RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 Q56UQ5 140 aa6.84□□□□□ -1.31
SHROOM3-203ENST00000469923 STEAP1BQ6NZ63 245 aa6.84□□□□□ -1.31
SHROOM3-203ENST00000469923 LPCAT3Q6P1A2 487 aa6.84□□□□□ -1.31
SHROOM3-203ENST00000469923 CMTM1Q8IZ96 169 aa6.84□□□□□ -1.31
SHROOM3-203ENST00000469923 SELENOHQ8IZQ5 122 aaKnown RBP6.84□□□□□ -1.31
SHROOM3-203ENST00000469923 TERB2Q8NHR7 220 aa6.84□□□□□ -1.31
SHROOM3-203ENST00000469923 CD300LFQ8TDQ1 290 aa6.84□□□□□ -1.31
SHROOM3-203ENST00000469923 VN1R17PQ8TDU5 208 aa6.84□□□□□ -1.31
SHROOM3-203ENST00000469923 TMEM190Q8WZ59 177 aa6.84□□□□□ -1.31
SHROOM3-203ENST00000469923 TMEM230Q96A57 120 aa6.84□□□□□ -1.31
SHROOM3-203ENST00000469923 PINX1Q96BK5 328 aaKnown RBP6.84□□□□□ -1.31
SHROOM3-203ENST00000469923 GPR146Q96CH1 333 aa6.84□□□□□ -1.31
SHROOM3-203ENST00000469923 C5orf66Q9H5L9 145 aa6.84□□□□□ -1.31
SHROOM3-203ENST00000469923 ZMAT4Q9H898 229 aa6.84□□□□□ -1.31
SHROOM3-203ENST00000469923 C21orf62Q9NYP8 219 aa6.84□□□□□ -1.31
SHROOM3-203ENST00000469923 PTTG2Q9NZH5 202 aa6.84□□□□□ -1.31
SHROOM3-203ENST00000469923 AGRNO00468 2067 aa6.84□□□□□ -1.31
SHROOM3-203ENST00000469923 C3orf85A0A1B0GTC6 90 aa6.83□□□□□ -1.32
SHROOM3-203ENST00000469923 A8MWP6 167 aa6.83□□□□□ -1.32
SHROOM3-203ENST00000469923 CTDSPLO15194 276 aa6.83□□□□□ -1.32
SHROOM3-203ENST00000469923 TOMM20LQ6UXN7 152 aa6.83□□□□□ -1.32
SHROOM3-203ENST00000469923 H2BFWTQ7Z2G1 175 aa6.83□□□□□ -1.32
SHROOM3-203ENST00000469923 GTSCR1Q86UQ5 136 aa6.83□□□□□ -1.32
SHROOM3-203ENST00000469923 WFDC3Q8IUB2 231 aa6.83□□□□□ -1.32
SHROOM3-203ENST00000469923 SLC38A6Q8IZM9 456 aa6.83□□□□□ -1.32
SHROOM3-203ENST00000469923 OR52B4Q8NGK2 314 aa6.83□□□□□ -1.32
SHROOM3-203ENST00000469923 OR4C16Q8NGL9 310 aa6.83□□□□□ -1.32
SHROOM3-203ENST00000469923 OR5B3Q8NH48 314 aa6.83□□□□□ -1.32
SHROOM3-203ENST00000469923 OR4A16Q8NH70 328 aa6.83□□□□□ -1.32
SHROOM3-203ENST00000469923 GLYATL2Q8WU03 294 aa6.83□□□□□ -1.32
SHROOM3-203ENST00000469923 BORCS5Q969J3 196 aa6.83□□□□□ -1.32
SHROOM3-203ENST00000469923 LSM10Q969L4 123 aaKnown RBP6.83□□□□□ -1.32
SHROOM3-203ENST00000469923 CXorf58Q96LI9 332 aa6.83□□□□□ -1.32
SHROOM3-203ENST00000469923 TECRQ9NZ01 308 aaKnown RBP6.83□□□□□ -1.32
SHROOM3-203ENST00000469923 SMPXQ9UHP9 88 aa6.83□□□□□ -1.32
SHROOM3-203ENST00000469923 PRNDQ9UKY0 176 aa6.83□□□□□ -1.32
SHROOM3-203ENST00000469923 CHEK1O14757 476 aa6.82□□□□□ -1.32
SHROOM3-203ENST00000469923 YIF1AO95070 293 aa6.82□□□□□ -1.32
SHROOM3-203ENST00000469923 OR5AC1P0C628 307 aa6.82□□□□□ -1.32
SHROOM3-203ENST00000469923 RNASE2P10153 161 aaKnown RBP6.82□□□□□ -1.32
SHROOM3-203ENST00000469923 RND3P61587 244 aa6.82□□□□□ -1.32
SHROOM3-203ENST00000469923 PRCDQ00LT1 54 aa6.82□□□□□ -1.32
SHROOM3-203ENST00000469923 FAM209BQ5JX69 171 aa6.82□□□□□ -1.32
SHROOM3-203ENST00000469923 FAM219AQ8IW50 185 aa6.82□□□□□ -1.32
SHROOM3-203ENST00000469923 OR51S1Q8NGJ8 323 aa6.82□□□□□ -1.32
SHROOM3-203ENST00000469923 C15orf40Q8WUR7 153 aa6.82□□□□□ -1.32
SHROOM3-203ENST00000469923 SMIM4Q8WVI0 70 aa6.82□□□□□ -1.32
SHROOM3-203ENST00000469923 ST8SIA2Q92186 375 aa6.82□□□□□ -1.32
SHROOM3-203ENST00000469923 SPATA25Q9BR10 227 aa6.82□□□□□ -1.32
SHROOM3-203ENST00000469923 AIFM2Q9BRQ8 373 aa6.82□□□□□ -1.32
SHROOM3-203ENST00000469923 SLC2A8Q9NY64 477 aa6.82□□□□□ -1.32
SHROOM3-203ENST00000469923 ANKRD20A5PA0PJZ0 165 aa6.81□□□□□ -1.32
SHROOM3-203ENST00000469923 DISC1C4P0D8 188 aa6.81□□□□□ -1.32
SHROOM3-203ENST00000469923 GSTZ1O43708 216 aaPredicted RBP6.81□□□□□ -1.32
SHROOM3-203ENST00000469923 DFFBO76075 338 aa6.81□□□□□ -1.32
SHROOM3-203ENST00000469923 TMEM50AO95807 157 aa6.81□□□□□ -1.32
SHROOM3-203ENST00000469923 DHFRP00374 187 aa6.81□□□□□ -1.32
SHROOM3-203ENST00000469923 FCGR2BP31994 310 aaPredicted RBP6.81□□□□□ -1.32
SHROOM3-203ENST00000469923 MRPS10P82664 201 aaKnown RBP6.81□□□□□ -1.32
SHROOM3-203ENST00000469923 TIGITQ495A1 244 aa6.81□□□□□ -1.32
SHROOM3-203ENST00000469923 FAM90A2PQ658T7 463 aa6.81□□□□□ -1.32
SHROOM3-203ENST00000469923 PVRIGQ6DKI7 326 aa6.81□□□□□ -1.32
SHROOM3-203ENST00000469923 ARRDC1Q8N5I2 433 aa6.81□□□□□ -1.32
SHROOM3-203ENST00000469923 OR2K2Q8NGT1 345 aa6.81□□□□□ -1.32
SHROOM3-203ENST00000469923 OR1P1Q8NH06 330 aa6.81□□□□□ -1.32
SHROOM3-203ENST00000469923 SRSF8Q9BRL6 282 aaKnown RBP6.81□□□□□ -1.32
SHROOM3-203ENST00000469923 RHPN1-AS1Q9BWJ2 59 aa6.81□□□□□ -1.32
SHROOM3-203ENST00000469923 MRPL27Q9P0M9 148 aaKnown RBP6.81□□□□□ -1.32
SHROOM3-203ENST00000469923 GPR132Q9UNW8 380 aa6.81□□□□□ -1.32
SHROOM3-203ENST00000469923 IGHV7-4-1A0A0J9YVY3 117 aa6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 TEX13DA0A0J9YY54 714 aaPredicted RBP6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 NDUFA4O00483 81 aa6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 NUPL2O15504 423 aaKnown RBP6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 IFNA17P01571 189 aa6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 AKAIN1P0CW23 69 aa6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 TBPP20226 339 aa6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 UCP1P25874 307 aa6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 MFAP4P55083 255 aa6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 DEFB1P60022 68 aa6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 SUPT4H1P63272 117 aaKnown RBP6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 SSBP1Q04837 148 aaKnown RBP6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 RBMS2Q15434 407 aaKnown RBP6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 ZNF79Q15937 498 aa6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 TRIM16LQ309B1 348 aa6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 PYDC2Q56P42 97 aa6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 RBPMS2Q6ZRY4 209 aaKnown RBP6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 LYZL2Q7Z4W2 148 aa6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 CCDC190Q86UF4 302 aa6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 CADM3Q8N126 398 aa6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 OR1L6Q8NGR2 347 aa6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 ZFAND1Q8TCF1 268 aa6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 BSCL2Q96G97 398 aaPredicted RBP6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 ZNF486Q96H40 463 aaPredicted RBP6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 TSC22D3Q99576 134 aa6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 NAA60Q9H7X0 242 aa6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 ZFAND3Q9H8U3 227 aa6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 COPZ2Q9P299 210 aa6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 UFC1Q9Y3C8 167 aa6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 V9GYH0 126 aa6.8□□□□□ -1.32
SHROOM3-203ENST00000469923 FAT2Q9NYQ8 4349 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms