RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 NHP2Q9NX24 153 aaKnown RBP6.42□□□□□ -1.38
RIF1-206ENST00000453091 SEMA5BQ9P283 1151 aa6.42□□□□□ -1.38
RIF1-206ENST00000453091 CD59P13987 128 aa6.42□□□□□ -1.38
RIF1-206ENST00000453091 CA7P43166 264 aa6.42□□□□□ -1.38
RIF1-206ENST00000453091 EMP1P54849 157 aa6.42□□□□□ -1.38
RIF1-206ENST00000453091 ZNF56Q15929 161 aa6.42□□□□□ -1.38
RIF1-206ENST00000453091 Q6ZT83 130 aa6.42□□□□□ -1.38
RIF1-206ENST00000453091 CD177Q8N6Q3 437 aa6.42□□□□□ -1.38
RIF1-206ENST00000453091 NUDT10Q8NFP7 164 aa6.42□□□□□ -1.38
RIF1-206ENST00000453091 NUDT11Q96G61 164 aa6.42□□□□□ -1.38
RIF1-206ENST00000453091 FBLN5Q9UBX5 448 aa6.42□□□□□ -1.38
RIF1-206ENST00000453091 GREB1LQ9C091 1923 aaPredicted RBP6.42□□□□□ -1.38
RIF1-206ENST00000453091 PSMB11A5LHX3 300 aa6.42□□□□□ -1.38
RIF1-206ENST00000453091 LGALS3P17931 250 aaKnown RBP6.42□□□□□ -1.38
RIF1-206ENST00000453091 PLA2G5P39877 138 aa6.42□□□□□ -1.38
RIF1-206ENST00000453091 IGHV3-64A0A075B6Q5 118 aa6.42□□□□□ -1.38
RIF1-206ENST00000453091 MBD3L1Q8WWY6 194 aa6.42□□□□□ -1.38
RIF1-206ENST00000453091 RNF115Q9Y4L5 304 aa6.42□□□□□ -1.38
RIF1-206ENST00000453091 A0A1B0GWB2 263 aa6.42□□□□□ -1.38
RIF1-206ENST00000453091 TMEM170BQ5T4T1 132 aa6.42□□□□□ -1.38
RIF1-206ENST00000453091 GGNQ86UU5 652 aa6.42□□□□□ -1.38
RIF1-206ENST00000453091 WDR83OSQ9Y284 106 aa6.42□□□□□ -1.38
RIF1-206ENST00000453091 TRBV9A0A0B4J1U6 114 aa6.42□□□□□ -1.38
RIF1-206ENST00000453091 LIPFP07098 398 aa6.42□□□□□ -1.38
RIF1-206ENST00000453091 CSRP2Q16527 193 aa6.42□□□□□ -1.38
RIF1-206ENST00000453091 CLEC7AQ9BXN2 247 aa6.42□□□□□ -1.38
RIF1-206ENST00000453091 PHLDA3Q9Y5J5 127 aa6.42□□□□□ -1.38
RIF1-206ENST00000453091 NPIPB11E5RHQ5 1161 aa6.42□□□□□ -1.38
RIF1-206ENST00000453091 HOXB1P14653 301 aaPredicted RBP6.42□□□□□ -1.38
RIF1-206ENST00000453091 Q6ZVH6 145 aa6.42□□□□□ -1.38
RIF1-206ENST00000453091 MGST2Q99735 147 aa6.42□□□□□ -1.38
RIF1-206ENST00000453091 C1RLQ9NZP8 487 aa6.42□□□□□ -1.38
RIF1-206ENST00000453091 PEF1Q9UBV8 284 aaKnown RBP6.42□□□□□ -1.38
RIF1-206ENST00000453091 IGHV1-18A0A0C4DH31 117 aa6.41□□□□□ -1.38
RIF1-206ENST00000453091 SRD5A1P18405 259 aa6.41□□□□□ -1.38
RIF1-206ENST00000453091 NMSQ5H8A3 153 aa6.41□□□□□ -1.38
RIF1-206ENST00000453091 LINC01551Q86U37 167 aa6.41□□□□□ -1.38
RIF1-206ENST00000453091 IGFBPL1Q8WX77 278 aa6.41□□□□□ -1.38
RIF1-206ENST00000453091 TMEM186Q96B77 213 aa6.41□□□□□ -1.38
RIF1-206ENST00000453091 FBXL7Q9UJT9 491 aa6.41□□□□□ -1.38
RIF1-206ENST00000453091 NTF4P34130 210 aa6.41□□□□□ -1.38
RIF1-206ENST00000453091 ZNF726P1Q15940 193 aa6.41□□□□□ -1.38
RIF1-206ENST00000453091 EXOC3-AS1Q8N2X6 119 aa6.41□□□□□ -1.38
RIF1-206ENST00000453091 IGKV1-6A0A0C4DH72 117 aa6.41□□□□□ -1.38
RIF1-206ENST00000453091 IQCF6A8MYZ5 107 aa6.41□□□□□ -1.38
RIF1-206ENST00000453091 RPRMLQ8N4K4 120 aa6.41□□□□□ -1.38
RIF1-206ENST00000453091 GGTLC1Q9BX51 225 aa6.41□□□□□ -1.38
RIF1-206ENST00000453091 COL25A1Q9BXS0 654 aaPredicted RBP6.41□□□□□ -1.38
RIF1-206ENST00000453091 CLDN16Q9Y5I7 305 aa6.41□□□□□ -1.38
RIF1-206ENST00000453091 SCN3AQ9NY46 2000 aa6.41□□□□□ -1.38
RIF1-206ENST00000453091 LOC105371242A0A075B767 164 aa6.41□□□□□ -1.38
RIF1-206ENST00000453091 IGKV2-40A0A087WW87 121 aaPredicted RBP6.41□□□□□ -1.38
RIF1-206ENST00000453091 A0A087X0K7 114 aa6.41□□□□□ -1.38
RIF1-206ENST00000453091 SMKR1H3BMG3 65 aa6.41□□□□□ -1.38
RIF1-206ENST00000453091 TMEM50AO95807 157 aa6.41□□□□□ -1.38
RIF1-206ENST00000453091 IGKV2D-40P01614 121 aaPredicted RBP6.41□□□□□ -1.38
RIF1-206ENST00000453091 C3orf79P0CE67 100 aa6.41□□□□□ -1.38
RIF1-206ENST00000453091 DUTP33316 252 aaKnown RBP6.41□□□□□ -1.38
RIF1-206ENST00000453091 KLF17Q5JT82 389 aaPredicted RBP6.41□□□□□ -1.38
RIF1-206ENST00000453091 DUX5Q96PT3 197 aa6.41□□□□□ -1.38
RIF1-206ENST00000453091 JMJD8Q96S16 334 aa6.41□□□□□ -1.38
RIF1-206ENST00000453091 POLR3KQ9Y2Y1 108 aaPredicted RBP6.41□□□□□ -1.38
RIF1-206ENST00000453091 XIRP1Q702N8 1843 aaKnown RBP6.41□□□□□ -1.38
RIF1-206ENST00000453091 E9PQ18 207 aa6.41□□□□□ -1.38
RIF1-206ENST00000453091 SFTPCP11686 197 aa6.41□□□□□ -1.38
RIF1-206ENST00000453091 LYRM7Q5U5X0 104 aa6.41□□□□□ -1.38
RIF1-206ENST00000453091 SFXN3Q9BWM7 321 aa6.41□□□□□ -1.38
RIF1-206ENST00000453091 COL11A1P12107 1806 aaPredicted RBP6.41□□□□□ -1.38
RIF1-206ENST00000453091 C15orf61A6NNL5 157 aa6.4□□□□□ -1.38
RIF1-206ENST00000453091 RNASE4P34096 147 aaKnown RBP6.4□□□□□ -1.38
RIF1-206ENST00000453091 PSG9Q00887 426 aa6.4□□□□□ -1.38
RIF1-206ENST00000453091 KLRD1Q13241 179 aa6.4□□□□□ -1.38
RIF1-206ENST00000453091 ADIPOQQ15848 244 aa6.4□□□□□ -1.38
RIF1-206ENST00000453091 RPUSD1Q9UJJ7 312 aaKnown RBP6.4□□□□□ -1.38
RIF1-206ENST00000453091 EPDR1Q9UM22 224 aa6.4□□□□□ -1.38
RIF1-206ENST00000453091 ACTL10Q5JWF8 245 aa6.4□□□□□ -1.38
RIF1-206ENST00000453091 GTSCR1Q86UQ5 136 aa6.4□□□□□ -1.38
RIF1-206ENST00000453091 DIRC2Q96SL1 478 aa6.4□□□□□ -1.38
RIF1-206ENST00000453091 ELOVL5Q9NYP7 299 aa6.4□□□□□ -1.38
RIF1-206ENST00000453091 MICAL3Q7RTP6 2002 aa6.4□□□□□ -1.38
RIF1-206ENST00000453091 DLEU1O43261 78 aa6.4□□□□□ -1.38
RIF1-206ENST00000453091 NPC2P61916 151 aa6.4□□□□□ -1.38
RIF1-206ENST00000453091 ATP5G2Q06055 141 aa6.4□□□□□ -1.38
RIF1-206ENST00000453091 MRPL16Q9NX20 251 aaKnown RBP6.4□□□□□ -1.38
RIF1-206ENST00000453091 ZNF256Q9Y2P7 627 aaPredicted RBP6.4□□□□□ -1.38
RIF1-206ENST00000453091 A0A0G2JMZ2 1700 aa6.4□□□□□ -1.39
RIF1-206ENST00000453091 LRRC37A2A6NM11 1700 aa6.4□□□□□ -1.39
RIF1-206ENST00000453091 DYNLRB2Q8TF09 96 aa6.4□□□□□ -1.39
RIF1-206ENST00000453091 TRAV9-2A0A087WT02 112 aa6.4□□□□□ -1.39
RIF1-206ENST00000453091 ATP5J2P56134 94 aa6.4□□□□□ -1.39
RIF1-206ENST00000453091 MPV17L2Q567V2 206 aa6.4□□□□□ -1.39
RIF1-206ENST00000453091 UNQ6494/PRO21346Q6UXR6 183 aa6.4□□□□□ -1.39
RIF1-206ENST00000453091 MYO16Q9Y6X6 1858 aa6.4□□□□□ -1.39
RIF1-206ENST00000453091 FAM181BA6NEQ2 426 aa6.39□□□□□ -1.39
RIF1-206ENST00000453091 A0A1W2PRE2 83 aa6.39□□□□□ -1.39
RIF1-206ENST00000453091 FAM106CPP0CH98 169 aa6.39□□□□□ -1.39
RIF1-206ENST00000453091 PDLIM4P50479 330 aa6.39□□□□□ -1.39
RIF1-206ENST00000453091 PRR30Q53SZ7 412 aaPredicted RBP6.39□□□□□ -1.39
RIF1-206ENST00000453091 DUX4L9Q6RFH8 374 aaPredicted RBP6.39□□□□□ -1.39
RIF1-206ENST00000453091 SCGB3A1Q96QR1 104 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms