL18Q14116 193 aa8.55□□□□□ -1.04
COL4A3-205ENST00000471862 FAM90A2PQ658T7 463 aa8.55□□□□□ -1.04
COL4A3-205ENST00000471862 FAM219AQ8IW50 185 aa8.55□□□□□ -1.04
COL4A3-205ENST00000471862 RRNAD1Q96FB5 475 aaKnown RBP8.55□□□□□ -1.04
COL4A3-205ENST00000471862 RNF2Q99496 336 aa8.55□□□□□ -1.04
COL4A3-205ENST00000471862 RHPN1-AS1Q9BWJ2 59 aa8.55□□□□□ -1.04
COL4A3-205ENST00000471862 FNDC4Q9H6D8 234 aaPredicted RBP8.55□□□□□ -1.04
COL4A3-205ENST00000471862 NAA60Q9H7X0 242 aa8.55□□□□□ -1.04
COL4A3-205ENST00000471862 MRPL36Q9P0J6 103 aaKnown RBP8.55□□□□□ -1.04
COL4A3-205ENST00000471862 UBQLN2Q9UHD9 624 aa8.55□□□□□ -1.04
COL4A3-205ENST00000471862 C14orf166Q9Y224 244 aaKnown RBP8.55□□□□□ -1.04
COL4A3-205ENST00000471862 ALMS1Q8TCU4 4167 aa8.54□□□□□ -1.04
COL4A3-205ENST00000471862 OR4C46A6NHA9 309 aa8.54□□□□□ -1.04
COL4A3-205ENST00000471862 CRYM-AS1A6NIL9 109 aa8.54□□□□□ -1.04
COL4A3-205ENST00000471862 H3BMQ9 156 aa8.54□□□□□ -1.04
COL4A3-205ENST00000471862 CORTO00230 105 aa8.54□□□□□ -1.04
COL4A3-205ENST00000471862 TMEM50AO95807 157 aa8.54□□□□□ -1.04
COL4A3-205ENST00000471862 SNCAP37840 140 aa8.54□□□□□ -1.04
COL4A3-205ENST00000471862 ETV6P41212 452 aa8.54□□□□□ -1.04
COL4A3-205ENST00000471862 RPL5P46777 297 aaKnown RBP8.54□□□□□ -1.04
COL4A3-205ENST00000471862 NPBWR1P48145 328 aa8.54□□□□□ -1.04
COL4A3-205ENST00000471862 HOXA1P49639 335 aaPredicted RBP8.54□□□□□ -1.04
COL4A3-205ENST00000471862 TOMM20LQ6UXN7 152 aa8.54□□□□□ -1.04
COL4A3-205ENST00000471862 WFDC3Q8IUB2 231 aa8.54□□□□□ -1.04
COL4A3-205ENST00000471862 SELENOHQ8IZQ5 122 aaKnown RBP8.54□□□□□ -1.04
COL4A3-205ENST00000471862 TMEM116Q8NCL8 245 aa8.54□□□□□ -1.04
COL4A3-205ENST00000471862 DUSP18Q8NEJ0 188 aa8.54□□□□□ -1.04
COL4A3-205ENST00000471862 OR52E5Q8NH55 327 aa8.54□□□□□ -1.04
COL4A3-205ENST00000471862 RBPMSQ93062 196 aaKnown RBP8.54□□□□□ -1.04
COL4A3-205ENST00000471862 TMEM230Q96A57 120 aa8.54□□□□□ -1.04
COL4A3-205ENST00000471862 PDCD10Q9BUL8 212 aa8.54□□□□□ -1.04
COL4A3-205ENST00000471862 ZFAND3Q9H8U3 227 aa8.54□□□□□ -1.04
COL4A3-205ENST00000471862 IGHV3-49A0A0A0MS15 119 aa8.53□□□□□ -1.04
COL4A3-205ENST00000471862 TRAV14DV4A0A0A6YYC5 116 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms