RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 GNG4P50150 75 aa11.52□□□□□ -0.57
SCFD1-203ENST00000458591 CCL8P80075 99 aa11.52□□□□□ -0.57
SCFD1-203ENST00000458591 STUMQ69YW2 141 aa11.52□□□□□ -0.57
SCFD1-203ENST00000458591 FAM168AQ92567 244 aa11.52□□□□□ -0.57
SCFD1-203ENST00000458591 FCN3O75636 299 aa11.51□□□□□ -0.57
SCFD1-203ENST00000458591 MGST1P10620 155 aaKnown RBP11.51□□□□□ -0.57
SCFD1-203ENST00000458591 Q0VG73 95 aa11.51□□□□□ -0.57
SCFD1-203ENST00000458591 C10orf55Q5SWW7 151 aa11.51□□□□□ -0.57
SCFD1-203ENST00000458591 MRPL54Q6P161 138 aaKnown RBP11.51□□□□□ -0.57
SCFD1-203ENST00000458591 VN1R17PQ8TDU5 208 aa11.51□□□□□ -0.57
SCFD1-203ENST00000458591 PAM16Q9Y3D7 125 aa11.51□□□□□ -0.57
SCFD1-203ENST00000458591 RAI1Q7Z5J4 1906 aaPredicted RBP11.51□□□□□ -0.57
SCFD1-203ENST00000458591 MBD3L4A6NDZ8 208 aaPredicted RBP11.5□□□□□ -0.57
SCFD1-203ENST00000458591 MBD3L3A6NE82 208 aaPredicted RBP11.5□□□□□ -0.57
SCFD1-203ENST00000458591 MBD3L5A6NJ08 208 aaPredicted RBP11.5□□□□□ -0.57
SCFD1-203ENST00000458591 IGLV2-8P01709 118 aa11.5□□□□□ -0.57
SCFD1-203ENST00000458591 CHRNB4P30926 498 aa11.5□□□□□ -0.57
SCFD1-203ENST00000458591 PRCDQ00LT1 54 aa11.5□□□□□ -0.57
SCFD1-203ENST00000458591 SIGLECL1Q8N7X8 197 aa11.5□□□□□ -0.57
SCFD1-203ENST00000458591 MBD3L2Q8NHZ7 208 aaPredicted RBP11.5□□□□□ -0.57
SCFD1-203ENST00000458591 RCHY1Q96PM5 261 aa11.5□□□□□ -0.57
SCFD1-203ENST00000458591 SSBP3Q9BWW4 388 aaPredicted RBP11.5□□□□□ -0.57
SCFD1-203ENST00000458591 MRPL20Q9BYC9 149 aaKnown RBP11.5□□□□□ -0.57
SCFD1-203ENST00000458591 GNB4Q9HAV0 340 aa11.5□□□□□ -0.57
SCFD1-203ENST00000458591 RUSC1-AS1Q66K80 236 aa11.5□□□□□ -0.57
SCFD1-203ENST00000458591 FAM222BQ8WU58 562 aa11.5□□□□□ -0.57
SCFD1-203ENST00000458591 PPP1R14DQ9NXH3 145 aa11.5□□□□□ -0.57
SCFD1-203ENST00000458591 ZNF586Q9NXT0 402 aa11.5□□□□□ -0.57
SCFD1-203ENST00000458591 BSNQ9UPA5 3926 aa11.5□□□□□ -0.57
SCFD1-203ENST00000458591 ARL2-SNX15V9GYD0 113 aa11.5□□□□□ -0.57
SCFD1-203ENST00000458591 IGLV3-9A0A075B6K5 115 aa11.49□□□□□ -0.57
SCFD1-203ENST00000458591 A6NNC1 897 aa11.49□□□□□ -0.57
SCFD1-203ENST00000458591 DLEU1O43261 78 aa11.49□□□□□ -0.57
SCFD1-203ENST00000458591 MT-ND6P03923 174 aa11.49□□□□□ -0.57
SCFD1-203ENST00000458591 PYYP10082 97 aa11.49□□□□□ -0.57
SCFD1-203ENST00000458591 RNASE2P10153 161 aaKnown RBP11.49□□□□□ -0.57
SCFD1-203ENST00000458591 AREGP15514 252 aa11.49□□□□□ -0.57
SCFD1-203ENST00000458591 BTF3P20290 206 aaKnown RBP11.49□□□□□ -0.57
SCFD1-203ENST00000458591 GAGE1Q13065 139 aa11.49□□□□□ -0.57
SCFD1-203ENST00000458591 TIMM23BQ5SRD1 257 aa11.49□□□□□ -0.57
SCFD1-203ENST00000458591 WDR73Q6P4I2 378 aa11.49□□□□□ -0.57
SCFD1-203ENST00000458591 TMEM208Q9BTX3 173 aa11.49□□□□□ -0.57
SCFD1-203ENST00000458591 GNB1LQ9BYB4 327 aa11.49□□□□□ -0.57
SCFD1-203ENST00000458591 SERTAD4Q9NUC0 356 aa11.49□□□□□ -0.57
SCFD1-203ENST00000458591 NAT8BQ9UHF3 227 aa11.49□□□□□ -0.57
SCFD1-203ENST00000458591 FBXL7Q9UJT9 491 aa11.49□□□□□ -0.57
SCFD1-203ENST00000458591 GOLT1BQ9Y3E0 138 aa11.49□□□□□ -0.57
SCFD1-203ENST00000458591 PLAUP00749 431 aa11.49□□□□□ -0.57
SCFD1-203ENST00000458591 CRYABP02511 175 aaKnown RBP11.49□□□□□ -0.57
SCFD1-203ENST00000458591 IRF2P14316 349 aa11.49□□□□□ -0.57
SCFD1-203ENST00000458591 COMPP49747 757 aaPredicted RBP11.49□□□□□ -0.57
SCFD1-203ENST00000458591 PRB3Q04118 309 aaPredicted RBP11.49□□□□□ -0.57
SCFD1-203ENST00000458591 COX19Q49B96 90 aa11.49□□□□□ -0.57
SCFD1-203ENST00000458591 ZNF788Q6ZQV5 615 aa11.49□□□□□ -0.57
SCFD1-203ENST00000458591 OR4B1Q8NGF8 309 aa11.49□□□□□ -0.57
SCFD1-203ENST00000458591 CORO2AQ92828 525 aa11.49□□□□□ -0.57
SCFD1-203ENST00000458591 SGK494Q96LW2 274 aa11.49□□□□□ -0.57
SCFD1-203ENST00000458591 TRAV34A0A0B4J273 112 aa11.48□□□□□ -0.57
SCFD1-203ENST00000458591 BRS3P32247 399 aa11.48□□□□□ -0.57
SCFD1-203ENST00000458591 CYB5R2Q6BCY4 276 aa11.48□□□□□ -0.57
SCFD1-203ENST00000458591 C19orf35Q6ZS72 473 aa11.48□□□□□ -0.57
SCFD1-203ENST00000458591 SLC25A48Q6ZT89 311 aaKnown RBP11.48□□□□□ -0.57
SCFD1-203ENST00000458591 MRPL36Q9P0J6 103 aaKnown RBP11.48□□□□□ -0.57
SCFD1-203ENST00000458591 IL19Q9UHD0 177 aa11.48□□□□□ -0.57
SCFD1-203ENST00000458591 RPUSD1Q9UJJ7 312 aaKnown RBP11.48□□□□□ -0.57
SCFD1-203ENST00000458591 PRNDQ9UKY0 176 aa11.48□□□□□ -0.57
SCFD1-203ENST00000458591 DSCAML1Q8TD84 2053 aa11.48□□□□□ -0.57
SCFD1-203ENST00000458591 RITA1Q96K30 269 aa11.48□□□□□ -0.57
SCFD1-203ENST00000458591 TECRQ9NZ01 308 aaKnown RBP11.48□□□□□ -0.57
SCFD1-203ENST00000458591 REG1AP05451 166 aa11.47□□□□□ -0.57
SCFD1-203ENST00000458591 DLX1P56177 255 aa11.47□□□□□ -0.57
SCFD1-203ENST00000458591 TMEM136Q6ZRR5 245 aa11.47□□□□□ -0.57
SCFD1-203ENST00000458591 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.47□□□□□ -0.57
SCFD1-203ENST00000458591 SFXN3Q9BWM7 321 aa11.47□□□□□ -0.57
SCFD1-203ENST00000458591 TMEM167BQ9NRX6 74 aa11.47□□□□□ -0.57
SCFD1-203ENST00000458591 SLC25A10Q9UBX3 287 aaPredicted RBP11.47□□□□□ -0.57
SCFD1-203ENST00000458591 ITGB1BP1O14713 200 aa11.47□□□□□ -0.57
SCFD1-203ENST00000458591 APELAP0DMC3 54 aa11.47□□□□□ -0.57
SCFD1-203ENST00000458591 KRTDAPP60985 99 aa11.47□□□□□ -0.57
SCFD1-203ENST00000458591 POU2AF1Q16633 256 aa11.47□□□□□ -0.57
SCFD1-203ENST00000458591 FAM19A2Q8N3H0 131 aa11.47□□□□□ -0.57
SCFD1-203ENST00000458591 HARBI1Q96MB7 349 aa11.47□□□□□ -0.57
SCFD1-203ENST00000458591 SLC25A33Q9BSK2 321 aa11.47□□□□□ -0.57
SCFD1-203ENST00000458591 SLC25A2Q9BXI2 301 aa11.47□□□□□ -0.57
SCFD1-203ENST00000458591 FNDC4Q9H6D8 234 aaPredicted RBP11.47□□□□□ -0.57
SCFD1-203ENST00000458591 OTOGLQ3ZCN5 2332 aa11.46□□□□□ -0.57
SCFD1-203ENST00000458591 CGB1A6NKQ9 187 aa11.46□□□□□ -0.57
SCFD1-203ENST00000458591 PMCHP20382 165 aa11.46□□□□□ -0.57
SCFD1-203ENST00000458591 CD69Q07108 199 aa11.46□□□□□ -0.57
SCFD1-203ENST00000458591 BATFQ16520 125 aa11.46□□□□□ -0.57
SCFD1-203ENST00000458591 OR10J3Q5JRS4 329 aa11.46□□□□□ -0.57
SCFD1-203ENST00000458591 PIP4P1Q86T03 277 aa11.46□□□□□ -0.57
SCFD1-203ENST00000458591 FAM169BQ8N8A8 192 aa11.46□□□□□ -0.57
SCFD1-203ENST00000458591 FAM167A-AS1Q96KT0 104 aa11.46□□□□□ -0.57
SCFD1-203ENST00000458591 IGF2BP2-AS1Q96M15 143 aa11.46□□□□□ -0.57
SCFD1-203ENST00000458591 RNF2Q99496 336 aa11.46□□□□□ -0.57
SCFD1-203ENST00000458591 LPAR2Q9HBW0 351 aa11.46□□□□□ -0.57
SCFD1-203ENST00000458591 GVINP1Q7Z2Y8 2422 aa11.46□□□□□ -0.58
SCFD1-203ENST00000458591 OR5G3P0C626 314 aa11.46□□□□□ -0.58
SCFD1-203ENST00000458591 PRB4P10163 310 aaPredicted RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms