RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 SYT15Q9BQS2 421 aa2.85□□□□□ -1.95
HMGB3P30-201ENST00000457863 Q9H521 79 aa2.85□□□□□ -1.95
HMGB3P30-201ENST00000457863 RERGLQ9H628 205 aa2.85□□□□□ -1.95
HMGB3P30-201ENST00000457863 TUBA4BQ9H853 241 aa2.85□□□□□ -1.95
HMGB3P30-201ENST00000457863 CKLFQ9UBR5 152 aa2.85□□□□□ -1.95
HMGB3P30-201ENST00000457863 CACNG5Q9UF02 275 aa2.85□□□□□ -1.95
HMGB3P30-201ENST00000457863 LRRIQ1Q96JM4 1722 aa2.85□□□□□ -1.95
HMGB3P30-201ENST00000457863 IGHV1-58A0A0C4DH39 117 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 FAM236AA0A1B0GUQ0 79 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 FAM236BA0A1B0GV22 79 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 C7orf71A4D174 169 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 BBIP1A8MTZ0 92 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 FNDC10F2Z333 226 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 M0R378 163 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 LY6G6DO95868 133 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 ZNF705DP0CH99 300 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 RPL22P35268 128 aaKnown RBP2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 LINC01547P58512 204 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 TPPP2P59282 170 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 S100A10P60903 97 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 FGF12P61328 243 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 MYL5Q02045 173 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 DIAPH2-AS1Q14236 149 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 PDGFRLQ15198 375 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 PYY3Q5JQD4 70 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 MEIG1Q5JSS6 88 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 SPANXN3Q5MJ09 141 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 GUSBP11Q6P575 273 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 LYPD2Q6UXB3 125 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 FER1L6-AS1Q8NA97 138 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 C5orf17Q8NAS9 161 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 PLPP5Q8NEB5 264 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 OR5H2Q8NGV7 314 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 C15orf40Q8WUR7 153 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 LCN9Q8WX39 176 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 PYGO2Q9BRQ0 406 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 TCEAL2Q9H3H9 227 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 BANF2Q9H503 90 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 SND1-IT1Q9HBX3 110 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 RPRMQ9NS64 109 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 CCDC167Q9P0B6 97 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 MDFICQ9P1T7 246 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 FUT9Q9Y231 359 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 RNF11Q9Y3C5 154 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 IER3IP1Q9Y5U9 82 aa2.84□□□□□ -1.95
HMGB3P30-201ENST00000457863 KTN1Q86UP2 1357 aaKnown RBP2.84□□□□□ -1.96
HMGB3P30-201ENST00000457863 GON4LQ3T8J9 2241 aa2.84□□□□□ -1.96
HMGB3P30-201ENST00000457863 TCF20Q9UGU0 1960 aaKnown RBP2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 ABCA3Q99758 1704 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 IGKV1-6A0A0C4DH72 117 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 A0A0G2JMM0 328 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 A0A0J9YXY3 114 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 A0A1W2PPB8 328 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 ZNF860A6NHJ4 632 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 KIR3DP1A8MWS1 328 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 OR2T1O43869 369 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 KRASP01116 189 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 IGKV1-39P01597 117 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 IGLV2-23P01705 113 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 IGHV3-23P01764 117 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 IGKV1D-39P04432 117 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 CD7P09564 240 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 SEC11BP0C7V7 166 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 HIST1H2BOP23527 126 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 HIST1H2BBP33778 126 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 ZNF80P51504 273 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 FOXA3P55318 350 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 HIST1H2BDP58876 126 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 HIST1H2BCP62807 126 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 QRFPP83859 136 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 HIST2H2BEQ16778 126 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 TMEM183BQ1AE95 376 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 MPV17L2Q567V2 206 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 C9orf57Q5W0N0 161 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 FOXI2Q6ZQN5 318 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 TRAPPC6BQ86SZ2 158 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 ZNF329Q86UD4 541 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 NR2C2APQ86WQ0 139 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 RPS19BP1Q86WX3 136 aaKnown RBP2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 SAXO1Q8IYX7 474 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 C10orf126Q8N4M7 172 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 SLC25A29Q8N8R3 303 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 Q8NBF4 154 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 OR5C1Q8NGR4 320 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 BRK1Q8WUW1 75 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 NAT14Q8WUY8 206 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 HIST1H2BHQ93079 126 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 SLC25A46Q96AG3 418 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 VSIG2Q96IQ7 327 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 HIST1H2BNQ99877 126 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 HIST1H2BMQ99879 126 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 SNRNP25Q9BV90 132 aaKnown RBP2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 MRPL32Q9BYC8 188 aaKnown RBP2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 TAS2R8Q9NYW2 309 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 MARCOQ9UEW3 520 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 MPC1Q9Y5U8 109 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 EML6Q6ZMW3 1958 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 SCAPERQ9BY12 1400 aa2.83□□□□□ -1.96
HMGB3P30-201ENST00000457863 TET2Q6N021 2002 aaPredicted RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms