RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 LOC389332A0A1B0GUA5 103 aa5.97□□□□□ -1.45
BEST1-202ENST00000449131 DKK1O94907 266 aa5.97□□□□□ -1.45
BEST1-202ENST00000449131 TMEM30BQ3MIR4 351 aa5.97□□□□□ -1.45
BEST1-202ENST00000449131 TMEM177Q53S58 311 aa5.97□□□□□ -1.45
BEST1-202ENST00000449131 NMSQ5H8A3 153 aa5.97□□□□□ -1.45
BEST1-202ENST00000449131 DMRTC2Q8IXT2 367 aaPredicted RBP5.97□□□□□ -1.45
BEST1-202ENST00000449131 TMEM183AQ8IXX5 376 aa5.97□□□□□ -1.45
BEST1-202ENST00000449131 MUC15Q8N387 334 aa5.97□□□□□ -1.45
BEST1-202ENST00000449131 OSR1Q8TAX0 266 aaPredicted RBP5.97□□□□□ -1.45
BEST1-202ENST00000449131 PGLYRP4Q96LB8 373 aa5.97□□□□□ -1.45
BEST1-202ENST00000449131 RALYQ9UKM9 306 aaKnown RBP5.97□□□□□ -1.45
BEST1-202ENST00000449131 SELENOKQ9Y6D0 94 aa5.97□□□□□ -1.45
BEST1-202ENST00000449131 COL4A3Q01955 1670 aa5.97□□□□□ -1.45
BEST1-202ENST00000449131 PLXNB3Q9ULL4 1909 aa5.97□□□□□ -1.45
BEST1-202ENST00000449131 OBSL1O75147 1896 aa5.97□□□□□ -1.45
BEST1-202ENST00000449131 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.97□□□□□ -1.45
BEST1-202ENST00000449131 PCNX2A6NKB5 2137 aa5.97□□□□□ -1.45
BEST1-202ENST00000449131 YPEL1O60688 119 aa5.97□□□□□ -1.45
BEST1-202ENST00000449131 BSPH1Q075Z2 132 aa5.97□□□□□ -1.45
BEST1-202ENST00000449131 FOXL2NBQ6ZUU3 175 aa5.97□□□□□ -1.45
BEST1-202ENST00000449131 YPEL2Q96QA6 119 aa5.97□□□□□ -1.45
BEST1-202ENST00000449131 C19orf24Q9BVV8 132 aa5.97□□□□□ -1.45
BEST1-202ENST00000449131 CLEC7AQ9BXN2 247 aa5.97□□□□□ -1.45
BEST1-202ENST00000449131 MRPL20Q9BYC9 149 aaKnown RBP5.97□□□□□ -1.45
BEST1-202ENST00000449131 MRPL37Q9BZE1 423 aaKnown RBP5.97□□□□□ -1.45
BEST1-202ENST00000449131 HSPB7Q9UBY9 170 aa5.97□□□□□ -1.45
BEST1-202ENST00000449131 SAA2-SAA4A0A096LPE2 208 aa5.96□□□□□ -1.45
BEST1-202ENST00000449131 IGHV1-18A0A0C4DH31 117 aa5.96□□□□□ -1.45
BEST1-202ENST00000449131 OR9G9P0C7N8 305 aa5.96□□□□□ -1.45
BEST1-202ENST00000449131 STAG3L3P0CL85 134 aa5.96□□□□□ -1.45
BEST1-202ENST00000449131 SAA2P0DJI9 122 aaPredicted RBP5.96□□□□□ -1.45
BEST1-202ENST00000449131 DUTP33316 252 aaKnown RBP5.96□□□□□ -1.45
BEST1-202ENST00000449131 HINT1P49773 126 aaPredicted RBP5.96□□□□□ -1.45
BEST1-202ENST00000449131 RELBQ01201 579 aa5.96□□□□□ -1.45
BEST1-202ENST00000449131 PRB3Q04118 309 aaPredicted RBP5.96□□□□□ -1.45
BEST1-202ENST00000449131 CDPF1Q6NVV7 123 aa5.96□□□□□ -1.45
BEST1-202ENST00000449131 C19orf35Q6ZS72 473 aa5.96□□□□□ -1.45
BEST1-202ENST00000449131 MIR17HGQ75NE6 70 aa5.96□□□□□ -1.45
BEST1-202ENST00000449131 YLPM1P49750 1951 aaKnown RBP5.96□□□□□ -1.45
BEST1-202ENST00000449131 M0QZK8 103 aa5.96□□□□□ -1.46
BEST1-202ENST00000449131 ETV2O00321 342 aaPredicted RBP5.96□□□□□ -1.46
BEST1-202ENST00000449131 GGCTO75223 188 aaKnown RBP5.96□□□□□ -1.46
BEST1-202ENST00000449131 IGKV1-5P01602 117 aa5.96□□□□□ -1.46
BEST1-202ENST00000449131 MFAP4P55083 255 aa5.96□□□□□ -1.46
BEST1-202ENST00000449131 ATP5IP56385 69 aaPredicted RBP5.96□□□□□ -1.46
BEST1-202ENST00000449131 RPL30P62888 115 aaKnown RBP5.96□□□□□ -1.46
BEST1-202ENST00000449131 FAM53AQ6NSI3 398 aaPredicted RBP5.96□□□□□ -1.46
BEST1-202ENST00000449131 HEPN1Q6WQI6 88 aa5.96□□□□□ -1.46
BEST1-202ENST00000449131 LINC00305Q7Z4B0 112 aa5.96□□□□□ -1.46
BEST1-202ENST00000449131 WDR31Q8NA23 367 aa5.96□□□□□ -1.46
BEST1-202ENST00000449131 FBXL15Q9H469 300 aa5.96□□□□□ -1.46
BEST1-202ENST00000449131 LTBP2Q14767 1821 aa5.96□□□□□ -1.46
BEST1-202ENST00000449131 A4D1N5 150 aa5.96□□□□□ -1.46
BEST1-202ENST00000449131 TM4SF5O14894 197 aa5.96□□□□□ -1.46
BEST1-202ENST00000449131 C1QTNF9P0C862 333 aa5.96□□□□□ -1.46
BEST1-202ENST00000449131 UCNP55089 124 aa5.96□□□□□ -1.46
BEST1-202ENST00000449131 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.96□□□□□ -1.46
BEST1-202ENST00000449131 TMEM116Q8NCL8 245 aa5.96□□□□□ -1.46
BEST1-202ENST00000449131 FAM57AQ8TBR7 257 aa5.96□□□□□ -1.46
BEST1-202ENST00000449131 MRPL32Q9BYC8 188 aaKnown RBP5.96□□□□□ -1.46
BEST1-202ENST00000449131 WNT10AQ9GZT5 417 aa5.96□□□□□ -1.46
BEST1-202ENST00000449131 MED13Q9UHV7 2174 aa5.96□□□□□ -1.46
BEST1-202ENST00000449131 A0A0G2JRQ6 117 aa5.96□□□□□ -1.46
BEST1-202ENST00000449131 TMEM189A5PLL7 270 aa5.96□□□□□ -1.46
BEST1-202ENST00000449131 OR2T8A6NH00 312 aa5.96□□□□□ -1.46
BEST1-202ENST00000449131 C17orf100A8MU93 164 aa5.96□□□□□ -1.46
BEST1-202ENST00000449131 KIR2DL2P43627 348 aaPredicted RBP5.96□□□□□ -1.46
BEST1-202ENST00000449131 LCN2P80188 198 aa5.96□□□□□ -1.46
BEST1-202ENST00000449131 GOLT1AQ6ZVE7 132 aa5.96□□□□□ -1.46
BEST1-202ENST00000449131 FAM90A1Q86YD7 464 aa5.96□□□□□ -1.46
BEST1-202ENST00000449131 SRSF12Q8WXF0 261 aaKnown RBP5.96□□□□□ -1.46
BEST1-202ENST00000449131 ELOVL5Q9NYP7 299 aa5.96□□□□□ -1.46
BEST1-202ENST00000449131 METRNQ9UJH8 293 aa5.96□□□□□ -1.46
BEST1-202ENST00000449131 HSPB8Q9UJY1 196 aa5.96□□□□□ -1.46
BEST1-202ENST00000449131 S4R3C0 116 aa5.96□□□□□ -1.46
BEST1-202ENST00000449131 ALPK3Q96L96 1907 aa5.96□□□□□ -1.46
BEST1-202ENST00000449131 MUC3AQ02505 3323 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 A0A1B0GUS0 222 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 AMY1AP04745 511 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 LIPFP07098 398 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 NBEAP1P0C6P0 100 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 APOBEC3AP31941 199 aaPredicted RBP5.95□□□□□ -1.46
BEST1-202ENST00000449131 SRSF7Q16629 238 aaKnown RBP eCLIP5.95□□□□□ -1.46
BEST1-202ENST00000449131 UNQ5815/PRO19632Q6UWF5 114 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 C20orf204Q6ZNR8 217 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 OR5R1Q8NH85 324 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 MBD3L1Q8WWY6 194 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 WDR83OSQ9Y284 106 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 COL4A4P53420 1690 aaPredicted RBP5.95□□□□□ -1.46
BEST1-202ENST00000449131 LY6G6EA0A0G2JKS1 128 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 CGB1A6NKQ9 187 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 SAA1P0DJI8 122 aaPredicted RBP5.95□□□□□ -1.46
BEST1-202ENST00000449131 MAS1LP35410 378 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 PPOXP50336 477 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 LHFPL4Q7Z7J7 247 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 FAM19A2Q8N3H0 131 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 PROK2Q9HC23 129 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 U3KQA8 63 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 CEACAM1P13688 526 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 CD99P14209 185 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms