RNA–Protein interactions for RNA: ENST00000468384.1

HMGB1-207, Transcript of high mobility group box 1, humanhuman

TSL 1 (best)

Gene HMGB1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-207ENST00000468384 UNQ9165/PRO28630Q6UXU0 137 aa2.99□□□□□ -1.93
HMGB1-207ENST00000468384 TMPRSS11AQ6ZMR5 421 aa2.99□□□□□ -1.93
HMGB1-207ENST00000468384 ZNF705AQ6ZN79 300 aaPredicted RBP2.99□□□□□ -1.93
HMGB1-207ENST00000468384 CCDC71LQ8N9Z2 235 aa2.99□□□□□ -1.93
HMGB1-207ENST00000468384 LGALS14Q8TCE9 139 aa2.99□□□□□ -1.93
HMGB1-207ENST00000468384 RXFP4Q8TDU9 374 aa2.99□□□□□ -1.93
HMGB1-207ENST00000468384 TMEM239Q8WW34 195 aa2.99□□□□□ -1.93
HMGB1-207ENST00000468384 UFD1Q92890 307 aa2.99□□□□□ -1.93
HMGB1-207ENST00000468384 SLC35B4Q969S0 331 aa2.99□□□□□ -1.93
HMGB1-207ENST00000468384 FBXL15Q9H469 300 aa2.99□□□□□ -1.93
HMGB1-207ENST00000468384 TUBB1Q9H4B7 451 aa2.99□□□□□ -1.93
HMGB1-207ENST00000468384 ARMC7Q9H6L4 198 aa2.99□□□□□ -1.93
HMGB1-207ENST00000468384 JPT2Q9H910 190 aa2.99□□□□□ -1.93
HMGB1-207ENST00000468384 HES4Q9HCC6 221 aa2.99□□□□□ -1.93
HMGB1-207ENST00000468384 ABCB9Q9NP78 766 aa2.99□□□□□ -1.93
HMGB1-207ENST00000468384 WARS2Q9UGM6 360 aaKnown RBP2.99□□□□□ -1.93
HMGB1-207ENST00000468384 RCL1Q9Y2P8 373 aaKnown RBP2.99□□□□□ -1.93
HMGB1-207ENST00000468384 V9GYY9 64 aa2.99□□□□□ -1.93
HMGB1-207ENST00000468384 TRAV5A0A0B4J249 113 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 A0A0B4J2E0 115 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 A0A1B0GX12 115 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 ZNF729A6NN14 1252 aaPredicted RBP2.98□□□□□ -1.93
HMGB1-207ENST00000468384 E9PLD3 99 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 H7C1C5 153 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 K7EP13 123 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 SLC17A2O00624 439 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 GPX5O75715 221 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 IGKV1D-12P01611 117 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 ATP5G1P05496 136 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 RPS17P08708 135 aaKnown RBP2.98□□□□□ -1.93
HMGB1-207ENST00000468384 OR1E2P47887 323 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 ATP5G3P48201 142 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 DEFB131AP59861 70 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 LCN6P62502 163 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 CACNG7P62955 275 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 GRB2P62993 217 aaKnown RBP2.98□□□□□ -1.93
HMGB1-207ENST00000468384 GNG3P63215 75 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 DR1Q01658 176 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 ATP5G2Q06055 141 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 TPRXLQ17RH7 258 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 MICAQ29983 383 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 SMUG1Q53HV7 270 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 COQ5Q5HYK3 327 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 NHLRC3Q5JS37 347 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 FUNDC1Q8IVP5 155 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 MTURNQ8N3F0 131 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 FTMTQ8N4E7 242 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 GRPEL2Q8TAA5 225 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 MS4A14Q96JA4 679 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 GPR22Q99680 433 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 C9orf16Q9BUW7 83 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 SYT4Q9H2B2 425 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 RBKSQ9H477 322 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 THUMPD1Q9NXG2 353 aaKnown RBP2.98□□□□□ -1.93
HMGB1-207ENST00000468384 BABAM2Q9NXR7 383 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 COA4Q9NYJ1 87 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 CDH10Q9Y6N8 788 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 LY96Q9Y6Y9 160 aa2.98□□□□□ -1.93
HMGB1-207ENST00000468384 A0A0A6YYH2 397 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 A6NJ64 397 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 OR5B21A6NL26 309 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 H3BN98 237 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 K7EN84 100 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 TAAR5O14804 337 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 PHOX2AO14813 284 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 LECT2O14960 151 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 CCNKO75909 580 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 FGGP02679 453 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 RPSAP08865 295 aaKnown RBP2.97□□□□□ -1.93
HMGB1-207ENST00000468384 DEFB130BP0DP73 79 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 DEFB130AP0DP74 79 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 SLC2A1P11166 492 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 KDELR2P33947 212 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 RBM34P42696 430 aaKnown RBP2.97□□□□□ -1.93
HMGB1-207ENST00000468384 LGALS7P47929 136 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 GSSP48637 474 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 VBP1P61758 197 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 RHOGP84095 191 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 OR5I1Q13606 314 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 PLGLAQ15195 96 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 LTC4SQ16873 150 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 RGS21Q2M5E4 152 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 CLVS2Q5SYC1 327 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 OR2G6Q5TZ20 316 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 C3orf62Q6ZUJ4 267 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 CMC1Q7Z7K0 106 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 MREGQ8N565 214 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 OR6T1Q8NGN1 323 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 OR6N2Q8NGY6 317 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 SPTSSAQ969W0 71 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 CENPNQ96H22 339 aaPredicted RBP2.97□□□□□ -1.93
HMGB1-207ENST00000468384 TMEM59Q9BXS4 323 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 VCX3AQ9NNX9 186 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 XCL2Q9UBD3 114 aa2.97□□□□□ -1.93
HMGB1-207ENST00000468384 A0A087WYN8 130 aa2.96□□□□□ -1.94
HMGB1-207ENST00000468384 A0A0J9YY99 117 aa2.96□□□□□ -1.94
HMGB1-207ENST00000468384 A0A1B0GWB2 263 aa2.96□□□□□ -1.94
HMGB1-207ENST00000468384 ODAMA1E959 279 aa2.96□□□□□ -1.94
HMGB1-207ENST00000468384 FAM223BA6NKX1 122 aa2.96□□□□□ -1.94
HMGB1-207ENST00000468384 E7ESA3 106 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms