RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 IBA57Q5T440 356 aaKnown RBP11.62□□□□□ -0.55
ERCC3-203ENST00000445889 ZCCHC24Q8N2G6 241 aaKnown RBP11.62□□□□□ -0.55
ERCC3-203ENST00000445889 C11orf52Q96A22 123 aa11.62□□□□□ -0.55
ERCC3-203ENST00000445889 RNF2Q99496 336 aa11.62□□□□□ -0.55
ERCC3-203ENST00000445889 TP73-AS1Q9UF72 201 aa11.62□□□□□ -0.55
ERCC3-203ENST00000445889 E7EUB6 86 aa11.62□□□□□ -0.55
ERCC3-203ENST00000445889 BMPR1BO00238 502 aa11.62□□□□□ -0.55
ERCC3-203ENST00000445889 C3orf79P0CE67 100 aa11.62□□□□□ -0.55
ERCC3-203ENST00000445889 C1orf174Q8IYL3 243 aa11.62□□□□□ -0.55
ERCC3-203ENST00000445889 RPRMLQ8N4K4 120 aa11.62□□□□□ -0.55
ERCC3-203ENST00000445889 FAM216BQ8N7L0 139 aa11.62□□□□□ -0.55
ERCC3-203ENST00000445889 SSBP4Q9BWG4 385 aaPredicted RBP11.62□□□□□ -0.55
ERCC3-203ENST00000445889 ZNF355PQ9NSJ1 428 aa11.62□□□□□ -0.55
ERCC3-203ENST00000445889 APELAP0DMC3 54 aa11.61□□□□□ -0.55
ERCC3-203ENST00000445889 AREGP15514 252 aa11.61□□□□□ -0.55
ERCC3-203ENST00000445889 SLAQ13239 276 aa11.61□□□□□ -0.55
ERCC3-203ENST00000445889 COL5A1-AS1Q5SY13 56 aa11.61□□□□□ -0.55
ERCC3-203ENST00000445889 DNAJC4Q9NNZ3 241 aa11.61□□□□□ -0.55
ERCC3-203ENST00000445889 TMEM14BQ9NUH8 114 aa11.61□□□□□ -0.55
ERCC3-203ENST00000445889 RELNP78509 3460 aa11.61□□□□□ -0.55
ERCC3-203ENST00000445889 A0A1W2PN81 502 aa11.61□□□□□ -0.55
ERCC3-203ENST00000445889 ZNF891A8MT65 544 aaPredicted RBP11.61□□□□□ -0.55
ERCC3-203ENST00000445889 CDX4O14627 284 aaPredicted RBP11.61□□□□□ -0.55
ERCC3-203ENST00000445889 OR4B1Q8NGF8 309 aa11.61□□□□□ -0.55
ERCC3-203ENST00000445889 KCNS1Q96KK3 526 aa11.61□□□□□ -0.55
ERCC3-203ENST00000445889 CDC42EP3Q9UKI2 254 aa11.61□□□□□ -0.55
ERCC3-203ENST00000445889 SLC45A2Q9UMX9 530 aa11.61□□□□□ -0.55
ERCC3-203ENST00000445889 PIEZO2Q9H5I5 2752 aa11.61□□□□□ -0.55
ERCC3-203ENST00000445889 TRAV9-1A0A075B6T8 112 aa11.6□□□□□ -0.55
ERCC3-203ENST00000445889 SLC35E1Q96K37 410 aa11.6□□□□□ -0.55
ERCC3-203ENST00000445889 RPH3ALQ9UNE2 315 aa11.6□□□□□ -0.55
ERCC3-203ENST00000445889 DPRXA6NFQ7 191 aa11.6□□□□□ -0.55
ERCC3-203ENST00000445889 ZZEF1O43149 2961 aa11.6□□□□□ -0.55
ERCC3-203ENST00000445889 HYPMO75409 117 aa11.6□□□□□ -0.55
ERCC3-203ENST00000445889 ZNF324O75467 553 aaPredicted RBP11.6□□□□□ -0.55
ERCC3-203ENST00000445889 CAMPP49913 170 aa11.6□□□□□ -0.55
ERCC3-203ENST00000445889 C10orf55Q5SWW7 151 aa11.6□□□□□ -0.55
ERCC3-203ENST00000445889 TTC28Q96AY4 2481 aa11.6□□□□□ -0.55
ERCC3-203ENST00000445889 FAM90A9PA6NNJ1 464 aa11.59□□□□□ -0.55
ERCC3-203ENST00000445889 H3BTX0 84 aa11.59□□□□□ -0.55
ERCC3-203ENST00000445889 IGLV2-8P01709 118 aa11.59□□□□□ -0.55
ERCC3-203ENST00000445889 HINT1P49773 126 aaPredicted RBP11.59□□□□□ -0.55
ERCC3-203ENST00000445889 TSKUQ8WUA8 353 aa11.59□□□□□ -0.55
ERCC3-203ENST00000445889 COLQQ9Y215 455 aaPredicted RBP11.59□□□□□ -0.55
ERCC3-203ENST00000445889 TRGV8A0A0C4DH27 118 aa11.59□□□□□ -0.55
ERCC3-203ENST00000445889 SFTPCP11686 197 aa11.59□□□□□ -0.55
ERCC3-203ENST00000445889 USF1P22415 310 aaPredicted RBP11.59□□□□□ -0.55
ERCC3-203ENST00000445889 HNRNPA3P51991 378 aaKnown RBP11.59□□□□□ -0.55
ERCC3-203ENST00000445889 GAGE1Q13065 139 aa11.59□□□□□ -0.55
ERCC3-203ENST00000445889 C22orf34Q6ZV56 151 aa11.59□□□□□ -0.55
ERCC3-203ENST00000445889 NIT1Q86X76 327 aa11.59□□□□□ -0.55
ERCC3-203ENST00000445889 NEUROG1Q92886 237 aa11.59□□□□□ -0.55
ERCC3-203ENST00000445889 CHODLQ9H9P2 273 aa11.59□□□□□ -0.55
ERCC3-203ENST00000445889 SLC35D1Q9NTN3 355 aa11.59□□□□□ -0.55
ERCC3-203ENST00000445889 COL27A1Q8IZC6 1860 aaPredicted RBP11.59□□□□□ -0.55
ERCC3-203ENST00000445889 TEX50A0A1B0GTY4 177 aa11.59□□□□□ -0.55
ERCC3-203ENST00000445889 F2RL2O00254 374 aa11.59□□□□□ -0.55
ERCC3-203ENST00000445889 APCSP02743 223 aa11.59□□□□□ -0.55
ERCC3-203ENST00000445889 CTRLP40313 264 aa11.59□□□□□ -0.55
ERCC3-203ENST00000445889 PRB3Q04118 309 aaPredicted RBP11.59□□□□□ -0.55
ERCC3-203ENST00000445889 WDR73Q6P4I2 378 aa11.59□□□□□ -0.55
ERCC3-203ENST00000445889 TRAT1Q6PIZ9 186 aa11.59□□□□□ -0.55
ERCC3-203ENST00000445889 BORCS7Q96B45 105 aa11.59□□□□□ -0.55
ERCC3-203ENST00000445889 TMEM167BQ9NRX6 74 aa11.59□□□□□ -0.55
ERCC3-203ENST00000445889 TECRQ9NZ01 308 aaKnown RBP11.59□□□□□ -0.55
ERCC3-203ENST00000445889 TANC2Q9HCD6 1990 aa11.58□□□□□ -0.56
ERCC3-203ENST00000445889 ZNF318Q5VUA4 2279 aa11.58□□□□□ -0.56
ERCC3-203ENST00000445889 IGHV3-21A0A0B4J1V1 117 aa11.58□□□□□ -0.56
ERCC3-203ENST00000445889 M0QZ24 198 aa11.58□□□□□ -0.56
ERCC3-203ENST00000445889 CORTO00230 105 aa11.58□□□□□ -0.56
ERCC3-203ENST00000445889 CT45A6P0DMU7 189 aa11.58□□□□□ -0.56
ERCC3-203ENST00000445889 CT45A5P0DMU8 189 aa11.58□□□□□ -0.56
ERCC3-203ENST00000445889 CT45A7P0DMV0 189 aa11.58□□□□□ -0.56
ERCC3-203ENST00000445889 IGLC2P0DOY2 106 aa11.58□□□□□ -0.56
ERCC3-203ENST00000445889 IGLC3P0DOY3 106 aa11.58□□□□□ -0.56
ERCC3-203ENST00000445889 GNG5P63218 68 aa11.58□□□□□ -0.56
ERCC3-203ENST00000445889 PMCHL1Q16048 86 aa11.58□□□□□ -0.56
ERCC3-203ENST00000445889 ERASQ7Z444 233 aa11.58□□□□□ -0.56
ERCC3-203ENST00000445889 PPP1R35Q8TAP8 253 aa11.58□□□□□ -0.56
ERCC3-203ENST00000445889 ZNF71Q9NQZ8 489 aaPredicted RBP11.58□□□□□ -0.56
ERCC3-203ENST00000445889 FOXA2Q9Y261 457 aaPredicted RBP11.58□□□□□ -0.56
ERCC3-203ENST00000445889 TRBV9A0A0B4J1U6 114 aa11.58□□□□□ -0.56
ERCC3-203ENST00000445889 KBTBD11-OT1A0A1B0GTJ5 212 aa11.58□□□□□ -0.56
ERCC3-203ENST00000445889 AMY1AP04745 511 aa11.58□□□□□ -0.56
ERCC3-203ENST00000445889 REG1AP05451 166 aa11.58□□□□□ -0.56
ERCC3-203ENST00000445889 OR5G3P0C626 314 aa11.58□□□□□ -0.56
ERCC3-203ENST00000445889 MFAP2P55001 183 aa11.58□□□□□ -0.56
ERCC3-203ENST00000445889 RPL8P62917 257 aaKnown RBP11.58□□□□□ -0.56
ERCC3-203ENST00000445889 UBE2L3P68036 154 aaKnown RBP11.58□□□□□ -0.56
ERCC3-203ENST00000445889 DIAPH2-AS1Q14236 149 aa11.58□□□□□ -0.56
ERCC3-203ENST00000445889 ZNF331Q9NQX6 463 aaPredicted RBP11.58□□□□□ -0.56
ERCC3-203ENST00000445889 LY96Q9Y6Y9 160 aa11.58□□□□□ -0.56
ERCC3-203ENST00000445889 RPL19P84098 196 aaKnown RBP11.57□□□□□ -0.56
ERCC3-203ENST00000445889 Q56UQ5 140 aa11.57□□□□□ -0.56
ERCC3-203ENST00000445889 OR10J3Q5JRS4 329 aa11.57□□□□□ -0.56
ERCC3-203ENST00000445889 GDF5OSQ5U4N7 250 aa11.57□□□□□ -0.56
ERCC3-203ENST00000445889 C19orf35Q6ZS72 473 aa11.57□□□□□ -0.56
ERCC3-203ENST00000445889 BHLHA15Q7RTS1 189 aaPredicted RBP11.57□□□□□ -0.56
ERCC3-203ENST00000445889 ZNF439Q8NDP4 499 aa11.57□□□□□ -0.56
ERCC3-203ENST00000445889 CLEC7AQ9BXN2 247 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms