RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 NOXA1Q86UR1 476 aa17.34■□□□□ 0.37
C9orf3-209ENST00000460573 UXS1Q8NBZ7 420 aa17.34■□□□□ 0.37
C9orf3-209ENST00000460573 RBKSQ9H477 322 aa17.34■□□□□ 0.37
C9orf3-209ENST00000460573 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.33■□□□□ 0.36
C9orf3-209ENST00000460573 CORTO00230 105 aa17.33■□□□□ 0.36
C9orf3-209ENST00000460573 NXPH3O95157 252 aa17.33■□□□□ 0.36
C9orf3-209ENST00000460573 LY86O95711 162 aa17.33■□□□□ 0.36
C9orf3-209ENST00000460573 RNASE2P10153 161 aaKnown RBP17.33■□□□□ 0.36
C9orf3-209ENST00000460573 ATP5IP56385 69 aaPredicted RBP17.33■□□□□ 0.36
C9orf3-209ENST00000460573 PVRIGQ6DKI7 326 aa17.33■□□□□ 0.36
C9orf3-209ENST00000460573 LINC00482Q8N8I6 264 aa17.33■□□□□ 0.36
C9orf3-209ENST00000460573 WFDC9Q8NEX5 89 aa17.33■□□□□ 0.36
C9orf3-209ENST00000460573 ATP6V0BQ99437 205 aa17.33■□□□□ 0.36
C9orf3-209ENST00000460573 U3KQ87 197 aa17.33■□□□□ 0.36
C9orf3-209ENST00000460573 MPTX1A8MV57 137 aa17.32■□□□□ 0.36
C9orf3-209ENST00000460573 G3V4G9 280 aa17.32■□□□□ 0.36
C9orf3-209ENST00000460573 ZP3P21754 424 aa17.32■□□□□ 0.36
C9orf3-209ENST00000460573 ID3Q02535 119 aa17.32■□□□□ 0.36
C9orf3-209ENST00000460573 IAH1Q2TAA2 248 aaPredicted RBP17.32■□□□□ 0.36
C9orf3-209ENST00000460573 C2orf83Q53S99 150 aa17.32■□□□□ 0.36
C9orf3-209ENST00000460573 OR4D5Q8NGN0 318 aa17.32■□□□□ 0.36
C9orf3-209ENST00000460573 DUX3Q96PT4 197 aa17.32■□□□□ 0.36
C9orf3-209ENST00000460573 CIB3Q96Q77 187 aaPredicted RBP17.32■□□□□ 0.36
C9orf3-209ENST00000460573 CMYA5Q8N3K9 4069 aa17.32■□□□□ 0.36
C9orf3-209ENST00000460573 IGHV4OR15-8A0A075B7B6 117 aa17.31■□□□□ 0.36
C9orf3-209ENST00000460573 A0A087WW49 117 aa17.31■□□□□ 0.36
C9orf3-209ENST00000460573 ANKRD34BA5PLL1 514 aa17.31■□□□□ 0.36
C9orf3-209ENST00000460573 SYNGR2O43760 224 aa17.31■□□□□ 0.36
C9orf3-209ENST00000460573 CD33P20138 364 aa17.31■□□□□ 0.36
C9orf3-209ENST00000460573 SLC24A4Q8NFF2 622 aa17.31■□□□□ 0.36
C9orf3-209ENST00000460573 OR10C1Q96KK4 312 aa17.31■□□□□ 0.36
C9orf3-209ENST00000460573 NOTCH1P46531 2555 aa17.31■□□□□ 0.36
C9orf3-209ENST00000460573 MFSD2BA6NFX1 497 aa17.3■□□□□ 0.36
C9orf3-209ENST00000460573 NKX2-1P43699 371 aaPredicted RBP17.3■□□□□ 0.36
C9orf3-209ENST00000460573 BCAP31P51572 246 aa17.3■□□□□ 0.36
C9orf3-209ENST00000460573 ZBTB8BQ8NAP8 495 aaPredicted RBP17.3■□□□□ 0.36
C9orf3-209ENST00000460573 ZNF502Q8TBZ5 544 aa17.3■□□□□ 0.36
C9orf3-209ENST00000460573 MISP3Q96FF7 219 aa17.3■□□□□ 0.36
C9orf3-209ENST00000460573 VWFP04275 2813 aa17.29■□□□□ 0.36
C9orf3-209ENST00000460573 C5orf51A6NDU8 294 aa17.29■□□□□ 0.36
C9orf3-209ENST00000460573 K7EIM0 57 aa17.29■□□□□ 0.36
C9orf3-209ENST00000460573 GSG1LQ6UXU4 331 aa17.29■□□□□ 0.36
C9orf3-209ENST00000460573 SCARB1Q8WTV0 552 aa17.29■□□□□ 0.36
C9orf3-209ENST00000460573 CCDC140Q96MF4 163 aa17.29■□□□□ 0.36
C9orf3-209ENST00000460573 GAR1Q9NY12 217 aaKnown RBP17.29■□□□□ 0.36
C9orf3-209ENST00000460573 C21orf62Q9NYP8 219 aa17.29■□□□□ 0.36
C9orf3-209ENST00000460573 FAM25EA8MYX2 175 aa17.28■□□□□ 0.36
C9orf3-209ENST00000460573 I3L2K1 104 aa17.28■□□□□ 0.36
C9orf3-209ENST00000460573 WRBO00258 174 aa17.28■□□□□ 0.36
C9orf3-209ENST00000460573 CCSO14618 274 aa17.28■□□□□ 0.36
C9orf3-209ENST00000460573 IFNA10P01566 189 aa17.28■□□□□ 0.36
C9orf3-209ENST00000460573 NPY1RP25929 384 aa17.28■□□□□ 0.36
C9orf3-209ENST00000460573 RPP30P78346 268 aaKnown RBP17.28■□□□□ 0.36
C9orf3-209ENST00000460573 TATDN3Q17R31 274 aa17.28■□□□□ 0.36
C9orf3-209ENST00000460573 RNASEH2CQ8TDP1 164 aaKnown RBP17.28■□□□□ 0.36
C9orf3-209ENST00000460573 CHAC2Q8WUX2 184 aa17.28■□□□□ 0.36
C9orf3-209ENST00000460573 C2orf50Q96LR7 162 aa17.28■□□□□ 0.36
C9orf3-209ENST00000460573 TXN2Q99757 166 aa17.28■□□□□ 0.36
C9orf3-209ENST00000460573 MCRIP2Q9BUT9 160 aaKnown RBP17.28■□□□□ 0.36
C9orf3-209ENST00000460573 GSKIPQ9P0R6 139 aa17.28■□□□□ 0.36
C9orf3-209ENST00000460573 hCG_2014768A0A024R1R8 64 aa17.27■□□□□ 0.36
C9orf3-209ENST00000460573 C7orf66A4D0T2 115 aa17.27■□□□□ 0.36
C9orf3-209ENST00000460573 MT-CO2P00403 227 aa17.27■□□□□ 0.36
C9orf3-209ENST00000460573 CLEC3BP05452 202 aa17.27■□□□□ 0.36
C9orf3-209ENST00000460573 HOXD3P31249 432 aaPredicted RBP17.27■□□□□ 0.36
C9orf3-209ENST00000460573 FCGR2BP31994 310 aaPredicted RBP17.27■□□□□ 0.36
C9orf3-209ENST00000460573 CLEC19AQ6UXS0 136 aa17.27■□□□□ 0.36
C9orf3-209ENST00000460573 PINX1Q96BK5 328 aaKnown RBP17.27■□□□□ 0.36
C9orf3-209ENST00000460573 RCC1LQ96I51 464 aaKnown RBP17.27■□□□□ 0.36
C9orf3-209ENST00000460573 GGCTO75223 188 aaKnown RBP17.26■□□□□ 0.35
C9orf3-209ENST00000460573 TRBV12-3P01733 135 aa17.26■□□□□ 0.35
C9orf3-209ENST00000460573 IGHV3-23P01764 117 aa17.26■□□□□ 0.35
C9orf3-209ENST00000460573 ARL3P36405 182 aa17.26■□□□□ 0.35
C9orf3-209ENST00000460573 RPEL1Q2QD12 228 aa17.26■□□□□ 0.35
C9orf3-209ENST00000460573 BEAN1Q3B7T3 259 aa17.26■□□□□ 0.35
C9orf3-209ENST00000460573 PPP1R14BQ96C90 147 aa17.26■□□□□ 0.35
C9orf3-209ENST00000460573 MAGT1Q9H0U3 335 aa17.26■□□□□ 0.35
C9orf3-209ENST00000460573 S4R3C0 116 aa17.26■□□□□ 0.35
C9orf3-209ENST00000460573 RPS10-NUDT3A0A1W2PQS6 291 aa17.25■□□□□ 0.35
C9orf3-209ENST00000460573 BMPR1BO00238 502 aa17.25■□□□□ 0.35
C9orf3-209ENST00000460573 SSNA1O43805 119 aa17.25■□□□□ 0.35
C9orf3-209ENST00000460573 PFDN1O60925 122 aa17.25■□□□□ 0.35
C9orf3-209ENST00000460573 IAPPP10997 89 aa17.25■□□□□ 0.35
C9orf3-209ENST00000460573 SLURP1P55000 103 aa17.25■□□□□ 0.35
C9orf3-209ENST00000460573 MFAP4P55083 255 aa17.25■□□□□ 0.35
C9orf3-209ENST00000460573 SAMD5Q5TGI4 173 aa17.25■□□□□ 0.35
C9orf3-209ENST00000460573 SPSB3Q6PJ21 355 aa17.25■□□□□ 0.35
C9orf3-209ENST00000460573 REC114Q7Z4M0 266 aa17.25■□□□□ 0.35
C9orf3-209ENST00000460573 DLX4Q92988 240 aaPredicted RBP17.25■□□□□ 0.35
C9orf3-209ENST00000460573 BSCL2Q96G97 398 aaPredicted RBP17.25■□□□□ 0.35
C9orf3-209ENST00000460573 IGHV3-21A0A0B4J1V1 117 aa17.24■□□□□ 0.35
C9orf3-209ENST00000460573 OVOL1O14753 267 aa17.24■□□□□ 0.35
C9orf3-209ENST00000460573 SCGB1D2O95969 90 aa17.24■□□□□ 0.35
C9orf3-209ENST00000460573 OPRK1P41145 380 aa17.24■□□□□ 0.35
C9orf3-209ENST00000460573 POLR2GP62487 172 aaKnown RBP eCLIP17.24■□□□□ 0.35
C9orf3-209ENST00000460573 RAB11AP62491 216 aa17.24■□□□□ 0.35
C9orf3-209ENST00000460573 KLF5Q13887 457 aaPredicted RBP17.24■□□□□ 0.35
C9orf3-209ENST00000460573 ETFRF1Q6IPR1 90 aa17.24■□□□□ 0.35
C9orf3-209ENST00000460573 DCUN1D4Q92564 292 aa17.24■□□□□ 0.35
C9orf3-209ENST00000460573 RAB40CQ96S21 281 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms