RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 FAM89BQ8N5H3 189 aa15.66■□□□□ 0.1
SHANK3-203ENST00000445220 OR13C6PQ8NH95 151 aa15.66■□□□□ 0.1
SHANK3-203ENST00000445220 FAM186AA6NE01 2351 aa15.66■□□□□ 0.1
SHANK3-203ENST00000445220 GVINP1Q7Z2Y8 2422 aa15.65■□□□□ 0.1
SHANK3-203ENST00000445220 IGHV1-69-2A0A0G2JMI3 117 aa15.65■□□□□ 0.1
SHANK3-203ENST00000445220 ERVK11-1P61568 191 aa15.65■□□□□ 0.1
SHANK3-203ENST00000445220 SFTA2Q6UW10 78 aa15.65■□□□□ 0.1
SHANK3-203ENST00000445220 ATP5L2Q7Z4Y8 100 aa15.65■□□□□ 0.1
SHANK3-203ENST00000445220 CNOT1A5YKK6 2376 aaKnown RBP15.65■□□□□ 0.1
SHANK3-203ENST00000445220 TRAV8-4A0A0B4J246 113 aa15.65■□□□□ 0.1
SHANK3-203ENST00000445220 FAM181BA6NEQ2 426 aa15.65■□□□□ 0.1
SHANK3-203ENST00000445220 A8MWP6 167 aa15.65■□□□□ 0.1
SHANK3-203ENST00000445220 NKX2-8O15522 239 aa15.65■□□□□ 0.1
SHANK3-203ENST00000445220 TRPM7Q96QT4 1865 aa15.65■□□□□ 0.1
SHANK3-203ENST00000445220 TMEM256Q8N2U0 113 aa15.65■□□□□ 0.1
SHANK3-203ENST00000445220 DDB2Q92466 427 aa15.65■□□□□ 0.1
SHANK3-203ENST00000445220 Q9H3A6 140 aa15.65■□□□□ 0.1
SHANK3-203ENST00000445220 GP6Q9HCN6 339 aa15.65■□□□□ 0.1
SHANK3-203ENST00000445220 MUC21A0A0G2JKD1 596 aa15.64■□□□□ 0.09
SHANK3-203ENST00000445220 MUC21A0A140T8X8 626 aa15.64■□□□□ 0.09
SHANK3-203ENST00000445220 MUC21Q5SSG8 566 aa15.64■□□□□ 0.09
SHANK3-203ENST00000445220 COQ2Q96H96 371 aa15.64■□□□□ 0.09
SHANK3-203ENST00000445220 IGKV3D-11A0A0A0MRZ8 115 aa15.64■□□□□ 0.09
SHANK3-203ENST00000445220 NPIPB11E5RHQ5 1161 aa15.64■□□□□ 0.09
SHANK3-203ENST00000445220 ZNF883P0CG24 379 aa15.64■□□□□ 0.09
SHANK3-203ENST00000445220 FAM159AQ6UWV7 190 aa15.64■□□□□ 0.09
SHANK3-203ENST00000445220 ADCYAP1P18509 176 aa15.64■□□□□ 0.09
SHANK3-203ENST00000445220 PAQR4Q8N4S7 273 aaPredicted RBP15.64■□□□□ 0.09
SHANK3-203ENST00000445220 LOC285556D6RIA3 1793 aa15.64■□□□□ 0.09
SHANK3-203ENST00000445220 RALGAPA2Q2PPJ7 1873 aa15.64■□□□□ 0.09
SHANK3-203ENST00000445220 IGKV1D-13A0A0B4J2D9 117 aa15.64■□□□□ 0.09
SHANK3-203ENST00000445220 M0R381 172 aa15.64■□□□□ 0.09
SHANK3-203ENST00000445220 IGKV1-13P0DP09 117 aa15.64■□□□□ 0.09
SHANK3-203ENST00000445220 NPPCP23582 126 aa15.64■□□□□ 0.09
SHANK3-203ENST00000445220 RNASEH2CQ8TDP1 164 aaKnown RBP15.64■□□□□ 0.09
SHANK3-203ENST00000445220 VSIRQ9H7M9 311 aa15.64■□□□□ 0.09
SHANK3-203ENST00000445220 ZNF703Q9H7S9 590 aaPredicted RBP15.64■□□□□ 0.09
SHANK3-203ENST00000445220 PRR7Q8TB68 274 aa15.63■□□□□ 0.09
SHANK3-203ENST00000445220 TSKUQ8WUA8 353 aa15.63■□□□□ 0.09
SHANK3-203ENST00000445220 MST1P26927 711 aa15.63■□□□□ 0.09
SHANK3-203ENST00000445220 GTSF1LQ9H1H1 148 aa15.63■□□□□ 0.09
SHANK3-203ENST00000445220 NXT2Q9NPJ8 142 aaKnown RBP15.63■□□□□ 0.09
SHANK3-203ENST00000445220 NCOR1O75376 2440 aa15.63■□□□□ 0.09
SHANK3-203ENST00000445220 GATA2P23769 480 aaPredicted RBP15.63■□□□□ 0.09
SHANK3-203ENST00000445220 ASIPP42127 132 aa15.63■□□□□ 0.09
SHANK3-203ENST00000445220 TMEM171Q8WVE6 324 aa15.63■□□□□ 0.09
SHANK3-203ENST00000445220 OTORQ9NRC9 128 aa15.63■□□□□ 0.09
SHANK3-203ENST00000445220 MPV17L2Q567V2 206 aa15.62■□□□□ 0.09
SHANK3-203ENST00000445220 TMEM105Q8N8V8 129 aa15.62■□□□□ 0.09
SHANK3-203ENST00000445220 IFI27L1Q96BM0 104 aa15.62■□□□□ 0.09
SHANK3-203ENST00000445220 VKORC1Q9BQB6 163 aa15.62■□□□□ 0.09
SHANK3-203ENST00000445220 WDR83OSQ9Y284 106 aa15.62■□□□□ 0.09
SHANK3-203ENST00000445220 PIKFYVEQ9Y2I7 2098 aa15.62■□□□□ 0.09
SHANK3-203ENST00000445220 A0A087WV48 116 aa15.62■□□□□ 0.09
SHANK3-203ENST00000445220 PPP1R32Q7Z5V6 425 aa15.62■□□□□ 0.09
SHANK3-203ENST00000445220 LHFPL1Q86WI0 220 aa15.62■□□□□ 0.09
SHANK3-203ENST00000445220 OR5AN1Q8NGI8 311 aa15.62■□□□□ 0.09
SHANK3-203ENST00000445220 PRR32B1ATL7 298 aa15.62■□□□□ 0.09
SHANK3-203ENST00000445220 PPBPP02775 128 aa15.62■□□□□ 0.09
SHANK3-203ENST00000445220 CD55P08174 381 aa15.62■□□□□ 0.09
SHANK3-203ENST00000445220 LINC01551Q86U37 167 aa15.62■□□□□ 0.09
SHANK3-203ENST00000445220 OR10W1Q8NGF6 305 aa15.62■□□□□ 0.09
SHANK3-203ENST00000445220 SPAG8Q99932 426 aaPredicted RBP15.62■□□□□ 0.09
SHANK3-203ENST00000445220 GAGE12BA1L429 117 aa15.61■□□□□ 0.09
SHANK3-203ENST00000445220 H7C1H1 209 aa15.61■□□□□ 0.09
SHANK3-203ENST00000445220 IGKCP01834 107 aa15.61■□□□□ 0.09
SHANK3-203ENST00000445220 CDCP2Q5VXM1 449 aa15.61■□□□□ 0.09
SHANK3-203ENST00000445220 EPDR1Q9UM22 224 aa15.61■□□□□ 0.09
SHANK3-203ENST00000445220 TMEM74BQ9NUR3 256 aa15.61■□□□□ 0.09
SHANK3-203ENST00000445220 PSG1P11464 419 aa15.61■□□□□ 0.09
SHANK3-203ENST00000445220 SHISA5Q8N114 240 aa15.61■□□□□ 0.09
SHANK3-203ENST00000445220 AGMATQ9BSE5 352 aa15.61■□□□□ 0.09
SHANK3-203ENST00000445220 C3orf79P0CE67 100 aa15.61■□□□□ 0.09
SHANK3-203ENST00000445220 SRSF4Q08170 494 aaKnown RBP15.61■□□□□ 0.09
SHANK3-203ENST00000445220 ACP7Q6ZNF0 438 aa15.61■□□□□ 0.09
SHANK3-203ENST00000445220 ALPK2Q86TB3 2170 aa15.6■□□□□ 0.09
SHANK3-203ENST00000445220 IGHV2-70P01814 119 aa15.6■□□□□ 0.09
SHANK3-203ENST00000445220 PF4V1P10720 104 aa15.6■□□□□ 0.09
SHANK3-203ENST00000445220 SUPT4H1P63272 117 aaKnown RBP15.6■□□□□ 0.09
SHANK3-203ENST00000445220 NAA38Q9BRA0 125 aaKnown RBP15.6■□□□□ 0.09
SHANK3-203ENST00000445220 CRIM1Q9NZV1 1036 aa15.6■□□□□ 0.09
SHANK3-203ENST00000445220 COX11Q9Y6N1 276 aa15.6■□□□□ 0.09
SHANK3-203ENST00000445220 KBTBD11-OT1A0A1B0GTJ5 212 aa15.6■□□□□ 0.09
SHANK3-203ENST00000445220 H3BRM9 83 aa15.6■□□□□ 0.09
SHANK3-203ENST00000445220 IGHV4-39P01824 125 aa15.6■□□□□ 0.09
SHANK3-203ENST00000445220 RASL11AQ6T310 242 aa15.6■□□□□ 0.09
SHANK3-203ENST00000445220 VWCEQ96DN2 955 aa15.6■□□□□ 0.09
SHANK3-203ENST00000445220 SMPXQ9UHP9 88 aa15.6■□□□□ 0.09
SHANK3-203ENST00000445220 LTBRP36941 435 aa15.59■□□□□ 0.09
SHANK3-203ENST00000445220 GNG5P63218 68 aa15.59■□□□□ 0.09
SHANK3-203ENST00000445220 TIAF1O95411 115 aa15.59■□□□□ 0.09
SHANK3-203ENST00000445220 EFNB3Q15768 340 aa15.59■□□□□ 0.09
SHANK3-203ENST00000445220 DEPPQ9NTK1 212 aa15.59■□□□□ 0.09
SHANK3-203ENST00000445220 CCL1P22362 96 aa15.59■□□□□ 0.09
SHANK3-203ENST00000445220 LINC01559Q495D7 138 aa15.59■□□□□ 0.09
SHANK3-203ENST00000445220 IGKV1-9A0A0C4DH69 117 aa15.59■□□□□ 0.09
SHANK3-203ENST00000445220 NPFFO15130 113 aa15.59■□□□□ 0.09
SHANK3-203ENST00000445220 PAX2Q02962 417 aa15.59■□□□□ 0.09
SHANK3-203ENST00000445220 OR13A1Q8NGR1 328 aa15.59■□□□□ 0.09
SHANK3-203ENST00000445220 CD5LO43866 347 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms