RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 PQLC2Q6ZP29 291 aa13.3□□□□□ -0.28
SLX4-202ENST00000466154 TPSG1Q9NRR2 321 aa13.3□□□□□ -0.28
SLX4-202ENST00000466154 UNQ6494/PRO21346Q6UXR6 183 aa13.3□□□□□ -0.28
SLX4-202ENST00000466154 ZZEF1O43149 2961 aa13.29□□□□□ -0.28
SLX4-202ENST00000466154 TMEM178BH3BS89 294 aa13.29□□□□□ -0.28
SLX4-202ENST00000466154 K7EN84 100 aa13.29□□□□□ -0.28
SLX4-202ENST00000466154 GGCTO75223 188 aaKnown RBP13.29□□□□□ -0.28
SLX4-202ENST00000466154 FRMD6-AS1P0C7T7 363 aa13.29□□□□□ -0.28
SLX4-202ENST00000466154 LINC00869P0C866 280 aa13.29□□□□□ -0.28
SLX4-202ENST00000466154 CNN1P51911 297 aaKnown RBP13.29□□□□□ -0.28
SLX4-202ENST00000466154 LGALS4P56470 323 aa13.29□□□□□ -0.28
SLX4-202ENST00000466154 RAB4BP61018 213 aa13.29□□□□□ -0.28
SLX4-202ENST00000466154 PYGO2Q9BRQ0 406 aa13.29□□□□□ -0.28
SLX4-202ENST00000466154 RALYQ9UKM9 306 aaKnown RBP13.29□□□□□ -0.28
SLX4-202ENST00000466154 RPH3ALQ9UNE2 315 aa13.29□□□□□ -0.28
SLX4-202ENST00000466154 FAM90A27PA6NNH2 459 aa13.29□□□□□ -0.28
SLX4-202ENST00000466154 H0YJW9 148 aa13.29□□□□□ -0.28
SLX4-202ENST00000466154 OR5G3P0C626 314 aa13.29□□□□□ -0.28
SLX4-202ENST00000466154 MORN5Q5VZ52 161 aa13.29□□□□□ -0.28
SLX4-202ENST00000466154 TMEM256Q8N2U0 113 aa13.29□□□□□ -0.28
SLX4-202ENST00000466154 NUP37Q8NFH4 326 aa13.29□□□□□ -0.28
SLX4-202ENST00000466154 LINC01560Q8TB33 94 aa13.29□□□□□ -0.28
SLX4-202ENST00000466154 RITA1Q96K30 269 aa13.29□□□□□ -0.28
SLX4-202ENST00000466154 SLC35E1Q96K37 410 aa13.29□□□□□ -0.28
SLX4-202ENST00000466154 SGK494Q96LW2 274 aa13.29□□□□□ -0.28
SLX4-202ENST00000466154 RNASE7Q9H1E1 156 aaKnown RBP13.29□□□□□ -0.28
SLX4-202ENST00000466154 SVEP1Q4LDE5 3571 aa13.29□□□□□ -0.28
SLX4-202ENST00000466154 HIST1H1BP16401 226 aaKnown RBP13.28□□□□□ -0.28
SLX4-202ENST00000466154 CD33P20138 364 aa13.28□□□□□ -0.28
SLX4-202ENST00000466154 ACTL10Q5JWF8 245 aa13.28□□□□□ -0.28
SLX4-202ENST00000466154 TEX36Q5VZQ5 186 aa13.28□□□□□ -0.28
SLX4-202ENST00000466154 TEX38Q6PEX7 206 aa13.28□□□□□ -0.28
SLX4-202ENST00000466154 Q8NA96 180 aa13.28□□□□□ -0.28
SLX4-202ENST00000466154 NPIPB3Q92617 1050 aa13.28□□□□□ -0.28
SLX4-202ENST00000466154 PRDM13Q9H4Q3 707 aa13.28□□□□□ -0.28
SLX4-202ENST00000466154 CTSZQ9UBR2 303 aa13.28□□□□□ -0.28
SLX4-202ENST00000466154 AKAP6Q13023 2319 aa13.28□□□□□ -0.28
SLX4-202ENST00000466154 HELTA6NFD8 242 aa13.28□□□□□ -0.28
SLX4-202ENST00000466154 GNG4P50150 75 aa13.28□□□□□ -0.28
SLX4-202ENST00000466154 CENPWQ5EE01 88 aa13.28□□□□□ -0.28
SLX4-202ENST00000466154 TMEM144Q7Z5S9 345 aa13.28□□□□□ -0.28
SLX4-202ENST00000466154 CORO2AQ92828 525 aa13.28□□□□□ -0.28
SLX4-202ENST00000466154 SLC45A2Q9UMX9 530 aa13.28□□□□□ -0.28
SLX4-202ENST00000466154 SPTBN1Q01082 2364 aaKnown RBP13.28□□□□□ -0.28
SLX4-202ENST00000466154 ASH1LQ9NR48 2969 aaKnown RBP13.28□□□□□ -0.28
SLX4-202ENST00000466154 VSTM5A8MXK1 200 aa13.28□□□□□ -0.28
SLX4-202ENST00000466154 ITGB1BP1O14713 200 aa13.28□□□□□ -0.28
SLX4-202ENST00000466154 RNASE2P10153 161 aaKnown RBP13.28□□□□□ -0.28
SLX4-202ENST00000466154 PRR20EP86478 221 aa13.28□□□□□ -0.28
SLX4-202ENST00000466154 PRR20CP86479 221 aa13.28□□□□□ -0.28
SLX4-202ENST00000466154 PRR20DP86480 221 aa13.28□□□□□ -0.28
SLX4-202ENST00000466154 PRR20BP86481 221 aa13.28□□□□□ -0.28
SLX4-202ENST00000466154 PRR20AP86496 221 aa13.28□□□□□ -0.28
SLX4-202ENST00000466154 TGIF2LXQ8IUE1 241 aa13.28□□□□□ -0.28
SLX4-202ENST00000466154 OR1L8Q8NGR8 309 aa13.28□□□□□ -0.28
SLX4-202ENST00000466154 MISP3Q96FF7 219 aa13.28□□□□□ -0.28
SLX4-202ENST00000466154 LINC00479Q96M42 142 aa13.28□□□□□ -0.28
SLX4-202ENST00000466154 DCHS2Q6V1P9 2916 aa13.27□□□□□ -0.28
SLX4-202ENST00000466154 PYYP10082 97 aa13.27□□□□□ -0.28
SLX4-202ENST00000466154 PRB4P10163 310 aaPredicted RBP13.27□□□□□ -0.28
SLX4-202ENST00000466154 COX7A1P24310 79 aa13.27□□□□□ -0.28
SLX4-202ENST00000466154 IER3P46695 156 aa13.27□□□□□ -0.28
SLX4-202ENST00000466154 RNASE6Q93091 150 aaKnown RBP13.27□□□□□ -0.28
SLX4-202ENST00000466154 ANKHD1Q8IWZ3 2542 aaKnown RBP13.27□□□□□ -0.29
SLX4-202ENST00000466154 SCGB1D1O95968 90 aa13.27□□□□□ -0.29
SLX4-202ENST00000466154 ATG101Q9BSB4 218 aa13.27□□□□□ -0.29
SLX4-202ENST00000466154 FKBP11Q9NYL4 201 aa13.27□□□□□ -0.29
SLX4-202ENST00000466154 TECRQ9NZ01 308 aaKnown RBP13.27□□□□□ -0.29
SLX4-202ENST00000466154 ORM2P19652 201 aa13.26□□□□□ -0.29
SLX4-202ENST00000466154 ADMP35318 185 aa13.26□□□□□ -0.29
SLX4-202ENST00000466154 UBE2L3P68036 154 aaKnown RBP13.26□□□□□ -0.29
SLX4-202ENST00000466154 OR8I2Q8N0Y5 310 aa13.26□□□□□ -0.29
SLX4-202ENST00000466154 IGFBPL1Q8WX77 278 aa13.26□□□□□ -0.29
SLX4-202ENST00000466154 ZNF430Q9H8G1 570 aaPredicted RBP13.26□□□□□ -0.29
SLX4-202ENST00000466154 ELOVL5Q9NYP7 299 aa13.26□□□□□ -0.29
SLX4-202ENST00000466154 TSTD3H0UI37 97 aa13.26□□□□□ -0.29
SLX4-202ENST00000466154 MOSP00540 346 aa13.26□□□□□ -0.29
SLX4-202ENST00000466154 PRR31Q5SQ13 230 aa13.26□□□□□ -0.29
SLX4-202ENST00000466154 SPACA3Q8IXA5 215 aa13.26□□□□□ -0.29
SLX4-202ENST00000466154 OR5B3Q8NH48 314 aa13.26□□□□□ -0.29
SLX4-202ENST00000466154 E7EQL1 145 aa13.26□□□□□ -0.29
SLX4-202ENST00000466154 H3BTX0 84 aa13.26□□□□□ -0.29
SLX4-202ENST00000466154 COX7A2P2O60397 106 aa13.26□□□□□ -0.29
SLX4-202ENST00000466154 LY6HO94772 140 aa13.26□□□□□ -0.29
SLX4-202ENST00000466154 TDGF1P3P51864 188 aa13.26□□□□□ -0.29
SLX4-202ENST00000466154 WT1-ASQ06250 92 aa13.26□□□□□ -0.29
SLX4-202ENST00000466154 C3orf36Q3SXR2 165 aa13.26□□□□□ -0.29
SLX4-202ENST00000466154 OR5AU1Q8NGC0 362 aa13.26□□□□□ -0.29
SLX4-202ENST00000466154 OR4C13Q8NGP0 309 aa13.26□□□□□ -0.29
SLX4-202ENST00000466154 SCNM1Q9BWG6 230 aa13.26□□□□□ -0.29
SLX4-202ENST00000466154 CA1P00915 261 aaPredicted RBP13.25□□□□□ -0.29
SLX4-202ENST00000466154 GZMBP10144 247 aa13.25□□□□□ -0.29
SLX4-202ENST00000466154 CD69Q07108 199 aa13.25□□□□□ -0.29
SLX4-202ENST00000466154 PRR27Q6MZM9 219 aa13.25□□□□□ -0.29
SLX4-202ENST00000466154 ZNF833PQ6ZTB9 187 aa13.25□□□□□ -0.29
SLX4-202ENST00000466154 OSR1Q8TAX0 266 aaPredicted RBP13.25□□□□□ -0.29
SLX4-202ENST00000466154 BLNKQ8WV28 456 aa13.25□□□□□ -0.29
SLX4-202ENST00000466154 TMEM18Q96B42 140 aa13.25□□□□□ -0.29
SLX4-202ENST00000466154 EAF1Q96JC9 268 aaPredicted RBP13.25□□□□□ -0.29
SLX4-202ENST00000466154 ZNF257Q9Y2Q1 563 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms