RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 CTSGP08311 255 aa12.79□□□□□ -0.36
TNFRSF4-202ENST00000453580 ALDH3B2P48448 385 aa12.79□□□□□ -0.36
TNFRSF4-202ENST00000453580 PPP5CP53041 499 aa12.79□□□□□ -0.36
TNFRSF4-202ENST00000453580 APOC4P55056 127 aa12.79□□□□□ -0.36
TNFRSF4-202ENST00000453580 TMBIM6P55061 237 aa12.79□□□□□ -0.36
TNFRSF4-202ENST00000453580 DUSP18Q8NEJ0 188 aa12.79□□□□□ -0.36
TNFRSF4-202ENST00000453580 GINS3Q9BRX5 216 aa12.79□□□□□ -0.36
TNFRSF4-202ENST00000453580 CHRDL1Q9BU40 450 aa12.79□□□□□ -0.36
TNFRSF4-202ENST00000453580 C6orf62Q9GZU0 229 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF4-202ENST00000453580 IGHV3-21A0A0B4J1V1 117 aa12.78□□□□□ -0.36
TNFRSF4-202ENST00000453580 I3L2K1 104 aa12.78□□□□□ -0.36
TNFRSF4-202ENST00000453580 CTDSPLO15194 276 aa12.78□□□□□ -0.36
TNFRSF4-202ENST00000453580 MT-CO2P00403 227 aa12.78□□□□□ -0.36
TNFRSF4-202ENST00000453580 ADMP35318 185 aa12.78□□□□□ -0.36
TNFRSF4-202ENST00000453580 SMIM4Q8WVI0 70 aa12.78□□□□□ -0.36
TNFRSF4-202ENST00000453580 SCGB3A2Q96PL1 93 aa12.78□□□□□ -0.36
TNFRSF4-202ENST00000453580 TP53RKQ96S44 253 aa12.78□□□□□ -0.36
TNFRSF4-202ENST00000453580 CCDC59Q9P031 241 aaKnown RBP12.78□□□□□ -0.36
TNFRSF4-202ENST00000453580 F8W735 103 aaPredicted RBP12.77□□□□□ -0.37
TNFRSF4-202ENST00000453580 UBE2CO00762 179 aa12.77□□□□□ -0.37
TNFRSF4-202ENST00000453580 YIF1AO95070 293 aa12.77□□□□□ -0.37
TNFRSF4-202ENST00000453580 PI3P19957 117 aa12.77□□□□□ -0.37
TNFRSF4-202ENST00000453580 UCP1P25874 307 aa12.77□□□□□ -0.37
TNFRSF4-202ENST00000453580 DHODHQ02127 395 aa12.77□□□□□ -0.37
TNFRSF4-202ENST00000453580 IL18Q14116 193 aa12.77□□□□□ -0.37
TNFRSF4-202ENST00000453580 ZFAND6Q6FIF0 208 aa12.77□□□□□ -0.37
TNFRSF4-202ENST00000453580 CLVS1Q8IUQ0 354 aaPredicted RBP12.77□□□□□ -0.37
TNFRSF4-202ENST00000453580 TMEM116Q8NCL8 245 aa12.77□□□□□ -0.37
TNFRSF4-202ENST00000453580 OR13C8Q8NGS7 320 aa12.77□□□□□ -0.37
TNFRSF4-202ENST00000453580 PINX1Q96BK5 328 aaKnown RBP12.77□□□□□ -0.37
TNFRSF4-202ENST00000453580 DIRAS2Q96HU8 199 aa12.77□□□□□ -0.37
TNFRSF4-202ENST00000453580 PRRT1Q99946 306 aa12.77□□□□□ -0.37
TNFRSF4-202ENST00000453580 NXF2Q9GZY0 626 aaKnown RBP12.77□□□□□ -0.37
TNFRSF4-202ENST00000453580 WFDC10AQ9H1F0 79 aa12.77□□□□□ -0.37
TNFRSF4-202ENST00000453580 SMPXQ9UHP9 88 aa12.77□□□□□ -0.37
TNFRSF4-202ENST00000453580 TRAV14DV4A0A0A6YYC5 116 aa12.76□□□□□ -0.37
TNFRSF4-202ENST00000453580 PIGBOS1A0A0B4J2F0 54 aa12.76□□□□□ -0.37
TNFRSF4-202ENST00000453580 IGHV7-4-1A0A0J9YVY3 117 aa12.76□□□□□ -0.37
TNFRSF4-202ENST00000453580 TEX13DA0A0J9YY54 714 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF4-202ENST00000453580 AKAIN1P0CW23 69 aa12.76□□□□□ -0.37
TNFRSF4-202ENST00000453580 HOXA1P49639 335 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF4-202ENST00000453580 PAFAH1B2P68402 229 aa12.76□□□□□ -0.37
TNFRSF4-202ENST00000453580 MARCH1Q8TCQ1 289 aa12.76□□□□□ -0.37
TNFRSF4-202ENST00000453580 OR10C1Q96KK4 312 aa12.76□□□□□ -0.37
TNFRSF4-202ENST00000453580 TMEM222Q9H0R3 208 aa12.76□□□□□ -0.37
TNFRSF4-202ENST00000453580 RSL24D1Q9UHA3 163 aaKnown RBP12.76□□□□□ -0.37
TNFRSF4-202ENST00000453580 TP53TG1Q9Y2A0 90 aa12.76□□□□□ -0.37
TNFRSF4-202ENST00000453580 KIR2DL5BA0A0G2JN68 375 aa12.75□□□□□ -0.37
TNFRSF4-202ENST00000453580 KIR2DL5BA0A0G2JPC4 375 aa12.75□□□□□ -0.37
TNFRSF4-202ENST00000453580 CTDSP2O14595 271 aa12.75□□□□□ -0.37
TNFRSF4-202ENST00000453580 ST8SIA3O43173 380 aa12.75□□□□□ -0.37
TNFRSF4-202ENST00000453580 IGKV1-5P01602 117 aa12.75□□□□□ -0.37
TNFRSF4-202ENST00000453580 P0C879 139 aa12.75□□□□□ -0.37
TNFRSF4-202ENST00000453580 SPCS2Q15005 226 aa12.75□□□□□ -0.37
TNFRSF4-202ENST00000453580 Q6ZWC4 215 aa12.75□□□□□ -0.37
TNFRSF4-202ENST00000453580 KIR2DL5AQ8N109 375 aa12.75□□□□□ -0.37
TNFRSF4-202ENST00000453580 KIR2DL5BQ8NHK3 375 aa12.75□□□□□ -0.37
TNFRSF4-202ENST00000453580 RHPN1-AS1Q9BWJ2 59 aa12.75□□□□□ -0.37
TNFRSF4-202ENST00000453580 MIXL1Q9H2W2 232 aa12.75□□□□□ -0.37
TNFRSF4-202ENST00000453580 TMEM231Q9H6L2 316 aa12.75□□□□□ -0.37
TNFRSF4-202ENST00000453580 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.75□□□□□ -0.37
TNFRSF4-202ENST00000453580 SCP2D1Q9UJQ7 156 aa12.75□□□□□ -0.37
TNFRSF4-202ENST00000453580 A0A0B4J293 547 aa12.74□□□□□ -0.37
TNFRSF4-202ENST00000453580 LCE6AA0A183 80 aa12.74□□□□□ -0.37
TNFRSF4-202ENST00000453580 CDS2O95674 445 aa12.74□□□□□ -0.37
TNFRSF4-202ENST00000453580 SPCS3P61009 180 aa12.74□□□□□ -0.37
TNFRSF4-202ENST00000453580 STPG3Q8N7X2 389 aa12.74□□□□□ -0.37
TNFRSF4-202ENST00000453580 OR4D10Q8NGI6 311 aa12.74□□□□□ -0.37
TNFRSF4-202ENST00000453580 OR52E5Q8NH55 327 aa12.74□□□□□ -0.37
TNFRSF4-202ENST00000453580 RBPMSQ93062 196 aaKnown RBP12.74□□□□□ -0.37
TNFRSF4-202ENST00000453580 GALNT14Q96FL9 552 aa12.74□□□□□ -0.37
TNFRSF4-202ENST00000453580 RETNQ9HD89 108 aa12.74□□□□□ -0.37
TNFRSF4-202ENST00000453580 KCNIP3Q9Y2W7 256 aa12.74□□□□□ -0.37
TNFRSF4-202ENST00000453580 SELENOKQ9Y6D0 94 aa12.74□□□□□ -0.37
TNFRSF4-202ENST00000453580 TRAV30A0A087WSZ9 112 aa12.73□□□□□ -0.37
TNFRSF4-202ENST00000453580 RPS10-NUDT3A0A1W2PQS6 291 aa12.73□□□□□ -0.37
TNFRSF4-202ENST00000453580 CHEK1O14757 476 aa12.73□□□□□ -0.37
TNFRSF4-202ENST00000453580 JTBO76095 146 aa12.73□□□□□ -0.37
TNFRSF4-202ENST00000453580 RPL5P46777 297 aaKnown RBP12.73□□□□□ -0.37
TNFRSF4-202ENST00000453580 SP6Q3SY56 376 aa12.73□□□□□ -0.37
TNFRSF4-202ENST00000453580 ZNF600Q6ZNG1 722 aa12.73□□□□□ -0.37
TNFRSF4-202ENST00000453580 NOXA1Q86UR1 476 aa12.73□□□□□ -0.37
TNFRSF4-202ENST00000453580 DYNC2LI1Q8TCX1 351 aa12.73□□□□□ -0.37
TNFRSF4-202ENST00000453580 NAA60Q9H7X0 242 aa12.73□□□□□ -0.37
TNFRSF4-202ENST00000453580 HUWE1Q7Z6Z7 4374 aaKnown RBP12.72□□□□□ -0.37
TNFRSF4-202ENST00000453580 A0A1W2PS18 150 aa12.72□□□□□ -0.37
TNFRSF4-202ENST00000453580 ZNF207O43670 478 aaKnown RBP12.72□□□□□ -0.37
TNFRSF4-202ENST00000453580 GSTZ1O43708 216 aaPredicted RBP12.72□□□□□ -0.37
TNFRSF4-202ENST00000453580 ETV6P41212 452 aa12.72□□□□□ -0.37
TNFRSF4-202ENST00000453580 HTR2BP41595 481 aa12.72□□□□□ -0.37
TNFRSF4-202ENST00000453580 PVRIGQ6DKI7 326 aa12.72□□□□□ -0.37
TNFRSF4-202ENST00000453580 WFDC3Q8IUB2 231 aa12.72□□□□□ -0.37
TNFRSF4-202ENST00000453580 NARS2Q96I59 477 aaKnown RBP12.72□□□□□ -0.37
TNFRSF4-202ENST00000453580 IGHV3OR16-8A0A075B7F1 116 aa12.71□□□□□ -0.37
TNFRSF4-202ENST00000453580 OR5AC1P0C628 307 aa12.71□□□□□ -0.37
TNFRSF4-202ENST00000453580 FAUP35544 74 aaKnown RBP12.71□□□□□ -0.37
TNFRSF4-202ENST00000453580 OPRK1P41145 380 aa12.71□□□□□ -0.37
TNFRSF4-202ENST00000453580 IZUMO4Q1ZYL8 232 aa12.71□□□□□ -0.37
TNFRSF4-202ENST00000453580 AARDQ4LEZ3 155 aa12.71□□□□□ -0.37
TNFRSF4-202ENST00000453580 SPINK9Q5DT21 86 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms