RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 C6orf62Q9GZU0 229 aaPredicted RBP14.05□□□□□ -0.16
CCDC78-204ENST00000439619 RABL2AQ9UBK7 228 aaPredicted RBP14.05□□□□□ -0.16
CCDC78-204ENST00000439619 RABL2BQ9UNT1 228 aa14.05□□□□□ -0.16
CCDC78-204ENST00000439619 F8W735 103 aaPredicted RBP14.04□□□□□ -0.16
CCDC78-204ENST00000439619 I3L2K1 104 aa14.04□□□□□ -0.16
CCDC78-204ENST00000439619 CORTO00230 105 aa14.04□□□□□ -0.16
CCDC78-204ENST00000439619 SCGB2A1O75556 95 aa14.04□□□□□ -0.16
CCDC78-204ENST00000439619 CMC4P56277 68 aaPredicted RBP14.04□□□□□ -0.16
CCDC78-204ENST00000439619 TMEM116Q8NCL8 245 aa14.04□□□□□ -0.16
CCDC78-204ENST00000439619 DUSP18Q8NEJ0 188 aa14.04□□□□□ -0.16
CCDC78-204ENST00000439619 TP53RKQ96S44 253 aa14.04□□□□□ -0.16
CCDC78-204ENST00000439619 GINS3Q9BRX5 216 aa14.04□□□□□ -0.16
CCDC78-204ENST00000439619 SMPXQ9UHP9 88 aa14.04□□□□□ -0.16
CCDC78-204ENST00000439619 C14orf166Q9Y224 244 aaKnown RBP14.04□□□□□ -0.16
CCDC78-204ENST00000439619 IGHV3OR16-8A0A075B7F1 116 aa14.03□□□□□ -0.16
CCDC78-204ENST00000439619 TRAV14DV4A0A0A6YYC5 116 aa14.03□□□□□ -0.16
CCDC78-204ENST00000439619 ZNF207O43670 478 aaKnown RBP14.03□□□□□ -0.16
CCDC78-204ENST00000439619 JTBO76095 146 aa14.03□□□□□ -0.16
CCDC78-204ENST00000439619 CD74P04233 296 aa14.03□□□□□ -0.16
CCDC78-204ENST00000439619 CD5P06127 495 aa14.03□□□□□ -0.16
CCDC78-204ENST00000439619 NXF2Q9GZY0 626 aaKnown RBP14.03□□□□□ -0.16
CCDC78-204ENST00000439619 IGHV7-4-1A0A0J9YVY3 117 aa14.02□□□□□ -0.17
CCDC78-204ENST00000439619 DISC1C4P0D8 188 aa14.02□□□□□ -0.17
CCDC78-204ENST00000439619 UBE2CO00762 179 aa14.02□□□□□ -0.17
CCDC78-204ENST00000439619 CTSDP07339 412 aaPredicted RBP14.02□□□□□ -0.17
CCDC78-204ENST00000439619 HOXA1P49639 335 aaPredicted RBP14.02□□□□□ -0.17
CCDC78-204ENST00000439619 OR13C8Q8NGS7 320 aa14.02□□□□□ -0.17
CCDC78-204ENST00000439619 RHPN1-AS1Q9BWJ2 59 aa14.02□□□□□ -0.17
CCDC78-204ENST00000439619 UBQLN2Q9UHD9 624 aa14.02□□□□□ -0.17
CCDC78-204ENST00000439619 TEX13DA0A0J9YY54 714 aaPredicted RBP14.01□□□□□ -0.17
CCDC78-204ENST00000439619 INS-IGF2F8WCM5 200 aa14.01□□□□□ -0.17
CCDC78-204ENST00000439619 ST8SIA3O43173 380 aa14.01□□□□□ -0.17
CCDC78-204ENST00000439619 NOL3O60936 208 aaKnown RBP14.01□□□□□ -0.17
CCDC78-204ENST00000439619 IGKV1-5P01602 117 aa14.01□□□□□ -0.17
CCDC78-204ENST00000439619 PAFAH1B2P68402 229 aa14.01□□□□□ -0.17
CCDC78-204ENST00000439619 SP6Q3SY56 376 aa14.01□□□□□ -0.17
CCDC78-204ENST00000439619 SPINK9Q5DT21 86 aa14.01□□□□□ -0.17
CCDC78-204ENST00000439619 Q6ZWC4 215 aa14.01□□□□□ -0.17
CCDC78-204ENST00000439619 FAM219AQ8IW50 185 aa14.01□□□□□ -0.17
CCDC78-204ENST00000439619 STPG3Q8N7X2 389 aa14.01□□□□□ -0.17
CCDC78-204ENST00000439619 OR4D10Q8NGI6 311 aa14.01□□□□□ -0.17
CCDC78-204ENST00000439619 MARCH1Q8TCQ1 289 aa14.01□□□□□ -0.17
CCDC78-204ENST00000439619 RAB2BQ8WUD1 216 aa14.01□□□□□ -0.17
CCDC78-204ENST00000439619 OR10C1Q96KK4 312 aa14.01□□□□□ -0.17
CCDC78-204ENST00000439619 TP53TG1Q9Y2A0 90 aa14.01□□□□□ -0.17
CCDC78-204ENST00000439619 A0A0B4J293 547 aa14□□□□□ -0.17
CCDC78-204ENST00000439619 KIR2DL5BA0A0G2JN68 375 aa14□□□□□ -0.17
CCDC78-204ENST00000439619 KIR2DL5BA0A0G2JPC4 375 aa14□□□□□ -0.17
CCDC78-204ENST00000439619 IGHV3-48P01763 117 aa14□□□□□ -0.17
CCDC78-204ENST00000439619 UCP1P25874 307 aa14□□□□□ -0.17
CCDC78-204ENST00000439619 ALDH3B2P48448 385 aa14□□□□□ -0.17
CCDC78-204ENST00000439619 IL18Q14116 193 aa14□□□□□ -0.17
CCDC78-204ENST00000439619 SURF2Q15527 256 aaPredicted RBP14□□□□□ -0.17
CCDC78-204ENST00000439619 IZUMO4Q1ZYL8 232 aa14□□□□□ -0.17
CCDC78-204ENST00000439619 CLVS1Q8IUQ0 354 aaPredicted RBP14□□□□□ -0.17
CCDC78-204ENST00000439619 KIR2DL5AQ8N109 375 aa14□□□□□ -0.17
CCDC78-204ENST00000439619 KIR2DL5BQ8NHK3 375 aa14□□□□□ -0.17
CCDC78-204ENST00000439619 DIRAS2Q96HU8 199 aa14□□□□□ -0.17
CCDC78-204ENST00000439619 OVOL2Q9BRP0 275 aa14□□□□□ -0.17
CCDC78-204ENST00000439619 MIXL1Q9H2W2 232 aa14□□□□□ -0.17
CCDC78-204ENST00000439619 RYR3Q15413 4870 aa13.99□□□□□ -0.17
CCDC78-204ENST00000439619 CTDSP2O14595 271 aa13.99□□□□□ -0.17
CCDC78-204ENST00000439619 CHEK1O14757 476 aa13.99□□□□□ -0.17
CCDC78-204ENST00000439619 AKAIN1P0CW23 69 aa13.99□□□□□ -0.17
CCDC78-204ENST00000439619 ETV6P41212 452 aa13.99□□□□□ -0.17
CCDC78-204ENST00000439619 DHODHQ02127 395 aa13.99□□□□□ -0.17
CCDC78-204ENST00000439619 SMIM4Q8WVI0 70 aa13.99□□□□□ -0.17
CCDC78-204ENST00000439619 GALNT14Q96FL9 552 aa13.99□□□□□ -0.17
CCDC78-204ENST00000439619 RNF2Q99496 336 aa13.99□□□□□ -0.17
CCDC78-204ENST00000439619 BCL7BQ9BQE9 202 aa13.99□□□□□ -0.17
CCDC78-204ENST00000439619 TMEM222Q9H0R3 208 aa13.99□□□□□ -0.17
CCDC78-204ENST00000439619 TMEM231Q9H6L2 316 aa13.99□□□□□ -0.17
CCDC78-204ENST00000439619 SPRY2O43597 315 aa13.98□□□□□ -0.17
CCDC78-204ENST00000439619 P0C879 139 aa13.98□□□□□ -0.17
CCDC78-204ENST00000439619 TMBIM6P55061 237 aa13.98□□□□□ -0.17
CCDC78-204ENST00000439619 SPCS2Q15005 226 aa13.98□□□□□ -0.17
CCDC78-204ENST00000439619 ODF3L2Q3SX64 289 aa13.98□□□□□ -0.17
CCDC78-204ENST00000439619 ZNF600Q6ZNG1 722 aa13.98□□□□□ -0.17
CCDC78-204ENST00000439619 PRRT1Q99946 306 aa13.98□□□□□ -0.17
CCDC78-204ENST00000439619 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.98□□□□□ -0.17
CCDC78-204ENST00000439619 CCDC59Q9P031 241 aaKnown RBP13.98□□□□□ -0.17
CCDC78-204ENST00000439619 CACFD1Q9UGQ2 172 aa13.98□□□□□ -0.17
CCDC78-204ENST00000439619 IGHV3-49A0A0A0MS15 119 aa13.97□□□□□ -0.17
CCDC78-204ENST00000439619 CTDSPLO15194 276 aa13.97□□□□□ -0.17
CCDC78-204ENST00000439619 CDS2O95674 445 aa13.97□□□□□ -0.17
CCDC78-204ENST00000439619 OPRK1P41145 380 aa13.97□□□□□ -0.17
CCDC78-204ENST00000439619 SPCS3P61009 180 aa13.97□□□□□ -0.17
CCDC78-204ENST00000439619 RBPMSQ93062 196 aaKnown RBP13.97□□□□□ -0.17
CCDC78-204ENST00000439619 SCGB3A2Q96PL1 93 aa13.97□□□□□ -0.17
CCDC78-204ENST00000439619 NAA60Q9H7X0 242 aa13.97□□□□□ -0.17
CCDC78-204ENST00000439619 RSL24D1Q9UHA3 163 aaKnown RBP13.97□□□□□ -0.17
CCDC78-204ENST00000439619 IGKV3-7A0A075B6H7 116 aa13.96□□□□□ -0.17
CCDC78-204ENST00000439619 RPS10-NUDT3A0A1W2PQS6 291 aa13.96□□□□□ -0.17
CCDC78-204ENST00000439619 OR5AC1P0C628 307 aa13.96□□□□□ -0.17
CCDC78-204ENST00000439619 TFPI2P48307 235 aa13.96□□□□□ -0.17
CCDC78-204ENST00000439619 TOMM20LQ6UXN7 152 aa13.96□□□□□ -0.17
CCDC78-204ENST00000439619 TCF24Q7RTU0 167 aa13.96□□□□□ -0.17
CCDC78-204ENST00000439619 WFDC3Q8IUB2 231 aa13.96□□□□□ -0.17
CCDC78-204ENST00000439619 TMEM217Q8N7C4 229 aa13.96□□□□□ -0.17
CCDC78-204ENST00000439619 OR52E5Q8NH55 327 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms