RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 PAFAH1B2P68402 229 aa8.65□□□□□ -1.02
GTF3C2-206ENST00000454704 GAMTQ14353 236 aa8.65□□□□□ -1.02
GTF3C2-206ENST00000454704 LTC4SQ16873 150 aa8.65□□□□□ -1.02
GTF3C2-206ENST00000454704 SPINK9Q5DT21 86 aa8.65□□□□□ -1.02
GTF3C2-206ENST00000454704 TEX38Q6PEX7 206 aa8.65□□□□□ -1.02
GTF3C2-206ENST00000454704 LINC00469Q8N7U9 141 aa8.65□□□□□ -1.02
GTF3C2-206ENST00000454704 ZNRF1Q8ND25 227 aa8.65□□□□□ -1.02
GTF3C2-206ENST00000454704 VSTM2AQ8TAG5 236 aa8.65□□□□□ -1.02
GTF3C2-206ENST00000454704 GAFA1Q96PS6 74 aa8.65□□□□□ -1.02
GTF3C2-206ENST00000454704 ELOVL1Q9BW60 279 aa8.65□□□□□ -1.02
GTF3C2-206ENST00000454704 SLC35D1Q9NTN3 355 aa8.65□□□□□ -1.02
GTF3C2-206ENST00000454704 ELOVL5Q9NYP7 299 aa8.65□□□□□ -1.02
GTF3C2-206ENST00000454704 DSCAMO60469 2012 aa8.65□□□□□ -1.03
GTF3C2-206ENST00000454704 A0A1W2PN81 502 aa8.64□□□□□ -1.03
GTF3C2-206ENST00000454704 FAM90A27PA6NNH2 459 aa8.64□□□□□ -1.03
GTF3C2-206ENST00000454704 VSTM5A8MXK1 200 aa8.64□□□□□ -1.03
GTF3C2-206ENST00000454704 J3QR06 171 aa8.64□□□□□ -1.03
GTF3C2-206ENST00000454704 SPRY3O43610 288 aa8.64□□□□□ -1.03
GTF3C2-206ENST00000454704 CA2P00918 260 aa8.64□□□□□ -1.03
GTF3C2-206ENST00000454704 IGHV1-46P01743 117 aa8.64□□□□□ -1.03
GTF3C2-206ENST00000454704 ESDP10768 282 aa8.64□□□□□ -1.03
GTF3C2-206ENST00000454704 CHRNA7P36544 502 aa8.64□□□□□ -1.03
GTF3C2-206ENST00000454704 UBE2G2P60604 165 aa8.64□□□□□ -1.03
GTF3C2-206ENST00000454704 SSTP61278 116 aa8.64□□□□□ -1.03
GTF3C2-206ENST00000454704 PDZD11Q5EBL8 140 aa8.64□□□□□ -1.03
GTF3C2-206ENST00000454704 ARSJQ5FYB0 599 aaPredicted RBP8.64□□□□□ -1.03
GTF3C2-206ENST00000454704 WDR73Q6P4I2 378 aa8.64□□□□□ -1.03
GTF3C2-206ENST00000454704 ZNF474Q6S9Z5 364 aaPredicted RBP8.64□□□□□ -1.03
GTF3C2-206ENST00000454704 ZNF833PQ6ZTB9 187 aa8.64□□□□□ -1.03
GTF3C2-206ENST00000454704 LRP11Q86VZ4 500 aa8.64□□□□□ -1.03
GTF3C2-206ENST00000454704 MRPL41Q8IXM3 137 aaKnown RBP8.64□□□□□ -1.03
GTF3C2-206ENST00000454704 LYG1Q8N1E2 194 aa8.64□□□□□ -1.03
GTF3C2-206ENST00000454704 ABHD12Q8N2K0 398 aa8.64□□□□□ -1.03
GTF3C2-206ENST00000454704 GBGT1Q8N5D6 347 aa8.64□□□□□ -1.03
GTF3C2-206ENST00000454704 PATZ1Q9HBE1 687 aaKnown RBP8.64□□□□□ -1.03
GTF3C2-206ENST00000454704 GCM1Q9NP62 436 aa8.64□□□□□ -1.03
GTF3C2-206ENST00000454704 ACANP16112 2415 aa8.64□□□□□ -1.03
GTF3C2-206ENST00000454704 IGHV3OR15-7A0A075B7D8 119 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 A0A1W2PRE2 83 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 SLC31A2O15432 143 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 TFF1P04155 84 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 OR5G3P0C626 314 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 GZMBP10144 247 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 IGFBP2P18065 325 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 USF1P22415 310 aaPredicted RBP8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 MSMPQ1L6U9 139 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 TMEM177Q53S58 311 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 TMEM108Q6UXF1 575 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 MRPL52Q86TS9 123 aaKnown RBP8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 LINC00311Q8N616 119 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 SGMS2Q8NHU3 365 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 FAM57AQ8TBR7 257 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 ZNF596Q8TC21 504 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 OSTCQ9NRP0 149 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 FAM215AQ9Y5M1 114 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 ANKHD1Q8IWZ3 2542 aaKnown RBP8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 MAP1AP78559 2803 aaPredicted RBP8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 DYSFO75923 2080 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 DNHD1Q96M86 4753 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 A0A087X0M5 115 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 TRAV3A0A0B4J244 114 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 A0A1B0GX30 115 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 SCO2A0A1W2PP80 73 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 CD40P25942 277 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 SUB1P53999 127 aaKnown RBP eCLIP8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 LINC00205P59089 165 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 RPS16P62249 146 aaKnown RBP8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 RANP62826 216 aaKnown RBP8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 RPL31P62899 125 aaKnown RBP8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 ERHP84090 104 aaKnown RBP8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 CD69Q07108 199 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 RPEL1Q2QD12 228 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 KRTAP21-3Q3LHN1 58 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 GCSAMLQ5JQS6 135 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 C9orf152Q5JTZ5 239 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 PDPNQ86YL7 162 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 RPRMLQ8N4K4 120 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 TMEM37Q8WXS4 190 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 NRGNQ92686 78 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 C1orf159Q96HA4 380 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 EAF1Q96JC9 268 aaPredicted RBP8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 ZNF714Q96N38 554 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 NABP2Q9BQ15 211 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 CHRDL1Q9BU40 450 aa8.63□□□□□ -1.03
GTF3C2-206ENST00000454704 ABCA4P78363 2273 aa8.62□□□□□ -1.03
GTF3C2-206ENST00000454704 PRRC2AP48634 2157 aaKnown RBP8.62□□□□□ -1.03
GTF3C2-206ENST00000454704 NIPBLQ6KC79 2804 aaeCLIP8.62□□□□□ -1.03
GTF3C2-206ENST00000454704 LINC00869P0C866 280 aa8.62□□□□□ -1.03
GTF3C2-206ENST00000454704 CHRNB4P30926 498 aa8.62□□□□□ -1.03
GTF3C2-206ENST00000454704 TAS2R60P59551 318 aa8.62□□□□□ -1.03
GTF3C2-206ENST00000454704 RAB4BP61018 213 aa8.62□□□□□ -1.03
GTF3C2-206ENST00000454704 ZNF90Q03938 601 aa8.62□□□□□ -1.03
GTF3C2-206ENST00000454704 TCF23Q7RTU1 214 aa8.62□□□□□ -1.03
GTF3C2-206ENST00000454704 OR1L4Q8NGR5 311 aa8.62□□□□□ -1.03
GTF3C2-206ENST00000454704 OCC1Q8TAD7 63 aa8.62□□□□□ -1.03
GTF3C2-206ENST00000454704 TMEM167AQ8TBQ9 72 aa8.62□□□□□ -1.03
GTF3C2-206ENST00000454704 TMEM186Q96B77 213 aa8.62□□□□□ -1.03
GTF3C2-206ENST00000454704 C14orf144Q96I85 54 aa8.62□□□□□ -1.03
GTF3C2-206ENST00000454704 NDUFAF3Q9BU61 184 aa8.62□□□□□ -1.03
GTF3C2-206ENST00000454704 GNB1LQ9BYB4 327 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms