RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 CIB3Q96Q77 187 aaPredicted RBP13.39□□□□□ -0.27
LIME1-202ENST00000444951 OR5B12Q96R08 314 aa13.39□□□□□ -0.27
LIME1-202ENST00000444951 S4R3C0 116 aa13.39□□□□□ -0.27
LIME1-202ENST00000444951 H3BUA1 57 aa13.38□□□□□ -0.27
LIME1-202ENST00000444951 CYB5BO43169 146 aa13.38□□□□□ -0.27
LIME1-202ENST00000444951 NDUFB8O95169 186 aa13.38□□□□□ -0.27
LIME1-202ENST00000444951 TMEM50AO95807 157 aa13.38□□□□□ -0.27
LIME1-202ENST00000444951 IGHV3-11P01762 117 aa13.38□□□□□ -0.27
LIME1-202ENST00000444951 RLN2P04090 185 aa13.38□□□□□ -0.27
LIME1-202ENST00000444951 PVALBP20472 110 aaPredicted RBP13.38□□□□□ -0.27
LIME1-202ENST00000444951 BCAP31P51572 246 aa13.38□□□□□ -0.27
LIME1-202ENST00000444951 OR1P1Q8NH06 330 aa13.38□□□□□ -0.27
LIME1-202ENST00000444951 RAB40CQ96S21 281 aa13.38□□□□□ -0.27
LIME1-202ENST00000444951 CITED2Q99967 270 aaPredicted RBP13.38□□□□□ -0.27
LIME1-202ENST00000444951 SLA2Q9H6Q3 261 aa13.38□□□□□ -0.27
LIME1-202ENST00000444951 IGLV11-55A0A075B6I3 123 aa13.37□□□□□ -0.27
LIME1-202ENST00000444951 IGHV3-48P01763 117 aa13.37□□□□□ -0.27
LIME1-202ENST00000444951 IGHV3-23P01764 117 aa13.37□□□□□ -0.27
LIME1-202ENST00000444951 IFNA4P05014 189 aa13.37□□□□□ -0.27
LIME1-202ENST00000444951 GIPP09681 153 aaPredicted RBP13.37□□□□□ -0.27
LIME1-202ENST00000444951 HIST1H1BP16401 226 aaKnown RBP13.37□□□□□ -0.27
LIME1-202ENST00000444951 PAX9P55771 341 aa13.37□□□□□ -0.27
LIME1-202ENST00000444951 RPL23AP62750 156 aaKnown RBP13.37□□□□□ -0.27
LIME1-202ENST00000444951 ZNF114Q8NC26 417 aa13.37□□□□□ -0.27
LIME1-202ENST00000444951 TMEM170AQ8WVE7 144 aa13.37□□□□□ -0.27
LIME1-202ENST00000444951 SMIM8Q96KF7 97 aa13.37□□□□□ -0.27
LIME1-202ENST00000444951 OR4C12Q96R67 309 aa13.37□□□□□ -0.27
LIME1-202ENST00000444951 ZFP57Q9NU63 452 aa13.37□□□□□ -0.27
LIME1-202ENST00000444951 OR5AC2Q9NZP5 309 aa13.37□□□□□ -0.27
LIME1-202ENST00000444951 STRAPQ9Y3F4 350 aaKnown RBP13.37□□□□□ -0.27
LIME1-202ENST00000444951 U3KQ87 197 aa13.37□□□□□ -0.27
LIME1-202ENST00000444951 C15orf62A8K5M9 175 aa13.36□□□□□ -0.27
LIME1-202ENST00000444951 NUDT19A8MXV4 375 aa13.36□□□□□ -0.27
LIME1-202ENST00000444951 MPC2O95563 127 aa13.36□□□□□ -0.27
LIME1-202ENST00000444951 OR8U8P0C7N1 319 aa13.36□□□□□ -0.27
LIME1-202ENST00000444951 CAV2P51636 162 aa13.36□□□□□ -0.27
LIME1-202ENST00000444951 RPP30P78346 268 aaKnown RBP13.36□□□□□ -0.27
LIME1-202ENST00000444951 ATP5G2Q06055 141 aa13.36□□□□□ -0.27
LIME1-202ENST00000444951 C15orf32Q32M92 178 aa13.36□□□□□ -0.27
LIME1-202ENST00000444951 NSUN5P1Q3KNT7 163 aa13.36□□□□□ -0.27
LIME1-202ENST00000444951 C2orf83Q53S99 150 aa13.36□□□□□ -0.27
LIME1-202ENST00000444951 C18orf65Q6ZTR6 163 aa13.36□□□□□ -0.27
LIME1-202ENST00000444951 NECAP1Q8NC96 275 aa13.36□□□□□ -0.27
LIME1-202ENST00000444951 OR1L6Q8NGR2 347 aa13.36□□□□□ -0.27
LIME1-202ENST00000444951 THYN1Q9P016 225 aa13.36□□□□□ -0.27
LIME1-202ENST00000444951 TRBV9A0A0B4J1U6 114 aa13.35□□□□□ -0.27
LIME1-202ENST00000444951 H0YIZ8 118 aa13.35□□□□□ -0.27
LIME1-202ENST00000444951 SMLR1H3BR10 107 aa13.35□□□□□ -0.27
LIME1-202ENST00000444951 DEDDO75618 318 aa13.35□□□□□ -0.27
LIME1-202ENST00000444951 RAP2BP61225 183 aa13.35□□□□□ -0.27
LIME1-202ENST00000444951 RAB11AP62491 216 aa13.35□□□□□ -0.27
LIME1-202ENST00000444951 BSXQ3C1V8 233 aa13.35□□□□□ -0.27
LIME1-202ENST00000444951 ZNF491Q8N8L2 437 aa13.35□□□□□ -0.27
LIME1-202ENST00000444951 GNB4Q9HAV0 340 aa13.35□□□□□ -0.27
LIME1-202ENST00000444951 A0A0G2JLM5 398 aa13.34□□□□□ -0.27
LIME1-202ENST00000444951 MFSD2BA6NFX1 497 aa13.34□□□□□ -0.27
LIME1-202ENST00000444951 FAM24AA6NFZ4 105 aa13.34□□□□□ -0.27
LIME1-202ENST00000444951 FAM223BA6NKX1 122 aa13.34□□□□□ -0.27
LIME1-202ENST00000444951 LY86O95711 162 aa13.34□□□□□ -0.27
LIME1-202ENST00000444951 MT-CO2P00403 227 aa13.34□□□□□ -0.27
LIME1-202ENST00000444951 METTL15P1P0C7V9 234 aa13.34□□□□□ -0.27
LIME1-202ENST00000444951 PET100P0DJ07 73 aa13.34□□□□□ -0.27
LIME1-202ENST00000444951 OPRK1P41145 380 aa13.34□□□□□ -0.27
LIME1-202ENST00000444951 EXOSC2Q13868 293 aaKnown RBP13.34□□□□□ -0.27
LIME1-202ENST00000444951 KIAA0141Q14154 515 aaPredicted RBP13.34□□□□□ -0.27
LIME1-202ENST00000444951 MLANAQ16655 118 aa13.34□□□□□ -0.27
LIME1-202ENST00000444951 Q5BKY6 102 aa13.34□□□□□ -0.27
LIME1-202ENST00000444951 OR8G2PQ6IF36 304 aa13.34□□□□□ -0.27
LIME1-202ENST00000444951 ETV3LQ6ZN32 361 aa13.34□□□□□ -0.27
LIME1-202ENST00000444951 NOXA1Q86UR1 476 aa13.34□□□□□ -0.27
LIME1-202ENST00000444951 FAM223AQ8IWN6 122 aa13.34□□□□□ -0.27
LIME1-202ENST00000444951 RNF152Q8N8N0 203 aa13.34□□□□□ -0.27
LIME1-202ENST00000444951 KLHL30-AS1Q8NEE0 82 aa13.34□□□□□ -0.27
LIME1-202ENST00000444951 OR2T35Q8NGX2 323 aa13.34□□□□□ -0.27
LIME1-202ENST00000444951 THAP6Q8TBB0 222 aa13.34□□□□□ -0.27
LIME1-202ENST00000444951 RANGRFQ9HD47 186 aaPredicted RBP13.34□□□□□ -0.27
LIME1-202ENST00000444951 MBD2Q9UBB5 411 aa13.34□□□□□ -0.27
LIME1-202ENST00000444951 TSSC4Q9Y5U2 329 aaPredicted RBP13.34□□□□□ -0.27
LIME1-202ENST00000444951 TRAV14DV4A0A0A6YYC5 116 aa13.33□□□□□ -0.28
LIME1-202ENST00000444951 ANKRD34BA5PLL1 514 aa13.33□□□□□ -0.28
LIME1-202ENST00000444951 E5RGE8 158 aa13.33□□□□□ -0.28
LIME1-202ENST00000444951 G3V4G9 280 aa13.33□□□□□ -0.28
LIME1-202ENST00000444951 TSC22D2O75157 780 aa13.33□□□□□ -0.28
LIME1-202ENST00000444951 CCNKO75909 580 aa13.33□□□□□ -0.28
LIME1-202ENST00000444951 BRI3O95415 125 aa13.33□□□□□ -0.28
LIME1-202ENST00000444951 TAS2R30P59541 319 aa13.33□□□□□ -0.28
LIME1-202ENST00000444951 PRSS54Q6PEW0 395 aa13.33□□□□□ -0.28
LIME1-202ENST00000444951 UBAC2Q8NBM4 344 aa13.33□□□□□ -0.28
LIME1-202ENST00000444951 DCUN1D4Q92564 292 aa13.33□□□□□ -0.28
LIME1-202ENST00000444951 USMG5Q96IX5 58 aa13.33□□□□□ -0.28
LIME1-202ENST00000444951 RNF126Q9BV68 326 aa13.33□□□□□ -0.28
LIME1-202ENST00000444951 C11orf1Q9H5F2 150 aa13.33□□□□□ -0.28
LIME1-202ENST00000444951 NOTCH3Q9UM47 2321 aa13.32□□□□□ -0.28
LIME1-202ENST00000444951 K7EIM0 57 aa13.32□□□□□ -0.28
LIME1-202ENST00000444951 CORTO00230 105 aa13.32□□□□□ -0.28
LIME1-202ENST00000444951 MYOZ3Q8TDC0 251 aa13.32□□□□□ -0.28
LIME1-202ENST00000444951 RNASEH2CQ8TDP1 164 aaKnown RBP13.32□□□□□ -0.28
LIME1-202ENST00000444951 ASB13Q8WXK3 278 aa13.32□□□□□ -0.28
LIME1-202ENST00000444951 EEF1AKMT3Q96AZ1 226 aa13.32□□□□□ -0.28
LIME1-202ENST00000444951 UBE2E2Q96LR5 201 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms