RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 CEBPZOSA8MTT3 80 aa6.76□□□□□ -1.33
COL28A1-205ENST00000453441 PITX3O75364 302 aa6.76□□□□□ -1.33
COL28A1-205ENST00000453441 HOXB5P09067 269 aa6.76□□□□□ -1.33
COL28A1-205ENST00000453441 MYOD1P15172 320 aa6.76□□□□□ -1.33
COL28A1-205ENST00000453441 HTR2BP41595 481 aa6.76□□□□□ -1.33
COL28A1-205ENST00000453441 RHOGP84095 191 aa6.76□□□□□ -1.33
COL28A1-205ENST00000453441 TNFRSF9Q07011 255 aa6.76□□□□□ -1.33
COL28A1-205ENST00000453441 KIAA0141Q14154 515 aaPredicted RBP6.76□□□□□ -1.33
COL28A1-205ENST00000453441 NSUN5P1Q3KNT7 163 aa6.76□□□□□ -1.33
COL28A1-205ENST00000453441 GGNBP1Q5YKI7 109 aa6.76□□□□□ -1.33
COL28A1-205ENST00000453441 Q6ZRM9 215 aa6.76□□□□□ -1.33
COL28A1-205ENST00000453441 OR10W1Q8NGF6 305 aa6.76□□□□□ -1.33
COL28A1-205ENST00000453441 VN1R17PQ8TDU5 208 aa6.76□□□□□ -1.33
COL28A1-205ENST00000453441 KLK15Q9H2R5 256 aa6.76□□□□□ -1.33
COL28A1-205ENST00000453441 HEYLQ9NQ87 328 aaPredicted RBP6.76□□□□□ -1.33
COL28A1-205ENST00000453441 TRBV7-1A0A0A6YYK4 115 aa6.75□□□□□ -1.33
COL28A1-205ENST00000453441 A0A1W2PRX2 142 aa6.75□□□□□ -1.33
COL28A1-205ENST00000453441 I3L521 148 aa6.75□□□□□ -1.33
COL28A1-205ENST00000453441 HSPB1P04792 205 aaKnown RBP6.75□□□□□ -1.33
COL28A1-205ENST00000453441 OR8U8P0C7N1 319 aa6.75□□□□□ -1.33
COL28A1-205ENST00000453441 APELAP0DMC3 54 aa6.75□□□□□ -1.33
COL28A1-205ENST00000453441 MED14OSP0DP75 135 aa6.75□□□□□ -1.33
COL28A1-205ENST00000453441 ATF4P18848 351 aaPredicted RBP6.75□□□□□ -1.33
COL28A1-205ENST00000453441 ZP3P21754 424 aa6.75□□□□□ -1.33
COL28A1-205ENST00000453441 RPP30P78346 268 aaKnown RBP6.75□□□□□ -1.33
COL28A1-205ENST00000453441 EXOSC2Q13868 293 aaKnown RBP6.75□□□□□ -1.33
COL28A1-205ENST00000453441 IZUMO4Q1ZYL8 232 aa6.75□□□□□ -1.33
COL28A1-205ENST00000453441 C15orf32Q32M92 178 aa6.75□□□□□ -1.33
COL28A1-205ENST00000453441 BSXQ3C1V8 233 aa6.75□□□□□ -1.33
COL28A1-205ENST00000453441 KRTAP19-4Q3LI73 84 aa6.75□□□□□ -1.33
COL28A1-205ENST00000453441 PVRIGQ6DKI7 326 aa6.75□□□□□ -1.33
COL28A1-205ENST00000453441 ZNF343Q6P1L6 599 aa6.75□□□□□ -1.33
COL28A1-205ENST00000453441 DPF1Q92782 380 aa6.75□□□□□ -1.33
COL28A1-205ENST00000453441 EEF1AKMT3Q96AZ1 226 aa6.75□□□□□ -1.33
COL28A1-205ENST00000453441 MS4A10Q96PG2 267 aa6.75□□□□□ -1.33
COL28A1-205ENST00000453441 P2RX4Q99571 388 aa6.75□□□□□ -1.33
COL28A1-205ENST00000453441 SEC22CQ9BRL7 303 aa6.75□□□□□ -1.33
COL28A1-205ENST00000453441 GPR61Q9BZJ8 451 aa6.75□□□□□ -1.33
COL28A1-205ENST00000453441 RANGRFQ9HD47 186 aaPredicted RBP6.75□□□□□ -1.33
COL28A1-205ENST00000453441 AP5S1Q9NUS5 200 aa6.75□□□□□ -1.33
COL28A1-205ENST00000453441 FBXL7Q9UJT9 491 aa6.75□□□□□ -1.33
COL28A1-205ENST00000453441 U3KQ87 197 aa6.75□□□□□ -1.33
COL28A1-205ENST00000453441 RPS10-NUDT3A0A1W2PQS6 291 aa6.74□□□□□ -1.33
COL28A1-205ENST00000453441 C7orf66A4D0T2 115 aa6.74□□□□□ -1.33
COL28A1-205ENST00000453441 CCL24O00175 119 aa6.74□□□□□ -1.33
COL28A1-205ENST00000453441 WRBO00258 174 aa6.74□□□□□ -1.33
COL28A1-205ENST00000453441 SCGB2A1O75556 95 aa6.74□□□□□ -1.33
COL28A1-205ENST00000453441 ADAP1O75689 374 aa6.74□□□□□ -1.33
COL28A1-205ENST00000453441 OR2J3O76001 311 aa6.74□□□□□ -1.33
COL28A1-205ENST00000453441 SCAF4O95104 1147 aaKnown RBP6.74□□□□□ -1.33
COL28A1-205ENST00000453441 REG1AP05451 166 aa6.74□□□□□ -1.33
COL28A1-205ENST00000453441 FCGR2BP31994 310 aaPredicted RBP6.74□□□□□ -1.33
COL28A1-205ENST00000453441 NKX2-1P43699 371 aaPredicted RBP6.74□□□□□ -1.33
COL28A1-205ENST00000453441 CYCSP99999 105 aaKnown RBP6.74□□□□□ -1.33
COL28A1-205ENST00000453441 ZNF616Q08AN1 781 aa6.74□□□□□ -1.33
COL28A1-205ENST00000453441 FHL3Q13643 280 aa6.74□□□□□ -1.33
COL28A1-205ENST00000453441 IAH1Q2TAA2 248 aaPredicted RBP6.74□□□□□ -1.33
COL28A1-205ENST00000453441 C2orf83Q53S99 150 aa6.74□□□□□ -1.33
COL28A1-205ENST00000453441 SLC25A24Q6NUK1 477 aa6.74□□□□□ -1.33
COL28A1-205ENST00000453441 GSG1LQ6UXU4 331 aa6.74□□□□□ -1.33
COL28A1-205ENST00000453441 SLC24A4Q8NFF2 622 aa6.74□□□□□ -1.33
COL28A1-205ENST00000453441 OR52B4Q8NGK2 314 aa6.74□□□□□ -1.33
COL28A1-205ENST00000453441 OR1N2Q8NGR9 330 aa6.74□□□□□ -1.33
COL28A1-205ENST00000453441 RNASEH2CQ8TDP1 164 aaKnown RBP6.74□□□□□ -1.33
COL28A1-205ENST00000453441 DTD1Q8TEA8 209 aa6.74□□□□□ -1.33
COL28A1-205ENST00000453441 TXN2Q99757 166 aa6.74□□□□□ -1.33
COL28A1-205ENST00000453441 MCRIP2Q9BUT9 160 aaKnown RBP6.74□□□□□ -1.33
COL28A1-205ENST00000453441 GNB4Q9HAV0 340 aa6.74□□□□□ -1.33
COL28A1-205ENST00000453441 PEF1Q9UBV8 284 aaKnown RBP6.74□□□□□ -1.33
COL28A1-205ENST00000453441 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.73□□□□□ -1.33
COL28A1-205ENST00000453441 LINC01619G3V211 115 aa6.73□□□□□ -1.33
COL28A1-205ENST00000453441 SYNGR2O43760 224 aa6.73□□□□□ -1.33
COL28A1-205ENST00000453441 PRH1P02810 166 aa6.73□□□□□ -1.33
COL28A1-205ENST00000453441 RNASE2P10153 161 aaKnown RBP6.73□□□□□ -1.33
COL28A1-205ENST00000453441 NPY1RP25929 384 aa6.73□□□□□ -1.33
COL28A1-205ENST00000453441 TATDN3Q17R31 274 aa6.73□□□□□ -1.33
COL28A1-205ENST00000453441 ETFRF1Q6IPR1 90 aa6.73□□□□□ -1.33
COL28A1-205ENST00000453441 SPSB3Q6PJ21 355 aa6.73□□□□□ -1.33
COL28A1-205ENST00000453441 LCNL1Q6ZST4 164 aa6.73□□□□□ -1.33
COL28A1-205ENST00000453441 ZBTB8BQ8NAP8 495 aaPredicted RBP6.73□□□□□ -1.33
COL28A1-205ENST00000453441 UXS1Q8NBZ7 420 aa6.73□□□□□ -1.33
COL28A1-205ENST00000453441 OR4D5Q8NGN0 318 aa6.73□□□□□ -1.33
COL28A1-205ENST00000453441 RAX2Q96IS3 184 aa6.73□□□□□ -1.33
COL28A1-205ENST00000453441 C2orf50Q96LR7 162 aa6.73□□□□□ -1.33
COL28A1-205ENST00000453441 RAB40CQ96S21 281 aa6.73□□□□□ -1.33
COL28A1-205ENST00000453441 RBKSQ9H477 322 aa6.73□□□□□ -1.33
COL28A1-205ENST00000453441 MGAM2Q2M2H8 2515 aa6.73□□□□□ -1.33
COL28A1-205ENST00000453441 C5orf51A6NDU8 294 aa6.72□□□□□ -1.33
COL28A1-205ENST00000453441 SSNA1O43805 119 aa6.72□□□□□ -1.33
COL28A1-205ENST00000453441 NDUFB8O95169 186 aa6.72□□□□□ -1.33
COL28A1-205ENST00000453441 IFNA10P01566 189 aa6.72□□□□□ -1.33
COL28A1-205ENST00000453441 IGHV3-11P01762 117 aa6.72□□□□□ -1.33
COL28A1-205ENST00000453441 SLC25A4P12235 298 aa6.72□□□□□ -1.33
COL28A1-205ENST00000453441 MFAP4P55083 255 aa6.72□□□□□ -1.33
COL28A1-205ENST00000453441 TAS2R30P59541 319 aa6.72□□□□□ -1.33
COL28A1-205ENST00000453441 RAB11AP62491 216 aa6.72□□□□□ -1.33
COL28A1-205ENST00000453441 OXA1LQ15070 435 aa6.72□□□□□ -1.33
COL28A1-205ENST00000453441 SPINK9Q5DT21 86 aa6.72□□□□□ -1.33
COL28A1-205ENST00000453441 ETV3LQ6ZN32 361 aa6.72□□□□□ -1.33
COL28A1-205ENST00000453441 LINC00482Q8N8I6 264 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms